Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 5.6e-69 264.2 140 100.0
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 1.9e-45 186.0 146 70.5
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 2.5e-45 185.7 146 69.2
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 7.3e-45 184.1 148 65.5
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.2e-44 183.3 146 69.2
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 1.6e-44 183.0 138 71.0
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 8.1e-44 180.6 150 66.0
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 1.2e-42 176.8 144 68.1
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 3.4e-42 175.3 149 64.4
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 7.6e-42 174.1 147 67.3
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.3e-41 173.3 148 65.5
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 2.9e-41 172.2 148 64.9
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 4.9e-41 171.4 140 65.0
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 6.4e-41 171.0 136 69.1
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 1.1e-40 170.2 134 64.2
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 1.1e-40 170.2 143 65.0
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.1e-40 170.2 143 65.0
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.1e-40 170.2 143 65.0
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.4e-40 169.9 146 61.6
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 1.4e-40 169.9 146 61.6
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.9e-40 169.5 146 65.1
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 4.2e-40 168.3 149 62.4
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 5.4e-40 167.9 150 62.0
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 7.1e-40 167.5 142 66.9
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 1.6e-39 166.4 139 65.5
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 3.5e-39 165.2 141 66.0
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 4.6e-39 164.9 142 64.8
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 4.6e-39 164.9 145 63.4
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 6.0e-39 164.5 135 64.4
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 6.0e-39 164.5 146 61.0
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 7.8e-39 164.1 161 60.2
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.0e-38 163.7 133 66.9
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 1.0e-38 163.7 136 64.7
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.0e-38 163.7 137 64.2
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 1.3e-38 163.3 135 64.4
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.7e-38 162.9 136 64.7
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 2.3e-38 162.5 142 64.1
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 3.9e-38 161.8 149 61.1
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 5.1e-38 161.4 137 64.2
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 5.1e-38 161.4 137 64.2
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 5.1e-38 161.4 138 63.8
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 5.1e-38 161.4 137 63.5
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 5.1e-38 161.4 140 64.3
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 6.6e-38 161.0 138 63.8
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 6.6e-38 161.0 146 63.7
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 8.7e-38 160.6 162 56.2
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 8.7e-38 160.6 144 61.8
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 8.7e-38 160.6 136 64.0
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 8.7e-38 160.6 136 66.2
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 8.7e-38 160.6 148 62.2
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 1.1e-37 160.2 142 63.4
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 1.5e-37 159.8 153 61.4
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 1.9e-37 159.5 141 62.4
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 1.9e-37 159.5 144 62.5
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 2.5e-37 159.1 144 63.2
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 3.3e-37 158.7 140 62.1
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 3.3e-37 158.7 143 60.1
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 5.6e-37 157.9 142 63.4
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 7.3e-37 157.5 127 72.4
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.3e-36 156.8 126 72.2
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 1.6e-36 156.4 140 61.4
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 1.6e-36 156.4 138 63.0
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 6.2e-36 154.5 126 71.4
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 6.2e-36 154.5 149 57.7
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 8.1e-36 154.1 136 64.0
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 8.1e-36 154.1 148 59.5
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 2.4e-35 152.5 136 60.3
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 4.0e-35 151.8 144 57.6
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 1.2e-34 150.2 134 61.2
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 1.2e-34 150.2 145 58.6
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 1.2e-34 150.2 136 61.0
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 1.5e-34 149.8 146 59.6
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 1.5e-34 149.8 136 58.8
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 1.5e-34 149.8 138 63.0
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 2.6e-34 149.1 136 60.3
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 4.5e-34 148.3 144 58.3
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 5.8e-34 147.9 133 63.9
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 9.9e-34 147.1 144 57.6
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 1.7e-33 146.4 135 62.2
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.7e-33 146.4 149 57.7
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 4.9e-33 144.8 136 60.3
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 8.4e-33 144.1 139 56.8
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 1.1e-32 143.7 133 58.6
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 1.1e-32 143.7 137 57.7
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 1.4e-32 143.3 137 59.1
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 2.4e-32 142.5 136 58.8
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 2.4e-32 142.5 136 58.1
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 4.2e-32 141.7 133 59.4
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 4.2e-32 141.7 132 58.3
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 7.1e-32 141.0 137 58.4
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 9.3e-32 140.6 137 58.4
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 3.5e-31 138.7 131 60.3
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 1.0e-30 137.1 136 60.3
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 1.8e-30 136.3 144 56.9
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 1.8e-30 136.3 136 57.4
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 6.7e-30 134.4 136 56.6
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 8.7e-30 134.0 136 56.6
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 1.5e-29 133.3 138 55.1
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 4.3e-29 131.7 134 54.5
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 5.6e-29 131.3 132 56.1
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 3.6e-28 128.6 136 56.6
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 4.8e-28 128.3 143 52.4
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 8.1e-28 127.5 132 54.5
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 1.4e-27 126.7 143 49.7
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 6.9e-27 124.4 133 54.1
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 2.0e-26 122.9 136 55.1
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 5.8e-26 121.3 132 53.0
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 5.8e-26 121.3 132 53.0
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 5.8e-26 121.3 132 53.0
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 5.8e-26 121.3 132 53.0
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 5.8e-26 121.3 132 53.0
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 4.2e-24 115.2 141 48.2
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 2.1e-23 112.8 127 53.5
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 2.7e-23 112.5 129 50.4
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 7.9e-23 110.9 136 49.3
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 7.4e-21 104.4 111 55.9
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.3e-20 103.6 140 45.7
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 8.1e-20 100.9 112 51.8
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 4.0e-19 98.6 134 44.8
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 2.6e-18 95.9 134 44.0
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 7.6e-18 94.4 145 45.5
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 3.8e-17 92.0 112 50.0
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 2.7e-15 85.9 73 63.0
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 1.3e-14 83.6 101 52.5
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 1.5e-13 80.1 67 64.2
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 7.4e-13 77.8 70 60.0
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 2.9e-09 65.9 133 36.1
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 3.8e-09 65.5 46 58.7
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.1e-07 59.7 64 50.0
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 2.7e-07 59.3 124 40.3
Cre01.g031250 Chlamydomonas reinhardtii HOM05D006047 ORTHO05D007353 8.7e-06 54.3 123 35.8


User provided reference genes

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