Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000138 Camellia sinensis var. sinensis HOM05D065712 ORTHO05D112211 1.4e-57 226.1 116 100.0
CSS0037884 Camellia sinensis var. sinensis HOM05D065712 ORTHO05D110178 4.5e-40 167.9 116 76.7
Hma1.2p1_2149F.1_g315170 Hydrangea macrophylla HOM05D001490 ORTHO05D001450 8.3e-18 94.0 126 50.8
Actinidia18938 Actinidia chinensis HOM05D001490 ORTHO05D001450 1.1e-14 83.6 103 54.4
Rhsim12G0144000 Rhododendron simsii HOM05D003846 ORTHO05D004726 1.6e-13 79.7 114 52.6
Dinv09634 Davidia involucrata HOM05D001490 ORTHO05D001450 9.1e-09 63.9 106 43.4
Dinv07360 Davidia involucrata HOM05D001490 ORTHO05D001450 1.2e-08 63.5 107 43.0
GSVIVG01008257001 Vitis vinifera HOM05D001490 ORTHO05D001450 7.7e-08 60.8 85 49.4
AUR62024317 Chenopodium quinoa HOM05D001490 ORTHO05D001450 1.0e-07 60.5 92 46.7
Prupe.5G218900 Prunus persica HOM05D001490 ORTHO05D001450 1.3e-07 60.1 91 51.6
AUR62012051 Chenopodium quinoa HOM05D001490 ORTHO05D001450 3.8e-07 58.5 96 43.8
TAR374G1258 Trochodendron aralioides HOM05D001490 ORTHO05D001450 3.8e-07 58.5 82 43.9
RcHm_v2.0_Chr7g0184851 Rosa chinensis HOM05D001490 ORTHO05D001450 6.6e-07 57.8 88 45.5
Duzib084G0311 Durio zibethinus HOM05D001490 ORTHO05D001450 8.6e-07 57.4 113 45.1
Nn4g23770 Nelumbo nucifera HOM05D001490 ORTHO05D001450 1.5e-06 56.6 84 46.4
EL10Ac2g04554 Beta vulgaris HOM05D001490 ORTHO05D001450 1.9e-06 56.2 77 42.9
Duzib084G0037 Durio zibethinus HOM05D001490 ORTHO05D001450 1.9e-06 56.2 113 44.2
TPR.G21709 Trifolium pratense HOM05D001490 ORTHO05D001450 2.5e-06 55.8 60 50.0
AUR62023289 Chenopodium quinoa HOM05D001490 ORTHO05D001450 4.2e-06 55.1 68 45.6
CANSAT25G0332 Cannabis sativa HOM05D001490 ORTHO05D001450 5.5e-06 54.7 98 43.9
AUR62009012 Chenopodium quinoa HOM05D001490 ORTHO05D001450 5.5e-06 54.7 64 46.9
AUR62043982 Chenopodium quinoa HOM05D001490 ORTHO05D001450 5.5e-06 54.7 64 46.9
QL10p023806 Quercus lobata HOM05D001490 ORTHO05D001450 5.5e-06 54.7 41 63.4
HanXRQChr05g0146441 Helianthus annuus HOM05D001490 ORTHO05D001450 7.2e-06 54.3 117 40.2
Lj4g0002660 Lotus japonicus HOM05D001490 ORTHO05D001450 7.2e-06 54.3 86 45.3
Ah.10g029220 Amaranthus hybridus HOM05D001490 ORTHO05D001450 9.5e-06 53.9 52 53.8
Thecc.03G030200 Theobroma cacao HOM05D001490 ORTHO05D001450 9.5e-06 53.9 97 38.1


User provided reference genes

Program Settings