Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000194 Camellia sinensis var. sinensis HOM05D000106 ORTHO05D002214 6.7e-73 277.3 147 100.0
Nn2g10545 Nelumbo nucifera HOM05D000106 ORTHO05D002214 6.8e-25 117.9 151 49.0
Sabra13G0030100 Salix brachista HOM05D000106 ORTHO05D002214 2.6e-24 115.9 154 46.1
Actinidia37265 Actinidia chinensis HOM05D000106 ORTHO05D002214 3.7e-23 112.1 166 44.0
Lj2C1048T2 Lonicera japonica HOM05D000106 ORTHO05D002214 6.3e-23 111.3 154 46.1
Cc01_g12090 Coffea canephora HOM05D000106 ORTHO05D002214 8.3e-23 110.9 156 41.0
Atru.chr3.3788 Acer truncatum HOM05D000106 ORTHO05D002214 1.8e-22 109.8 153 45.1
MBI14_g36206_MAGBIO Magnolia biondii HOM05D000106 ORTHO05D002214 3.1e-22 109.0 120 50.0
Hma1.2p1_0746F.1_g212330 Hydrangea macrophylla HOM05D000106 ORTHO05D002214 5.4e-22 108.2 151 47.0
Oeu040271.1 Olea europaea HOM05D000106 ORTHO05D002214 5.4e-22 108.2 153 43.8
Potri.013G030100 Populus trichocarpa HOM05D000106 ORTHO05D002214 5.4e-22 108.2 154 45.5
Potri.013G030800 Populus trichocarpa HOM05D000106 ORTHO05D002214 7.0e-22 107.8 154 44.2
SGA_v2.0_scaffold194G40725 Striga asiatica HOM05D000106 ORTHO05D002214 9.1e-22 107.5 153 43.1
Ciclev10030050m.g Citrus clementina HOM05D000106 ORTHO05D002214 1.2e-21 107.1 153 46.4
TWI79G0726 Tripterygium wilfordii HOM05D000106 ORTHO05D002214 4.5e-21 105.1 153 44.4
Gorai.009G102800 Gossypium raimondii HOM05D000106 ORTHO05D002214 1.3e-20 103.6 153 43.1
Gohir.D05G098951 Gossypium hirsutum HOM05D000106 ORTHO05D002214 2.3e-20 102.8 153 43.1
Duzib168G1542 Durio zibethinus HOM05D000106 ORTHO05D002214 2.9e-20 102.4 153 42.5
Thecc.09G330700 Theobroma cacao HOM05D000106 ORTHO05D002214 3.8e-20 102.1 153 42.5
FAN16G3650 Fragaria x ananassa HOM05D002621 ORTHO05D002929 6.6e-20 101.3 154 42.9
Gohir.A05G099000 Gossypium hirsutum HOM05D000106 ORTHO05D002214 1.1e-19 100.5 153 42.5
Rhsim13G0088700 Rhododendron simsii HOM05D000106 ORTHO05D002214 1.5e-19 100.1 138 47.1
RcHm_v2.0_Chr5g0062321 Rosa chinensis HOM05D000106 ORTHO05D002214 2.5e-19 99.4 156 43.6
FvH4_3g34610 Fragaria vesca HOM05D000106 ORTHO05D002214 3.3e-19 99.0 154 41.6
Cpa.g.sc252.4 Carica papaya HOM05D000106 ORTHO05D002214 5.5e-19 98.2 148 39.2
Peaxi162Scf00411g00714 Petunia axillaris HOM05D000106 ORTHO05D002214 9.5e-19 97.4 158 41.1
MBI14_g38027_MAGBIO Magnolia biondii HOM05D000106 ORTHO05D002214 2.1e-18 96.3 126 44.4
Nitab4.5_0006523g0020 Nicotiana tabacum HOM05D000106 ORTHO05D002214 4.7e-18 95.1 149 41.6
Nitab4.5_0007030g0010 Nicotiana tabacum HOM05D000106 ORTHO05D002214 6.1e-18 94.7 149 40.9
FAN21G0358 Fragaria x ananassa HOM05D002621 ORTHO05D002929 8.0e-18 94.4 154 41.6
FAN25G3681 Fragaria x ananassa HOM05D002621 ORTHO05D002929 3.0e-17 92.4 154 40.9
Sabra13G0030200 Salix brachista HOM05D004471 ORTHO05D005345 5.2e-17 91.7 154 40.3
FvH4_3g34600 Fragaria vesca HOM05D000106 ORTHO05D002214 1.2e-16 90.5 160 40.6
PGSC0003DMG401015527 Solanum tuberosum HOM05D000106 ORTHO05D002214 1.2e-16 90.5 154 40.9
Prupe.6G087500 Prunus persica HOM05D000106 ORTHO05D002214 4.4e-16 88.6 156 41.7
Lsat_1_v5_gn_8_78781 Lactuca sativa HOM05D000106 ORTHO05D002214 7.5e-16 87.8 150 40.7
Migut.D02151 Erythranthe guttata HOM05D000106 ORTHO05D002214 9.8e-16 87.4 153 37.3
CAN.G755.16 Capsicum annuum HOM05D000106 ORTHO05D002214 1.3e-15 87.0 151 41.7
Solyc11g072930.3 Solanum lycopersicum HOM05D000106 ORTHO05D002214 2.2e-15 86.3 155 39.4
MBI14_g02604_MAGBIO Magnolia biondii HOM05D000106 ORTHO05D002214 8.3e-15 84.3 123 44.7
CDE02G2790 Ceratophyllum demersum HOM05D000106 ORTHO05D002214 3.1e-14 82.4 153 39.2
Potri.005G043700 Populus trichocarpa HOM05D000106 ORTHO05D002214 3.1e-14 82.4 155 40.0
Sabra05G0040900 Salix brachista HOM05D000106 ORTHO05D002214 1.2e-13 80.5 156 39.7
ECA236G2656 Erigeron canadensis HOM05D000106 ORTHO05D002214 1.6e-13 80.1 119 40.3
TAR369G1027 Trochodendron aralioides HOM05D000106 ORTHO05D002214 1.6e-13 80.1 103 49.5
FAN11G3854 Fragaria x ananassa HOM05D002621 ORTHO05D002929 2.0e-13 79.7 133 42.9
DCAR_015586 Daucus carota HOM05D000106 ORTHO05D002214 3.5e-13 79.0 149 38.3
Lsat_1_v5_gn_9_21460 Lactuca sativa HOM05D000106 ORTHO05D002214 4.5e-13 78.6 135 36.3
ECA236G1440 Erigeron canadensis HOM05D000106 ORTHO05D002214 2.9e-12 75.9 143 34.3
DCAR_015588 Daucus carota HOM05D000106 ORTHO05D002214 5.0e-12 75.1 151 37.7
ECA247G0310 Erigeron canadensis HOM05D000106 ORTHO05D002214 1.1e-11 73.9 127 37.8
Lsat_1_v5_gn_8_78801 Lactuca sativa HOM05D000106 ORTHO05D002214 1.1e-11 73.9 149 35.6
Lsat_1_v5_gn_9_21560 Lactuca sativa HOM05D000106 ORTHO05D002214 1.5e-11 73.6 126 37.3
GSVIVG01025060001 Vitis vinifera HOM05D000106 ORTHO05D002214 1.5e-11 73.6 101 44.6
PSO384G4762 Papaver somniferum HOM05D000106 ORTHO05D012526 2.5e-11 72.8 166 34.9
SGA_v2.0_scaffold104G30116 Striga asiatica HOM05D000106 ORTHO05D002214 2.5e-11 72.8 88 46.6
PSO339G2486 Papaver somniferum HOM05D000106 ORTHO05D012526 3.3e-11 72.4 157 39.5
Nitab4.5_0011841g0020 Nicotiana tabacum HOM05D000106 ORTHO05D002214 9.5e-11 70.9 48 68.8
CDE09G0026 Ceratophyllum demersum HOM05D000106 ORTHO05D002214 2.8e-10 69.3 61 55.7
SalBow3G3391 Salvia bowleyana HOM05D000106 ORTHO05D002214 2.8e-10 69.3 96 44.8
MD11G1117200 Malus domestica HOM05D000106 ORTHO05D002214 3.6e-10 68.9 86 45.3
Eucgr.B02416 Eucalyptus grandis HOM05D000106 ORTHO05D002214 6.1e-10 68.2 110 40.0
SalBow3G1560 Salvia bowleyana HOM05D000106 ORTHO05D002214 6.1e-10 68.2 44 70.5
FAN18G2596 Fragaria x ananassa HOM05D000106 ORTHO05D002214 8.0e-10 67.8 47 63.8
HanXRQChr14g0446361 Helianthus annuus HOM05D000106 ORTHO05D002214 8.0e-10 67.8 134 38.8
Prupe.5G239900 Prunus persica HOM05D000106 ORTHO05D002214 8.0e-10 67.8 46 67.4
Migut.O00901 Erythranthe guttata HOM05D000106 ORTHO05D002214 1.4e-09 67.0 46 63.0
PSO339G1588 Papaver somniferum HOM05D000106 ORTHO05D012526 3.1e-09 65.9 171 35.7
DCAR_015587 Daucus carota HOM05D000106 ORTHO05D002214 6.8e-09 64.7 151 34.4
Migut.N02653 Erythranthe guttata HOM05D000106 ORTHO05D002214 6.8e-09 64.7 46 65.2
HanXRQChr08g0229681 Helianthus annuus HOM05D000106 ORTHO05D002214 6.8e-09 64.7 131 35.1
Nn7g36476 Nelumbo nucifera HOM05D000106 ORTHO05D002214 8.9e-09 64.3 128 37.5
Glyma.16G219300 Glycine max HOM05D000106 ORTHO05D002214 2.6e-08 62.8 46 63.0
Psat1g028840 Pisum sativum HOM05D000106 ORTHO05D002214 2.6e-08 62.8 46 60.9
arahy.Tifrunner.gnm1.ann1.CH2YCL Arachis hypogaea HOM05D000106 ORTHO05D002214 3.4e-08 62.4 46 60.9
arahy.Tifrunner.gnm1.ann1.IGT6GQ Arachis hypogaea HOM05D000106 ORTHO05D002214 3.4e-08 62.4 46 60.9
PSO339G3810 Papaver somniferum HOM05D000106 ORTHO05D012526 3.4e-08 62.4 163 36.8
HanXRQChr08g0229661 Helianthus annuus HOM05D000106 ORTHO05D002214 4.4e-08 62.0 128 35.9
Ciclev10023778m.g Citrus clementina HOM05D000106 ORTHO05D002214 5.8e-08 61.6 44 65.9
Haze_18959 Corylus avellana HOM05D000106 ORTHO05D002214 5.8e-08 61.6 132 37.1
Lj2g0000167 Lotus japonicus HOM05D000106 ORTHO05D002214 5.8e-08 61.6 46 60.9
FvH4_7g34060 Fragaria vesca HOM05D000106 ORTHO05D002214 7.5e-08 61.2 69 47.8
PSO384G4226 Papaver somniferum HOM05D000106 ORTHO05D012526 7.5e-08 61.2 166 33.7
VMungo0464G1002 Vigna mungo HOM05D000106 ORTHO05D002214 1.3e-07 60.5 46 58.7
Migut.N02652 Erythranthe guttata HOM05D000106 ORTHO05D002214 1.7e-07 60.1 119 41.2
PSO478G2650 Papaver somniferum HOM05D000106 ORTHO05D002214 1.7e-07 60.1 46 63.0
TPR.G14854 Trifolium pratense HOM05D000106 ORTHO05D002214 1.7e-07 60.1 46 58.7
Lj1A176T59 Lonicera japonica HOM05D000106 ORTHO05D002214 2.2e-07 59.7 47 57.4
Migut.K01098 Erythranthe guttata HOM05D000106 ORTHO05D002214 2.9e-07 59.3 57 49.1
Nn7g36478 Nelumbo nucifera HOM05D000106 ORTHO05D002214 2.9e-07 59.3 136 34.6
Actinidia13169 Actinidia chinensis HOM05D000106 ORTHO05D002214 3.7e-07 58.9 41 65.9
Migut.N02654 Erythranthe guttata HOM05D000106 ORTHO05D002214 3.7e-07 58.9 50 58.0
Nn1g02082 Nelumbo nucifera HOM05D000106 ORTHO05D002214 3.7e-07 58.9 117 40.2
PSO339G3915 Papaver somniferum HOM05D000106 ORTHO05D012526 3.7e-07 58.9 162 33.3
Manes.11G136400 Manihot esculenta HOM05D000106 ORTHO05D002214 4.9e-07 58.5 77 45.5
Phvul.004G145300 Phaseolus vulgaris HOM05D000106 ORTHO05D002214 6.4e-07 58.2 96 38.5
CANSAT56G0453 Cannabis sativa HOM05D000106 ORTHO05D002214 8.3e-07 57.8 69 49.3
CDE02G1821 Ceratophyllum demersum HOM05D000106 ORTHO05D002214 1.1e-06 57.4 47 57.4
PSO063G2350 Papaver somniferum HOM05D000106 ORTHO05D002214 1.1e-06 57.4 113 37.2
FAN10G2121 Fragaria x ananassa HOM05D000106 ORTHO05D002214 1.9e-06 56.6 61 49.2
CDE09G0111 Ceratophyllum demersum HOM05D000106 ORTHO05D002214 2.4e-06 56.2 67 47.8
Nn5g30163 Nelumbo nucifera HOM05D000106 ORTHO05D002214 2.4e-06 56.2 128 34.4
PSO339G5407 Papaver somniferum HOM05D000106 ORTHO05D012526 3.2e-06 55.8 149 35.6
PSO339G5594 Papaver somniferum HOM05D000106 ORTHO05D002214 3.2e-06 55.8 46 56.5
PSO675G1256 Papaver somniferum HOM05D000106 ORTHO05D002214 3.2e-06 55.8 46 56.5
CDE02G3973 Ceratophyllum demersum HOM05D000106 ORTHO05D002214 4.1e-06 55.5 47 55.3
BolC1t04647H Brassica oleracea HOM05D000106 ORTHO05D000160 5.4e-06 55.1 66 42.4
Medtr6g071455 Medicago truncatula HOM05D000106 ORTHO05D002214 5.4e-06 55.1 97 38.1
PGR102G2799 Punica granatum HOM05D000106 ORTHO05D002214 7.0e-06 54.7 91 39.6
CANSAT56G2324 Cannabis sativa HOM05D000106 ORTHO05D002214 9.2e-06 54.3 69 47.8


User provided reference genes

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