Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000148 Camellia sinensis var. sinensis HOM05D017641 ORTHO05D017714 1.6e-143 512.7 255 100.0
CSS0049731 Camellia sinensis var. sinensis HOM05D017641 ORTHO05D017714 5.8e-125 451.1 255 91.4
CSS0048342 Camellia sinensis var. sinensis HOM05D017641 ORTHO05D017714 6.8e-89 331.3 195 82.6
CSS0011647 Camellia sinensis var. sinensis HOM05D017641 ORTHO05D017714 8.8e-89 330.9 192 87.0
CSS0001489 Camellia sinensis var. sinensis HOM05D017641 ORTHO05D017714 1.0e-81 307.4 192 82.3
CSS0012585 Camellia sinensis var. sinensis HOM05D017641 ORTHO05D017714 2.0e-77 293.1 192 79.7
CSS0049407 Camellia sinensis var. sinensis HOM05D017641 ORTHO05D017714 9.2e-62 241.1 195 70.3
CSS0046683 Camellia sinensis var. sinensis HOM05D002780 ORTHO05D003254 2.5e-19 100.1 53 92.5
CSS0006289 Camellia sinensis var. sinensis HOM05D002780 ORTHO05D003254 7.4e-19 98.6 53 90.6
CSS0028953 Camellia sinensis var. sinensis HOM05D002780 ORTHO05D003254 6.9e-17 92.0 53 83.0
Actinidia19555 Actinidia chinensis HOM05D002780 ORTHO05D003254 2.5e-14 83.6 50 80.0
Actinidia37721 Actinidia chinensis HOM05D002780 ORTHO05D003254 1.6e-13 80.9 50 78.0
Dinv33284 Davidia involucrata HOM05D002780 ORTHO05D003254 6.0e-13 79.0 53 73.6
TWI60G0345 Tripterygium wilfordii HOM05D002780 ORTHO05D003254 3.0e-12 76.6 51 68.6
Rhsim08G0039600 Rhododendron simsii HOM05D002780 ORTHO05D003254 3.9e-12 76.3 43 83.7
TWI34G1436 Tripterygium wilfordii HOM05D002780 ORTHO05D003254 6.7e-12 75.5 51 66.7
GSVIVG01032996001 Vitis vinifera HOM05D002780 ORTHO05D003254 9.6e-11 71.6 51 70.6
Potri.014G145700 Populus trichocarpa HOM05D002780 ORTHO05D003254 1.3e-10 71.2 47 70.2
Thecc.04G046800 Theobroma cacao HOM05D002780 ORTHO05D003254 3.7e-10 69.7 46 73.9
Hma1.2p1_0421F.1_g149980 Hydrangea macrophylla HOM05D002780 ORTHO05D003254 4.8e-10 69.3 51 68.6
MD09G1003700 Malus domestica HOM05D002780 ORTHO05D003254 4.8e-10 69.3 47 70.2
Atru.chr6.2651 Acer truncatum HOM05D002780 ORTHO05D003254 1.1e-09 68.2 46 69.6
Atru.chr6.2683 Acer truncatum HOM05D002780 ORTHO05D003254 1.1e-09 68.2 46 69.6
Sed0007789 Sechium edule HOM05D002780 ORTHO05D003254 1.1e-09 68.2 45 75.6
Glyma.19G102100 Glycine max HOM05D002780 ORTHO05D003254 1.4e-09 67.8 48 62.5
MD17G1007300 Malus domestica HOM05D002780 ORTHO05D003254 2.4e-09 67.0 47 68.1
Potri.004G180600 Populus trichocarpa HOM05D002780 ORTHO05D017714 2.4e-09 67.0 47 68.1
ClCG01G007810 Citrullus lanatus HOM05D002780 ORTHO05D003254 4.1e-09 66.2 46 71.7
Duzib147G0062 Durio zibethinus HOM05D002780 ORTHO05D003254 4.1e-09 66.2 46 67.4
Lj7A616T60 Lonicera japonica HOM05D002780 ORTHO05D003254 4.1e-09 66.2 51 64.7
Lalb_Chr22g0359951 Lupinus albus HOM05D002780 ORTHO05D003254 4.1e-09 66.2 48 66.7
Glyma.16G049300 Glycine max HOM05D002780 ORTHO05D003254 5.3e-09 65.9 48 64.6
Psat3g093880 Pisum sativum HOM05D002780 ORTHO05D003254 5.3e-09 65.9 48 62.5
Potri.002G236800 Populus trichocarpa HOM05D002780 ORTHO05D003254 6.9e-09 65.5 46 67.4
Sabra02G0180400 Salix brachista HOM05D002780 ORTHO05D003254 6.9e-09 65.5 46 67.4
Ca_08133_v3 Cicer arietinum L. HOM05D002780 ORTHO05D003254 9.0e-09 65.1 48 58.3
Glyma.02G066100 Glycine max HOM05D002780 ORTHO05D003254 9.0e-09 65.1 48 64.6
Nitab4.5_0000640g0090 Nicotiana tabacum HOM05D002780 ORTHO05D003254 1.2e-08 64.7 48 68.8
Lj1g0018728 Lotus japonicus HOM05D002780 ORTHO05D003254 1.5e-08 64.3 48 64.6
Prupe.3G312900 Prunus persica HOM05D002780 ORTHO05D003254 1.5e-08 64.3 45 71.1
Cpa.g.sc70.76 Carica papaya HOM05D002780 ORTHO05D003254 2.0e-08 63.9 46 67.4
Ciclev10014778m.g Citrus clementina HOM05D002780 ORTHO05D003254 2.6e-08 63.5 44 65.9
Cc07_g01220 Coffea canephora HOM05D002780 ORTHO05D003254 2.6e-08 63.5 53 67.9
Lalb_Chr06g0173821 Lupinus albus HOM05D002780 ORTHO05D003254 2.6e-08 63.5 49 61.2
Duzib264G0273 Durio zibethinus HOM05D002780 ORTHO05D003254 3.4e-08 63.2 42 73.8
Glyma.16G147300 Glycine max HOM05D002780 ORTHO05D003254 3.4e-08 63.2 51 60.8
Eucgr.I01605 Eucalyptus grandis HOM05D002780 ORTHO05D003254 4.5e-08 62.8 46 67.4
Lalb_Chr02g0156831 Lupinus albus HOM05D002780 ORTHO05D003254 4.5e-08 62.8 48 60.4
Ca_13677_v3 Cicer arietinum L. HOM05D002780 ORTHO05D003254 7.6e-08 62.0 48 62.5
Peaxi162Scf00937g00028 Petunia axillaris HOM05D002780 ORTHO05D003254 7.6e-08 62.0 46 71.7
arahy.Tifrunner.gnm1.ann1.X5ZWNG Arachis hypogaea HOM05D002780 ORTHO05D003254 1.0e-07 61.6 44 65.9
arahy.Tifrunner.gnm1.ann1.X87CF4 Arachis hypogaea HOM05D002780 ORTHO05D003254 1.0e-07 61.6 44 65.9
TAR629G2066 Trochodendron aralioides HOM05D002780 ORTHO05D003254 1.0e-07 61.6 47 68.1
MELO3C005112.2 Cucumis melo HOM05D002780 ORTHO05D003254 1.3e-07 61.2 47 70.2
CsaV3_5G024880 Cucumis sativus L. HOM05D002780 ORTHO05D003254 1.7e-07 60.8 46 69.6
Peaxi162Scf00275g00216 Petunia axillaris HOM05D002780 ORTHO05D003254 1.7e-07 60.8 48 64.6
Prupe.1G216900 Prunus persica HOM05D002780 ORTHO05D003254 1.7e-07 60.8 49 65.3
TPR.G36674 Trifolium pratense HOM05D002780 ORTHO05D003254 1.7e-07 60.8 46 63.0
MD16G1129600 Malus domestica HOM05D002780 ORTHO05D003254 2.2e-07 60.5 49 65.3
Oeu035382.1 Olea europaea HOM05D002780 ORTHO05D003254 2.2e-07 60.5 43 72.1
CSS0037878 Camellia sinensis var. sinensis HOM05D002780 ORTHO05D003254 2.9e-07 60.1 50 60.0
CSS0045995 Camellia sinensis var. sinensis HOM05D002780 ORTHO05D003254 2.9e-07 60.1 50 60.0
DCAR_014474 Daucus carota HOM05D002780 ORTHO05D003254 2.9e-07 60.1 44 70.5
Gohir.A07G232400 Gossypium hirsutum HOM05D002780 ORTHO05D003254 2.9e-07 60.1 36 75.0
Gohir.D07G239600 Gossypium hirsutum HOM05D002780 ORTHO05D003254 2.9e-07 60.1 36 75.0
Gorai.001G275700 Gossypium raimondii HOM05D002780 ORTHO05D003254 2.9e-07 60.1 36 75.0
CAN.G282.119 Capsicum annuum HOM05D002780 ORTHO05D003254 3.8e-07 59.7 46 65.2
COL.COLO4_13364 Corchorus olitorius HOM05D002780 ORTHO05D003254 3.8e-07 59.7 46 67.4
FvH4_6g54240 Fragaria vesca HOM05D002780 ORTHO05D003254 3.8e-07 59.7 45 64.4
Lj2g0001081 Lotus japonicus HOM05D002780 ORTHO05D003254 3.8e-07 59.7 48 62.5
PGR142G0536 Punica granatum HOM05D002780 ORTHO05D003254 3.8e-07 59.7 48 64.6
Sed0020339 Sechium edule HOM05D002780 ORTHO05D003254 3.8e-07 59.7 45 66.7
Solyc01g005240.4 Solanum lycopersicum HOM05D002780 ORTHO05D003254 3.8e-07 59.7 43 69.8
Sopen01g001270 Solanum pennellii HOM05D002780 ORTHO05D003254 3.8e-07 59.7 43 69.8
PGSC0003DMG400022782 Solanum tuberosum HOM05D002780 ORTHO05D003254 3.8e-07 59.7 43 69.8
FAN02G3626 Fragaria x ananassa HOM05D002780 ORTHO05D003254 5.0e-07 59.3 45 64.4
vmacro01026 Vaccinium macrocarpon HOM05D002780 ORTHO05D003254 5.0e-07 59.3 50 58.0
FAN14G4219 Fragaria x ananassa HOM05D002780 ORTHO05D003254 8.4e-07 58.5 44 65.9
CDE02G3698 Ceratophyllum demersum HOM05D002780 ORTHO05D003254 1.1e-06 58.2 46 69.6
CDE09G0707 Ceratophyllum demersum HOM05D002780 ORTHO05D003254 1.1e-06 58.2 46 69.6
HanXRQChr17g0550991 Helianthus annuus HOM05D002780 ORTHO05D003254 1.9e-06 57.4 35 74.3
RcHm_v2.0_Chr2g0176441 Rosa chinensis HOM05D002780 ORTHO05D003254 1.9e-06 57.4 46 60.9
Aa31LG5G11140 Aethionema arabicum HOM05D002780 ORTHO05D003254 2.5e-06 57.0 40 65.0
Dinv15387 Davidia involucrata HOM05D002780 ORTHO05D003254 2.5e-06 57.0 49 59.2
FAN05G4237 Fragaria x ananassa HOM05D002780 ORTHO05D003254 2.5e-06 57.0 45 60.0
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 3.2e-06 56.6 50 62.0
Gohir.D09G000600 Gossypium hirsutum HOM05D002780 ORTHO05D003254 3.2e-06 56.6 42 61.9
Gorai.006G000400 Gossypium raimondii HOM05D002780 ORTHO05D003254 3.2e-06 56.6 42 61.9
Lsat_1_v5_gn_0_22641 Lactuca sativa HOM05D002780 ORTHO05D003254 3.2e-06 56.6 35 71.4
Nitab4.5_0000198g0070 Nicotiana tabacum HOM05D002780 ORTHO05D003254 3.2e-06 56.6 39 71.8
Os03g0850400 Oryza sativa ssp. japonica HOM05D002780 ORTHO05D003254 3.2e-06 56.6 45 62.2
Rhsim12G0018000 Rhododendron simsii HOM05D002780 ORTHO05D003254 3.2e-06 56.6 50 56.0
Phvul.004G070100 Phaseolus vulgaris HOM05D002780 ORTHO05D003254 4.2e-06 56.2 35 71.4
FAN07G1996 Fragaria x ananassa HOM05D002780 ORTHO05D003254 5.5e-06 55.8 49 63.3
Medtr6g033260 Medicago truncatula HOM05D002780 ORTHO05D003254 5.5e-06 55.8 45 60.0
HPP92_001934 Vanilla planifolia HOM05D002780 ORTHO05D003254 5.5e-06 55.8 44 61.4
FvH4_4g22800 Fragaria vesca HOM05D002780 ORTHO05D003254 7.2e-06 55.5 48 62.5
Oeu003420.2 Olea europaea HOM05D002780 ORTHO05D003254 7.2e-06 55.5 47 63.8
ECA238G2884 Erigeron canadensis HOM05D002780 ORTHO05D003254 9.3e-06 55.1 42 61.9
Thecc.02G194200 Theobroma cacao HOM05D002780 ORTHO05D003254 9.3e-06 55.1 50 56.0


User provided reference genes

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