Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000154 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.5e-195 685.3 341 100.0
CSS0031773 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 2.5e-78 296.6 359 54.0
CSS0031756 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 6.9e-73 278.5 361 51.2
CSS0013976 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 4.2e-70 269.2 372 50.8
CSS0036030 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 9.4e-62 241.5 372 47.8
CSS0039876 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 6.2e-29 132.5 145 54.5
CSS0050237 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 6.2e-29 132.5 137 55.5
CSS0047522 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.4e-28 131.3 147 53.1
CSS0037636 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 1.6e-24 117.9 285 34.7
CSS0024493 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 8.6e-23 112.1 149 47.7
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-15 88.6 158 41.8
CSS0006070 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-15 85.9 225 38.2
Manes.08G119311 Manihot esculenta HOM05D011157 ORTHO05D000001 4.1e-09 66.6 116 40.5
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 4.1e-09 66.6 161 36.0
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 4.1e-09 66.6 161 36.0
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.2e-08 65.1 179 35.8
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 3.5e-08 63.5 116 39.7
Manes.10G073332 Manihot esculenta HOM05D000002 ORTHO05D000047 6.0e-08 62.8 110 39.1
CSS0027343 Camellia sinensis var. sinensis HOM05D030793 ORTHO05D000047 1.5e-06 58.2 168 29.2
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.3e-06 57.0 111 36.0
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.6e-06 56.2 111 35.1
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.6e-06 56.2 111 35.1
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.6e-06 56.2 111 35.1
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.6e-06 56.2 111 35.1
CSS0043797 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.6e-06 56.2 111 35.1
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.6e-06 56.2 111 35.1
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.6e-06 55.5 111 35.1
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.6e-06 55.5 111 35.1


User provided reference genes

Program Settings