Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.2e-166 589.7 287 100.0
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.5e-166 587.8 287 99.7
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 1.7e-152 542.7 285 91.2
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 1.4e-151 539.7 287 89.9
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 4.7e-147 524.6 286 87.4
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 1.8e-146 522.7 286 87.1
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 5.2e-146 521.2 287 87.1
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 6.8e-146 520.8 285 87.0
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 2.0e-145 519.2 282 89.0
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 3.4e-145 518.5 287 83.6
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 4.1e-143 511.5 287 84.3
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 4.1e-143 511.5 287 86.1
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 7.0e-143 510.8 287 84.0
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 3.5e-142 508.4 284 84.5
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 4.5e-142 508.1 284 84.5
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 4.5e-142 508.1 287 83.3
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 1.3e-141 506.5 284 85.6
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 1.3e-141 506.5 287 84.3
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 8.6e-141 503.8 287 82.9
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 1.5e-140 503.1 284 83.8
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 1.9e-140 502.7 294 81.6
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 1.9e-140 502.7 284 83.8
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 1.9e-140 502.7 287 82.2
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 7.2e-140 500.7 287 81.9
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 1.6e-139 499.6 284 83.1
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 4.7e-139 498.0 284 83.8
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 2.3e-138 495.7 284 82.4
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 5.2e-138 494.6 284 82.4
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 1.2e-137 493.4 298 79.2
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 1.5e-137 493.0 287 78.7
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 7.5e-137 490.7 287 79.4
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 9.8e-137 490.3 285 81.8
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 9.8e-137 490.3 287 81.9
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.3e-136 490.0 285 81.4
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 1.7e-136 489.6 287 82.2
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.7e-136 489.6 285 82.1
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 2.8e-136 488.8 287 78.7
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 4.9e-136 488.0 271 86.0
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 6.3e-136 487.6 287 81.9
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 6.3e-136 487.6 285 82.5
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 1.4e-135 486.5 287 80.1
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 7.0e-135 484.2 309 76.7
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 2.0e-134 482.6 285 81.1
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 3.5e-134 481.9 282 81.2
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 4.5e-134 481.5 284 80.3
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 5.9e-134 481.1 284 79.6
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 5.9e-134 481.1 284 79.9
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 7.8e-134 480.7 287 80.8
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 7.8e-134 480.7 287 80.8
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.3e-133 479.9 287 80.5
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 1.7e-133 479.6 284 79.2
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.7e-133 479.6 288 77.4
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.7e-133 479.6 287 77.4
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 2.3e-133 479.2 290 77.2
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 5.0e-133 478.0 287 76.7
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 6.6e-133 477.6 285 78.9
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 8.6e-133 477.2 285 78.9
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 1.9e-132 476.1 284 79.2
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 1.9e-132 476.1 287 76.3
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 1.9e-132 476.1 325 71.1
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 3.3e-132 475.3 284 78.9
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 3.3e-132 475.3 286 78.7
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 3.3e-132 475.3 288 76.7
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 1.2e-131 473.4 283 76.7
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 2.1e-131 472.6 286 79.4
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 4.7e-131 471.5 287 77.0
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 6.1e-131 471.1 287 75.3
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 8.0e-131 470.7 288 77.4
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 1.8e-130 469.5 281 80.4
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.8e-130 469.5 278 78.4
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 5.2e-130 468.0 286 77.3
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 5.2e-130 468.0 285 77.2
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 2.6e-129 465.7 285 77.5
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 3.4e-129 465.3 282 78.7
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 4.4e-129 464.9 287 74.6
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 9.8e-129 463.8 287 74.9
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 6.4e-128 461.1 287 74.6
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.0e-126 456.1 286 72.4
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 2.7e-126 455.7 288 74.0
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 7.8e-126 454.1 286 72.4
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 8.6e-125 450.7 269 79.2
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 3.3e-124 448.7 269 78.4
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 3.3e-124 448.7 269 78.4
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 8.0e-123 444.1 274 74.5
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 8.0e-123 444.1 286 72.4
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 1.4e-122 443.4 283 72.1
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 6.8e-122 441.0 285 70.9
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 2.0e-121 439.5 269 75.1
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.3e-120 436.8 268 76.1
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.2e-115 420.2 262 73.7
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 3.6e-115 418.7 246 80.5
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 5.8e-113 411.4 280 70.4
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 1.6e-110 403.3 246 74.8
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 2.7e-110 402.5 280 68.6
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 4.6e-110 401.7 283 67.5
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 2.3e-109 399.4 239 81.2
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 3.3e-108 395.6 285 66.7
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 5.8e-105 384.8 213 86.9
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 9.6e-92 340.9 175 92.6
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 6.2e-91 338.2 268 60.4
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 1.9e-76 290.0 260 50.0
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 9.0e-74 281.2 259 52.1
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.9e-69 265.8 253 50.2
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 5.3e-66 255.4 258 47.7
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.1e-58 229.2 151 72.2
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 5.7e-52 208.8 110 92.7
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 2.7e-46 189.9 304 41.4
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 1.0e-45 188.0 105 81.0
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 3.0e-45 186.4 253 39.1
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.3e-43 181.0 194 51.5
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 4.5e-41 172.6 163 58.9
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 4.4e-36 156.0 94 75.5
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 5.7e-36 155.6 95 74.7
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 3.5e-33 146.4 77 90.9
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 1.0e-32 144.8 88 76.1
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 6.6e-24 115.5 67 80.6
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 1.9e-23 114.0 66 80.3
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 9.8e-12 75.1 41 73.2
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.3e-08 63.9 48 70.8


User provided reference genes

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