Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000200 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 3.7e-139 498.4 297 100.0
CSS0024962 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 2.1e-73 280.0 334 61.1
CSS0021643 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 8.2e-70 268.1 350 57.4
CSS0016677 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 1.4e-69 267.3 333 62.5
CSS0006434 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 2.6e-68 263.1 358 58.4
CSS0037911 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 5.0e-67 258.8 358 57.8
CSS0012445 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.5e-67 258.5 344 60.2
CSS0035229 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 8.5e-67 258.1 358 57.8
CSS0025634 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 1.4e-66 257.3 358 57.3
CSS0003880 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.6e-44 184.1 312 50.3
CSS0014068 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.0e-43 181.4 366 46.7
CSS0038417 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.0e-43 181.4 202 54.5
CSS0032210 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.3e-43 181.0 202 54.5
CSS0041897 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 6.5e-43 178.7 200 54.0
CSS0004819 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 8.5e-43 178.3 202 54.0
CSS0023106 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.1e-42 177.9 202 53.5
CSS0041735 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.9e-42 177.2 200 53.5
CSS0019430 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 4.2e-42 176.0 202 53.0
CSS0026395 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.2e-41 174.5 200 53.0
CSS0035773 Camellia sinensis var. sinensis HOM05D012925 ORTHO05D004773 1.2e-41 174.5 204 52.9
CSS0043688 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.8e-20 102.1 174 37.4
CSS0006298 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.3e-19 100.5 174 36.8
CSS0047046 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.0e-19 99.4 174 36.8
CSS0012507 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 8.6e-19 98.6 174 36.8
CSS0016254 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 1.9e-18 97.4 174 36.2
CSS0044930 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D004773 2.5e-18 97.1 174 36.2
CSS0007642 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.3e-18 95.5 174 37.4
CSS0011546 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.7e-14 83.2 201 31.3
CSS0041777 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.9e-14 82.8 171 33.9
CSS0008641 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.1e-13 81.6 187 32.6
CSS0024773 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.1e-13 81.6 188 34.0
CSS0046621 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.4e-13 81.3 58 69.0
CSS0024514 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.4e-13 80.5 185 32.4
CSS0046475 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.1e-13 79.7 190 32.1
CSS0016639 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.0e-13 79.0 203 30.5
CSS0024954 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.2e-13 78.6 48 79.2
CSS0008128 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-12 77.0 48 77.1
CSS0035044 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-12 77.0 48 77.1
CSS0040930 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-12 77.0 194 30.4
Rhsim05G0213300 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.3e-11 73.9 167 31.7
CSS0021123 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.9e-11 73.2 203 31.5
CSS0020853 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.6e-11 72.4 211 31.8
CSS0041074 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-10 70.5 190 29.5
CSS0018197 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.3e-10 69.7 202 30.2
CSS0035306 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.2e-09 68.2 149 30.9
Atru.chr5.2454 Acer truncatum HOM05D003511 ORTHO05D004403 2.8e-09 67.0 172 32.0
CSS0015620 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002132 6.2e-09 65.9 115 40.0
FvH4_3g31442 Fragaria vesca HOM05D000045 ORTHO05D000067 1.8e-08 64.3 166 30.7
Atru.chr3.3093 Acer truncatum HOM05D000045 ORTHO05D000067 6.8e-08 62.4 169 30.8
COL.COLO4_25082 Corchorus olitorius HOM05D000045 ORTHO05D004773 3.7e-06 56.6 200 27.5


User provided reference genes

Program Settings