Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000160 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 2.3e-108 395.6 197 100.0
CSS0008834 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 5.6e-99 364.4 197 93.9
CSS0006994 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 6.6e-92 340.9 196 88.8
CSS0032384 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 6.6e-92 340.9 196 88.8
CSS0043047 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 2.6e-64 249.2 193 70.5
CSS0045073 Camellia sinensis var. sinensis HOM05D006354 ORTHO05D007773 2.6e-64 249.2 193 70.5
Actinidia23941 Actinidia chinensis HOM05D006354 ORTHO05D007773 5.6e-59 231.5 193 64.2
Dinv17001 Davidia involucrata HOM05D006354 ORTHO05D007773 1.3e-58 230.3 193 64.2
Dinv42950 Davidia involucrata HOM05D006354 ORTHO05D007773 1.3e-58 230.3 193 64.2
Dinv43150 Davidia involucrata HOM05D006354 ORTHO05D007773 1.3e-58 230.3 193 64.2
vmacro14519 Vaccinium macrocarpon HOM05D006354 ORTHO05D007773 8.1e-58 227.6 191 63.4
Hma1.2p1_0418F.1_g149110 Hydrangea macrophylla HOM05D006354 ORTHO05D007773 1.2e-53 213.8 235 51.9
Cc01_g12860 Coffea canephora HOM05D006354 ORTHO05D007773 2.7e-53 212.6 190 58.9
PGSC0003DMG402026981 Solanum tuberosum HOM05D006354 ORTHO05D007773 6.0e-53 211.5 238 49.2
Peaxi162Scf00046g10227 Petunia axillaris HOM05D006354 ORTHO05D007773 7.9e-53 211.1 191 58.1
QL01p032009 Quercus lobata HOM05D006354 ORTHO05D007773 7.9e-53 211.1 237 50.6
CiPaw.13G094400 Carya illinoinensis HOM05D006354 ORTHO05D007773 2.3e-52 209.5 240 50.8
Sopen06g028180 Solanum pennellii HOM05D006354 ORTHO05D007773 2.3e-52 209.5 238 49.2
Solyc06g071900.3 Solanum lycopersicum HOM05D006354 ORTHO05D007773 3.0e-52 209.1 238 48.7
Hund18908 Selenicereus undatus HOM05D006354 ORTHO05D007773 3.9e-52 208.8 193 57.5
Lj2A1062T49 Lonicera japonica HOM05D006354 ORTHO05D007773 6.7e-52 208.0 193 58.5
CAN.G1046.5 Capsicum annuum HOM05D006354 ORTHO05D007773 2.5e-51 206.1 193 56.5
DCAR_018909 Daucus carota HOM05D006354 ORTHO05D007773 3.3e-51 205.7 238 49.2
Duzib168G1732 Durio zibethinus HOM05D006354 ORTHO05D007773 4.3e-51 205.3 191 57.1
RcHm_v2.0_Chr5g0064501 Rosa chinensis HOM05D006354 ORTHO05D007773 4.3e-51 205.3 193 58.5
MSTRG.18578 Avicennia marina HOM05D006354 ORTHO05D007773 5.6e-51 204.9 190 56.8
TWI79G1739 Tripterygium wilfordii HOM05D006354 ORTHO05D007773 5.6e-51 204.9 191 55.5
CsaV3_6G016810 Cucumis sativus L. HOM05D006354 ORTHO05D007773 9.6e-51 204.1 194 57.2
DCAR_005337 Daucus carota HOM05D006354 ORTHO05D007773 9.6e-51 204.1 193 58.0
EL10Ac7g16019 Beta vulgaris HOM05D006354 ORTHO05D007773 1.3e-50 203.8 193 56.0
ClCG02G020110 Citrullus lanatus HOM05D006354 ORTHO05D007773 1.3e-50 203.8 194 56.2
Nitab4.5_0004018g0070 Nicotiana tabacum HOM05D006354 ORTHO05D007773 1.3e-50 203.8 187 56.1
FAN21G2277 Fragaria x ananassa HOM05D006354 ORTHO05D007773 2.1e-50 203.0 193 58.5
Cpa.g.sc81.152 Carica papaya HOM05D006354 ORTHO05D007773 2.8e-50 202.6 193 56.5
FAN11G1115 Fragaria x ananassa HOM05D006354 ORTHO05D007773 2.8e-50 202.6 193 58.0
arahy.Tifrunner.gnm1.ann1.J6ZHUK Arachis hypogaea HOM05D006354 ORTHO05D007773 3.7e-50 202.2 193 56.0
MELO3C025913.2 Cucumis melo HOM05D006354 ORTHO05D007773 3.7e-50 202.2 194 56.7
Cfa009012 Carpinus fangiana HOM05D002216 ORTHO05D007773 4.8e-50 201.8 193 57.5
SalBow3G3492 Salvia bowleyana HOM05D006354 ORTHO05D007773 4.8e-50 201.8 191 55.0
Sc06g0008310 Simmondsia chinensis HOM05D006354 ORTHO05D007773 4.8e-50 201.8 191 54.5
FvH4_3g36060 Fragaria vesca HOM05D006354 ORTHO05D007773 6.2e-50 201.4 193 58.0
FAN16G3445 Fragaria x ananassa HOM05D006354 ORTHO05D007773 6.2e-50 201.4 193 58.0
unitig_746.g26734 Utricularia gibba HOM05D006354 ORTHO05D007773 8.1e-50 201.1 192 54.7
AUR62001785 Chenopodium quinoa HOM05D006354 ORTHO05D007773 1.1e-49 200.7 193 53.4
Haze_12045 Corylus avellana HOM05D002216 ORTHO05D007773 1.1e-49 200.7 193 57.0
HanXRQChr08g0235771 Helianthus annuus HOM05D006354 ORTHO05D007773 1.1e-49 200.7 191 53.9
Prupe.6G077700 Prunus persica HOM05D006354 ORTHO05D007773 1.1e-49 200.7 238 49.2
Glyma.15G038300 Glycine max HOM05D006354 ORTHO05D007773 1.4e-49 200.3 193 56.5
Manes.01G174100 Manihot esculenta HOM05D006354 ORTHO05D007773 1.4e-49 200.3 193 56.0
Phvul.L005443 Phaseolus vulgaris HOM05D006354 ORTHO05D007773 1.8e-49 199.9 193 56.5
VMungo1080G0880 Vigna mungo HOM05D006354 ORTHO05D007773 1.8e-49 199.9 193 56.5
TAR633G1968 Trochodendron aralioides HOM05D006354 ORTHO05D007773 5.3e-49 198.4 191 55.5
Migut.D02102 Erythranthe guttata HOM05D006354 ORTHO05D007773 1.2e-48 197.2 191 56.0
Glyma.13G336000 Glycine max HOM05D006354 ORTHO05D007773 1.2e-48 197.2 193 56.0
Thecc.10G082700 Theobroma cacao HOM05D006354 ORTHO05D007773 1.2e-48 197.2 191 55.5
Lj3g0014698 Lotus japonicus HOM05D006354 ORTHO05D007773 2.0e-48 196.4 193 54.4
ECA238G1940 Erigeron canadensis HOM05D006354 ORTHO05D007773 2.6e-48 196.1 193 52.8
PGR083G0842 Punica granatum HOM05D006354 ORTHO05D007773 2.6e-48 196.1 191 55.0
Manes.07G091301 Manihot esculenta HOM05D006354 ORTHO05D007773 3.4e-48 195.7 191 55.0
Manes.07G090800 Manihot esculenta HOM05D006354 ORTHO05D007773 4.5e-48 195.3 193 54.9
Potri.009G030900 Populus trichocarpa HOM05D006354 ORTHO05D007773 4.5e-48 195.3 191 53.9
Sabra09G0021800 Salix brachista HOM05D006354 ORTHO05D007773 4.5e-48 195.3 191 54.5
MD11G1109000 Malus domestica HOM05D006354 ORTHO05D007773 7.6e-48 194.5 193 54.9
Rhsim01G0227400 Rhododendron simsii HOM05D006354 ORTHO05D007773 1.0e-47 194.1 193 58.0
Gohir.A07G098400 Gossypium hirsutum HOM05D006354 ORTHO05D007773 1.3e-47 193.7 191 53.4
Gohir.D07G102700 Gossypium hirsutum HOM05D006354 ORTHO05D007773 1.3e-47 193.7 191 53.9
Gorai.001G110600 Gossypium raimondii HOM05D006354 ORTHO05D007773 1.3e-47 193.7 191 53.9
Sed0003888 Sechium edule HOM05D006354 ORTHO05D007773 1.3e-47 193.7 194 54.1
Lalb_Chr17g0347271 Lupinus albus HOM05D006354 ORTHO05D007773 1.7e-47 193.4 191 54.5
Nn5g26915 Nelumbo nucifera HOM05D006354 ORTHO05D007773 1.7e-47 193.4 191 53.9
CANSAT54G2536 Cannabis sativa HOM05D006354 ORTHO05D007773 2.2e-47 193.0 236 46.6
BcaC07g42486 Brassica carinata HOM05D006354 ORTHO05D007773 4.9e-47 191.8 238 43.3
Ciclev10028134m.g Citrus clementina HOM05D006354 ORTHO05D007773 4.9e-47 191.8 191 54.5
COL.COLO4_17142 Corchorus olitorius HOM05D006354 ORTHO05D007773 6.5e-47 191.4 187 55.6
Eucgr.H04667 Eucalyptus grandis HOM05D006354 ORTHO05D007773 8.4e-47 191.0 189 55.0
THA.LOC104800659 Tarenaya hassleriana HOM05D006354 ORTHO05D007773 8.4e-47 191.0 193 51.8
Atru.BG.120.p Acer truncatum HOM05D006354 ORTHO05D007773 1.1e-46 190.7 232 49.6
Medtr2g096880 Medicago truncatula HOM05D006354 ORTHO05D007773 1.9e-46 189.9 193 52.3
CARHR007380 Cardamine hirsuta HOM05D006354 ORTHO05D007773 2.5e-46 189.5 236 43.6
Thhalv10007326m.g Eutrema salsugineum HOM05D006354 ORTHO05D007773 2.5e-46 189.5 191 49.7
Ah.06g184240 Amaranthus hybridus HOM05D006354 ORTHO05D007773 3.2e-46 189.1 191 51.8
MBI16_g39932_MAGBIO Magnolia biondii HOM05D006354 ORTHO05D007773 4.2e-46 188.7 193 52.3
Psat5g284560 Pisum sativum HOM05D006354 ORTHO05D007773 5.5e-46 188.3 193 51.8
TPR.G34321 Trifolium pratense HOM05D006354 ORTHO05D007773 7.1e-46 188.0 193 52.3
Oeu019195.1 Olea europaea HOM05D006354 ORTHO05D007773 9.3e-46 187.6 178 56.7
AL1G17770 Arabidopsis lyrata HOM05D006354 ORTHO05D007773 1.6e-45 186.8 191 49.2
PSO151G0044 Papaver somniferum HOM05D006354 ORTHO05D007773 1.6e-45 186.8 193 52.3
BcaC07g41984 Brassica carinata HOM05D006354 ORTHO05D007773 2.1e-45 186.4 236 42.4
C08p50450 Brassica napus HOM05D006354 ORTHO05D007773 2.1e-45 186.4 236 42.4
BolC8t52573H Brassica oleracea HOM05D006354 ORTHO05D007773 2.1e-45 186.4 236 42.4
Aa31sc13G80 Aethionema arabicum HOM05D006354 ORTHO05D007773 2.7e-45 186.0 191 49.2
Sed0005059 Sechium edule HOM05D006354 ORTHO05D007773 2.7e-45 186.0 194 53.1
GSVIVG01024964001 Vitis vinifera HOM05D006354 ORTHO05D007773 3.5e-45 185.7 183 57.4
AT1G07590 Arabidopsis thaliana HOM05D006354 ORTHO05D007773 6.0e-45 184.9 191 49.7
BraA09t41965Z Brassica rapa HOM05D006354 ORTHO05D007773 1.0e-44 184.1 236 41.9
Carub.0001s0691 Capsella rubella HOM05D006354 ORTHO05D007773 1.0e-44 184.1 191 49.2
A09p66280 Brassica napus HOM05D006354 ORTHO05D007773 2.3e-44 183.0 191 47.6
PSO339G2149 Papaver somniferum HOM05D006354 ORTHO05D007773 3.0e-44 182.6 193 51.3
Sp1g06320 Schrenkiella parvula HOM05D006354 ORTHO05D007773 6.7e-44 181.4 191 48.2
Aqoxy2G02124 Aquilegia oxysepala HOM05D006354 ORTHO05D007773 3.3e-43 179.1 193 49.2
Aqoxy455s003 Aquilegia oxysepala HOM05D006354 ORTHO05D007773 3.3e-43 179.1 193 49.2
Lsat_1_v5_gn_9_23500 Lactuca sativa HOM05D006354 ORTHO05D007773 8.2e-42 174.5 191 47.6
ATR0827G002 Amborella trichopoda HOM05D006354 ORTHO05D007773 3.1e-41 172.6 193 47.2
HPP92_025528 Vanilla planifolia HOM05D006354 ORTHO05D007773 2.2e-39 166.4 191 46.6
HPP92_025507 Vanilla planifolia HOM05D006354 ORTHO05D007773 5.0e-39 165.2 193 46.6
SHI07598 Sapria himalayana HOM05D006354 ORTHO05D007773 1.0e-36 157.5 192 46.4
CDE06G0212 Ceratophyllum demersum HOM05D006354 ORTHO05D007773 1.2e-32 144.1 188 43.1
AUR62009573 Chenopodium quinoa HOM05D006354 ORTHO05D007773 7.7e-32 141.4 159 48.4
Ca_01327_v3 Cicer arietinum L. HOM05D006354 ORTHO05D007773 3.3e-27 125.9 193 39.4
Nitab4.5_0002726g0010 Nicotiana tabacum HOM05D004808 ORTHO05D007773 1.3e-26 124.0 143 46.9
MBI16_g22330_MAGBIO Magnolia biondii HOM05D006354 ORTHO05D007773 1.8e-25 120.2 156 46.2
CDE06G1477 Ceratophyllum demersum HOM05D006354 ORTHO05D007773 5.0e-15 85.5 198 32.3
Pp3c21_11730 Physcomitrium patens HOM05D000300 ORTHO05D002838 3.3e-11 72.8 186 26.3
Pp3c18_8600 Physcomitrium patens HOM05D000300 ORTHO05D002838 5.9e-08 62.0 81 37.0
AagrBONN_evm.TU.Sc2ySwM_228.314 Anthoceros agrestis HOM05D002649 ORTHO05D002838 3.8e-07 59.3 185 24.9
Phvul.007G280400 Phaseolus vulgaris HOM05D002649 ORTHO05D002838 8.5e-07 58.2 184 25.0
Psat5g284640 Pisum sativum HOM05D006354 ORTHO05D007773 8.5e-07 58.2 43 62.8
Migut.J01647 Erythranthe guttata HOM05D002649 ORTHO05D002838 2.5e-06 56.6 184 25.0
Lalb_Chr14g0365771 Lupinus albus HOM05D002649 ORTHO05D002838 3.2e-06 56.2 184 27.2
SalBow1G2416 Salvia bowleyana HOM05D002649 ORTHO05D002838 5.5e-06 55.5 96 33.3
Zm00001eb332580 Zea mays HOM05D002649 ORTHO05D002838 5.5e-06 55.5 183 24.0
AUR62018354 Chenopodium quinoa HOM05D002649 ORTHO05D002838 7.2e-06 55.1 194 24.2
SEGI_09142 Sequoiadendron giganteum HOM05D002649 ORTHO05D002838 7.2e-06 55.1 95 29.5
SEGI_40375 Sequoiadendron giganteum HOM05D000300 ORTHO05D000383 7.2e-06 55.1 150 25.3


User provided reference genes

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