Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000199 Camellia sinensis var. sinensis HOM05D009126 ORTHO05D011285 2.1e-188 662.1 321 100.0
Rhsim06G0003900 Rhododendron simsii HOM05D009126 ORTHO05D011285 6.9e-14 82.4 52 80.8
Hma1.2p1_0699F.1_g205690 Hydrangea macrophylla HOM05D009126 ORTHO05D011285 3.8e-12 76.6 52 80.8
CiPaw.07G134400 Carya illinoinensis HOM05D009126 ORTHO05D011285 1.4e-11 74.7 46 84.8
vmacro21775 Vaccinium macrocarpon HOM05D009126 ORTHO05D011285 1.9e-11 74.3 46 82.6
Manes.18G002601 Manihot esculenta HOM05D009126 ORTHO05D011285 3.5e-10 70.1 46 80.4
Cfa014130 Carpinus fangiana HOM05D009126 ORTHO05D011285 1.8e-09 67.8 40 85.0
Migut.N02982 Erythranthe guttata HOM05D009126 ORTHO05D011285 1.8e-09 67.8 52 63.5
Migut.O00885 Erythranthe guttata HOM05D009126 ORTHO05D011285 1.8e-09 67.8 52 63.5
Thecc.08G064400 Theobroma cacao HOM05D009126 ORTHO05D011285 1.8e-09 67.8 45 77.8
Carub.0005s1498 Capsella rubella HOM05D009126 ORTHO05D011285 3.0e-09 67.0 47 76.6
Ciclev10003083m.g Citrus clementina HOM05D009126 ORTHO05D011285 5.1e-09 66.2 46 73.9
QL07p035122 Quercus lobata HOM05D009126 ORTHO05D011285 8.7e-09 65.5 39 84.6
Atru.chr13.74 Acer truncatum HOM05D009126 ORTHO05D011285 1.1e-08 65.1 40 80.0
Aa31sc158G30 Aethionema arabicum HOM05D009126 ORTHO05D011285 1.5e-08 64.7 49 71.4
CiPaw.08G076800 Carya illinoinensis HOM05D009126 ORTHO05D011285 1.5e-08 64.7 47 72.3
ClCG11G018970 Citrullus lanatus HOM05D009126 ORTHO05D011285 1.9e-08 64.3 48 70.8
Cfa003654 Carpinus fangiana HOM05D009126 ORTHO05D011285 2.5e-08 63.9 53 67.9
SGA_v2.0_scaffold54G19626 Striga asiatica HOM05D009126 ORTHO05D011285 4.3e-08 63.2 45 68.9
CsaV3_4G037570 Cucumis sativus L. HOM05D009126 ORTHO05D011285 1.3e-07 61.6 50 64.0
Lj3g0009895 Lotus japonicus HOM05D009126 ORTHO05D011285 1.3e-07 61.6 51 58.8
Potri.005G255701 Populus trichocarpa HOM05D009126 ORTHO05D011285 1.3e-07 61.6 44 70.5
Solyc01g088040.3 Solanum lycopersicum HOM05D009126 ORTHO05D011285 1.6e-07 61.2 48 64.6
Oeu035754.1 Olea europaea HOM05D009126 ORTHO05D011285 4.8e-07 59.7 48 60.4
Gohir.A01G102266 Gossypium hirsutum HOM05D009126 ORTHO05D011285 6.2e-07 59.3 45 62.2
Gohir.D01G087401 Gossypium hirsutum HOM05D009126 ORTHO05D011285 6.2e-07 59.3 45 62.2
Lalb_Chr12g0209641 Lupinus albus HOM05D009126 ORTHO05D011285 8.1e-07 58.9 40 75.0
Sed0014859 Sechium edule HOM05D009126 ORTHO05D011285 8.1e-07 58.9 37 75.7
Oeu035861.2 Olea europaea HOM05D009126 ORTHO05D011285 1.1e-06 58.5 43 62.8
TAR625G1075 Trochodendron aralioides HOM05D009126 ORTHO05D011285 1.8e-06 57.8 34 82.4
COL.COLO4_07461 Corchorus olitorius HOM05D009126 ORTHO05D011285 3.1e-06 57.0 37 75.7
TAR381G1079 Trochodendron aralioides HOM05D009126 ORTHO05D011285 6.9e-06 55.8 34 79.4


User provided reference genes

Program Settings