Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000215 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 5.5e-47 190.7 98 100.0
CSS0038855 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 5.3e-18 94.4 98 53.1
CAN.G411.50 Capsicum annuum HOM05D005059 ORTHO05D004248 2.0e-17 92.4 96 61.5
Oeu060173.1 Olea europaea HOM05D005059 ORTHO05D004248 3.5e-17 91.7 99 54.5
Oeu040922.1 Olea europaea HOM05D005059 ORTHO05D004248 4.5e-17 91.3 98 56.1
Migut.H01411 Erythranthe guttata HOM05D005059 ORTHO05D004248 5.9e-17 90.9 96 52.1
Glyma.05G161100 Glycine max HOM05D005059 ORTHO05D004248 1.3e-16 89.7 83 59.0
Phvul.002G241108 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 1.3e-16 89.7 92 54.3
SalBow7G3765 Salvia bowleyana HOM05D005059 ORTHO05D004248 6.5e-16 87.4 98 50.0
Rhsim13G0187800 Rhododendron simsii HOM05D005059 ORTHO05D004248 8.5e-16 87.0 100 54.0
Glyma.08G118500 Glycine max HOM05D005059 ORTHO05D004248 1.5e-15 86.3 98 54.1
DCAR_027980 Daucus carota HOM05D005059 ORTHO05D004248 1.9e-15 85.9 104 54.8
Oeu060178.1 Olea europaea HOM05D005059 ORTHO05D004248 1.9e-15 85.9 98 51.0
Oeu043118.1 Olea europaea HOM05D005059 ORTHO05D004248 2.5e-15 85.5 98 52.0
Psat7g068640 Pisum sativum HOM05D005059 ORTHO05D004248 7.2e-15 84.0 102 47.1
Lsat_1_v5_gn_7_25601 Lactuca sativa HOM05D005059 ORTHO05D004248 9.4e-15 83.6 98 54.1
PGSC0003DMG400028485 Solanum tuberosum HOM05D005059 ORTHO05D004248 9.4e-15 83.6 98 56.1
Hma1.2p1_0113F.1_g055120 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 1.6e-14 82.8 93 51.6
Cc02_g15600 Coffea canephora HOM05D005059 ORTHO05D004248 2.1e-14 82.4 99 52.5
Thecc.06G165400 Theobroma cacao HOM05D005059 ORTHO05D004248 3.6e-14 81.6 98 50.0
Haze_06169 Corylus avellana HOM05D005059 ORTHO05D004248 4.7e-14 81.3 99 49.5
DCAR_005145 Daucus carota HOM05D005059 ORTHO05D004248 4.7e-14 81.3 103 53.4
COL.COLO4_31233 Corchorus olitorius HOM05D005059 ORTHO05D004248 6.1e-14 80.9 102 47.1
Rhsim13G0187700 Rhododendron simsii HOM05D005059 ORTHO05D004248 6.1e-14 80.9 100 57.0
CiPaw.09G073100 Carya illinoinensis HOM05D005059 ORTHO05D004248 1.0e-13 80.1 99 49.5
Nn3g21078 Nelumbo nucifera HOM05D005059 ORTHO05D004248 1.0e-13 80.1 98 50.0
Sopen02g021130 Solanum pennellii HOM05D005059 ORTHO05D004248 1.0e-13 80.1 88 59.1
QL05p049931 Quercus lobata HOM05D005059 ORTHO05D004248 1.4e-13 79.7 97 49.5
TPR.G6728 Trifolium pratense HOM05D005059 ORTHO05D004248 2.3e-13 79.0 103 47.6
TAR626G0600 Trochodendron aralioides HOM05D005059 ORTHO05D004248 3.0e-13 78.6 91 51.6
SalBow8G0022 Salvia bowleyana HOM05D005059 ORTHO05D004248 4.0e-13 78.2 65 66.2
arahy.Tifrunner.gnm1.ann1.YNVN02 Arachis hypogaea HOM05D005059 ORTHO05D004248 5.2e-13 77.8 100 46.0
MSTRG.13233 Avicennia marina HOM05D005059 ORTHO05D004248 5.2e-13 77.8 98 50.0
Medtr8g087390 Medicago truncatula HOM05D005059 ORTHO05D004248 5.2e-13 77.8 98 49.0
Dinv32337 Davidia involucrata HOM05D005059 ORTHO05D004248 8.8e-13 77.0 87 55.2
Gohir.A05G153400 Gossypium hirsutum HOM05D005059 ORTHO05D004248 1.2e-12 76.6 99 48.5
Phvul.006G173000 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 1.2e-12 76.6 96 52.1
TAR624G0770 Trochodendron aralioides HOM05D005059 ORTHO05D004248 1.2e-12 76.6 74 55.4
Lj4g0014521 Lotus japonicus HOM05D005059 ORTHO05D004248 1.5e-12 76.3 91 49.5
arahy.Tifrunner.gnm1.ann1.YXRF57 Arachis hypogaea HOM05D005059 ORTHO05D004248 2.0e-12 75.9 103 43.7
TAR624G0872 Trochodendron aralioides HOM05D005059 ORTHO05D004248 2.0e-12 75.9 91 48.4
Ca_00473_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 2.6e-12 75.5 98 43.9
MBI06_g16696_MAGBIO Magnolia biondii HOM05D005059 ORTHO05D004248 2.6e-12 75.5 91 56.0
MSTRG.7430 Avicennia marina HOM05D005059 ORTHO05D004248 4.4e-12 74.7 99 46.5
Cfa000656 Carpinus fangiana HOM05D005059 ORTHO05D004248 4.4e-12 74.7 99 45.5
Glyma.13G226600 Glycine max HOM05D005059 ORTHO05D004248 5.7e-12 74.3 95 49.5
Gohir.D05G156000 Gossypium hirsutum HOM05D005059 ORTHO05D004248 5.7e-12 74.3 99 47.5
Gorai.009G160500 Gossypium raimondii HOM05D005059 ORTHO05D004248 5.7e-12 74.3 99 47.5
Prupe.4G067000 Prunus persica HOM05D005059 ORTHO05D004248 5.7e-12 74.3 91 48.4
Nn6g34461 Nelumbo nucifera HOM05D005059 ORTHO05D004248 7.5e-12 73.9 94 52.1
Ca_17896_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 9.8e-12 73.6 89 46.1
Eucgr.D00466 Eucalyptus grandis HOM05D005059 ORTHO05D004248 1.3e-11 73.2 101 50.5
Medtr2g016800 Medicago truncatula HOM05D005059 ORTHO05D004248 2.2e-11 72.4 104 46.2
MD10G1275500 Malus domestica HOM05D005059 ORTHO05D004248 2.8e-11 72.0 89 43.8
PGR042G3020 Punica granatum HOM05D005059 ORTHO05D004248 3.7e-11 71.6 101 45.5
TAR627G0439 Trochodendron aralioides HOM05D005059 ORTHO05D004248 3.7e-11 71.6 91 49.5
Dinv12752 Davidia involucrata HOM05D005059 ORTHO05D004248 4.8e-11 71.2 65 58.5
MD00G1009200 Malus domestica HOM05D005059 ORTHO05D004248 4.8e-11 71.2 90 45.6
MD00G1221100 Malus domestica HOM05D005059 ORTHO05D004248 4.8e-11 71.2 90 45.6
Ciclev10018148m.g Citrus clementina HOM05D005059 ORTHO05D004248 1.1e-10 70.1 101 49.5
MBI07_g00460_MAGBIO Magnolia biondii HOM05D005059 ORTHO05D004248 1.1e-10 70.1 51 70.6
Sabra11G0055200 Salix brachista HOM05D005059 ORTHO05D004248 1.4e-10 69.7 108 44.4
Gorai.010G161500 Gossypium raimondii HOM05D005059 ORTHO05D004248 1.8e-10 69.3 101 46.5
RcHm_v2.0_Chr5g0011661 Rosa chinensis HOM05D005059 ORTHO05D004248 5.4e-10 67.8 103 46.6
Gohir.D06G138900 Gossypium hirsutum HOM05D005059 ORTHO05D004248 7.0e-10 67.4 101 46.5
Psat1g194640 Pisum sativum HOM05D005059 ORTHO05D004248 7.0e-10 67.4 105 43.8
Potri.004G061300 Populus trichocarpa HOM05D005059 ORTHO05D004248 7.0e-10 67.4 102 43.1
AT1G29290 Arabidopsis thaliana HOM05D005059 ORTHO05D004248 9.1e-10 67.0 100 42.0
Manes.17G059300 Manihot esculenta HOM05D005059 ORTHO05D004248 9.1e-10 67.0 101 45.5
AL1G43080 Arabidopsis lyrata HOM05D005059 ORTHO05D004248 2.0e-09 65.9 100 41.0
Manes.16G042800 Manihot esculenta HOM05D005059 ORTHO05D004248 2.7e-09 65.5 96 44.8
Sabra04G0040600 Salix brachista HOM05D005059 ORTHO05D004248 2.7e-09 65.5 54 61.1
CARHR028610 Cardamine hirsuta HOM05D005059 ORTHO05D004248 3.5e-09 65.1 83 43.4
Sp1g25220 Schrenkiella parvula HOM05D005059 ORTHO05D004248 3.5e-09 65.1 101 42.6
A09p37060 Brassica napus HOM05D005059 ORTHO05D004248 4.5e-09 64.7 100 42.0
BraA09t39221Z Brassica rapa HOM05D005059 ORTHO05D004248 4.5e-09 64.7 100 42.0
Gohir.A06G133800 Gossypium hirsutum HOM05D005059 ORTHO05D004248 4.5e-09 64.7 101 45.5
Potri.011G070500 Populus trichocarpa HOM05D005059 ORTHO05D004248 4.5e-09 64.7 107 43.0
BcaB07g32517 Brassica carinata HOM05D005059 ORTHO05D004248 7.7e-09 63.9 100 42.0
SGA_v2.0_scaffold1G00085 Striga asiatica HOM05D005059 ORTHO05D004248 7.7e-09 63.9 106 42.5
BcaB03g12151 Brassica carinata HOM05D005059 ORTHO05D004248 1.0e-08 63.5 71 47.9
A07p10740 Brassica napus HOM05D005059 ORTHO05D004248 1.0e-08 63.5 83 42.2
BraA07t28869Z Brassica rapa HOM05D005059 ORTHO05D004248 1.0e-08 63.5 83 42.2
BcaC05g26955 Brassica carinata HOM05D005059 ORTHO05D004248 1.7e-08 62.8 100 42.0
C05p28050 Brassica napus HOM05D005059 ORTHO05D004248 1.7e-08 62.8 100 42.0
BolC5t31533H Brassica oleracea HOM05D005059 ORTHO05D004248 1.7e-08 62.8 100 42.0
Migut.M01008 Erythranthe guttata HOM05D005059 ORTHO05D004248 1.7e-08 62.8 95 48.4
FvH4_3g07300 Fragaria vesca HOM05D005059 ORTHO05D004248 1.7e-08 62.8 94 45.7
Lj6g0009726 Lotus japonicus HOM05D005059 ORTHO05D004248 1.7e-08 62.8 95 44.2
Sed0013946 Sechium edule HOM05D005059 ORTHO05D004248 1.7e-08 62.8 71 49.3
AUR62039479 Chenopodium quinoa HOM05D005059 ORTHO05D004248 2.2e-08 62.4 84 47.6
Thhalv10009585m.g Eutrema salsugineum HOM05D005059 ORTHO05D004248 2.2e-08 62.4 83 42.2
Glyma.15G085800 Glycine max HOM05D005059 ORTHO05D004248 2.2e-08 62.4 89 43.8
Lalb_Chr15g0086331 Lupinus albus HOM05D005059 ORTHO05D004248 2.2e-08 62.4 76 48.7
BcaB03g13892 Brassica carinata HOM05D005059 ORTHO05D004248 2.9e-08 62.0 100 41.0
Dinv15004 Davidia involucrata HOM05D005059 ORTHO05D004248 2.9e-08 62.0 74 54.1
FAN16G0464 Fragaria x ananassa HOM05D005059 ORTHO05D004248 2.9e-08 62.0 94 45.7
Aa31LG6G6240 Aethionema arabicum HOM05D005059 ORTHO05D004248 3.8e-08 61.6 103 39.8
BcaC06g35423 Brassica carinata HOM05D005059 ORTHO05D004248 3.8e-08 61.6 86 43.0
C07p16340 Brassica napus HOM05D005059 ORTHO05D004248 3.8e-08 61.6 86 43.0
BolC7t42128H Brassica oleracea HOM05D005059 ORTHO05D004248 3.8e-08 61.6 86 43.0
DCAR_027979 Daucus carota HOM05D005059 ORTHO05D004248 3.8e-08 61.6 107 41.1
FAN21G0043 Fragaria x ananassa HOM05D005059 ORTHO05D004248 3.8e-08 61.6 94 45.7
FAN25G1124 Fragaria x ananassa HOM05D005059 ORTHO05D004248 3.8e-08 61.6 94 45.7
Atru.chr10.1568 Acer truncatum HOM05D005059 ORTHO05D004248 6.5e-08 60.8 84 47.6
FAN11G2282 Fragaria x ananassa HOM05D005059 ORTHO05D004248 6.5e-08 60.8 94 44.7
Oeu061362.1 Olea europaea HOM05D005059 ORTHO05D004248 6.5e-08 60.8 96 38.5
THA.LOC104820608 Tarenaya hassleriana HOM05D005059 ORTHO05D004248 6.5e-08 60.8 74 47.3
Actinidia18806 Actinidia chinensis HOM05D005059 ORTHO05D004248 8.5e-08 60.5 79 46.8
A08p25180 Brassica napus HOM05D005059 ORTHO05D004248 4.2e-07 58.2 93 37.6
BraA08t34472Z Brassica rapa HOM05D005059 ORTHO05D004248 4.2e-07 58.2 93 37.6
Ah.14g086980 Amaranthus hybridus HOM05D005059 ORTHO05D004248 5.5e-07 57.8 61 60.7
BcaC01g00093 Brassica carinata HOM05D005059 ORTHO05D004248 7.2e-07 57.4 93 37.6
C03p75700 Brassica napus HOM05D005059 ORTHO05D004248 7.2e-07 57.4 93 37.6
BolC3t19830H Brassica oleracea HOM05D005059 ORTHO05D004248 7.2e-07 57.4 93 37.6
Nitab4.5_0000788g0070 Nicotiana tabacum HOM05D005059 ORTHO05D004248 9.4e-07 57.0 99 38.4
CDE02G4707 Ceratophyllum demersum HOM05D001096 ORTHO05D001629 1.2e-06 56.6 89 43.8
Rhsim04G0027000 Rhododendron simsii HOM05D002453 ORTHO05D008746 2.1e-06 55.8 84 38.1
ClCG01G023900 Citrullus lanatus HOM05D005059 ORTHO05D004248 4.7e-06 54.7 86 47.7
TWI53G1149 Tripterygium wilfordii HOM05D005059 ORTHO05D004248 4.7e-06 54.7 93 44.1
TAR629G2882 Trochodendron aralioides HOM05D005059 ORTHO05D004248 4.7e-06 54.7 85 40.0
TPR.G4530 Trifolium pratense HOM05D005059 ORTHO05D004248 8.0e-06 53.9 59 50.8


User provided reference genes

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