Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 6.6e-81 303.9 145 100.0
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 1.5e-69 266.2 131 97.7
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 1.2e-58 229.9 138 81.2
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 3.0e-57 225.3 134 80.6
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 8.6e-57 223.8 138 77.5
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 7.3e-56 220.7 139 77.7
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 1.4e-54 216.5 139 74.1
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 5.2e-54 214.5 138 76.1
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 6.8e-54 214.2 139 73.4
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 1.2e-53 213.4 131 77.9
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 1.5e-53 213.0 138 75.4
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 2.0e-53 212.6 139 72.7
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 2.6e-53 212.2 137 78.1
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 7.6e-53 210.7 137 73.0
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 7.6e-53 210.7 137 74.5
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 1.3e-52 209.9 138 73.9
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.3e-52 209.9 138 73.9
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 1.7e-52 209.5 141 70.2
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 3.8e-52 208.4 138 73.2
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 8.4e-52 207.2 141 69.5
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 1.1e-51 206.8 138 71.0
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 1.1e-51 206.8 139 73.4
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 1.4e-51 206.5 138 70.3
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 1.4e-51 206.5 137 74.5
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 1.4e-51 206.5 138 71.0
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 2.4e-51 205.7 139 71.9
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 2.4e-51 205.7 131 73.3
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 3.2e-51 205.3 138 73.2
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 3.2e-51 205.3 138 73.2
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 4.1e-51 204.9 139 71.2
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 9.2e-51 203.8 138 68.8
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 1.2e-50 203.4 137 70.1
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 1.2e-50 203.4 139 69.1
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 2.7e-50 202.2 138 73.2
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 6.0e-50 201.1 138 71.0
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 7.8e-50 200.7 140 68.6
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 7.8e-50 200.7 119 80.7
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 1.0e-49 200.3 135 73.3
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 1.3e-49 199.9 140 67.9
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 1.7e-49 199.5 137 70.8
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 2.3e-49 199.1 139 70.5
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 3.0e-49 198.7 145 66.9
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 8.7e-49 197.2 140 67.1
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 1.1e-48 196.8 138 66.7
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 1.1e-48 196.8 138 70.3
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 1.5e-48 196.4 139 68.3
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 1.5e-48 196.4 139 68.3
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 2.5e-48 195.7 138 68.8
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 3.3e-48 195.3 138 68.8
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 3.3e-48 195.3 136 69.9
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 4.3e-48 194.9 140 66.4
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 1.2e-47 193.4 139 67.6
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 3.6e-47 191.8 132 68.2
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 8.1e-47 190.7 131 71.0
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 1.8e-46 189.5 132 69.7
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 3.1e-46 188.7 100 87.0
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 4.0e-46 188.3 138 66.7
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 4.0e-46 188.3 140 67.9
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 5.2e-46 188.0 137 64.2
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 5.2e-46 188.0 100 87.0
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 1.2e-45 186.8 139 65.5
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 2.6e-45 185.7 137 65.7
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 3.4e-45 185.3 137 65.0
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 4.4e-45 184.9 113 77.0
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 4.4e-45 184.9 140 65.0
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 5.8e-45 184.5 113 77.0
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 1.7e-44 183.0 113 76.1
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 2.2e-44 182.6 132 65.2
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 3.8e-44 181.8 100 85.0
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 3.8e-44 181.8 113 76.1
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 6.4e-44 181.0 138 65.9
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 8.4e-44 180.6 147 61.9
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 1.1e-43 180.3 139 63.3
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 1.4e-43 179.9 130 64.6
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 1.4e-43 179.9 138 62.3
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 2.4e-43 179.1 140 62.1
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 7.1e-43 177.6 99 82.8
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 1.2e-42 176.8 112 75.9
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 2.7e-42 175.6 100 81.0
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 6.0e-42 174.5 100 81.0
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 1.0e-41 173.7 139 61.2
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 1.3e-41 173.3 100 82.0
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 1.7e-41 172.9 130 64.6
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 3.0e-41 172.2 138 62.3
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 8.7e-41 170.6 112 69.6
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 4.3e-40 168.3 105 73.3
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 4.3e-40 168.3 105 73.3
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 5.6e-40 167.9 105 73.3
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 5.6e-40 167.9 105 73.3
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 5.6e-40 167.9 105 73.3
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 9.6e-40 167.2 100 75.0
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 9.6e-40 167.2 132 60.6
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 2.1e-39 166.0 110 70.0
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 3.6e-39 165.2 132 62.9
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 3.6e-39 165.2 98 78.6
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 8.1e-39 164.1 106 70.8
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 1.1e-38 163.7 105 72.4
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 1.4e-38 163.3 100 75.0
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 1.8e-38 162.9 112 66.1
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 1.8e-38 162.9 100 75.0
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 3.1e-38 162.2 112 64.3
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 3.1e-38 162.2 112 64.3
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 3.1e-38 162.2 112 64.3
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 1.2e-37 160.2 112 64.3
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 1.5e-37 159.8 108 68.5
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 1.3e-36 156.8 117 61.5
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 3.8e-36 155.2 95 75.8
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 3.8e-36 155.2 140 57.9
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 5.4e-35 151.4 132 56.1
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 1.6e-34 149.8 137 54.0
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.8e-33 146.4 101 65.3
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.1e-32 143.7 101 63.4
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 1.5e-32 143.3 135 51.1
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 5.6e-32 141.4 135 53.3
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 9.6e-32 140.6 131 51.9
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 8.1e-31 137.5 95 65.3
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 4.5e-29 131.7 120 49.2
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 6.4e-28 127.9 105 60.0
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 6.0e-26 121.3 139 48.9
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 1.8e-22 109.8 72 68.1
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 7.6e-21 104.4 96 49.0
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 6.7e-17 91.3 71 60.6
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 1.5e-16 90.1 58 72.4
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 7.4e-16 87.8 71 59.2
Lj1P1152T38 Lonicera japonica HOM05D006345 ORTHO05D007428 7.7e-13 77.8 46 71.7
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 2.5e-11 72.8 48 66.7
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 3.3e-08 62.4 40 70.0
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 1.3e-07 60.5 33 81.8
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 1.7e-07 60.1 64 40.6


User provided reference genes

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