Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000094 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 0.0e+00 1151.7 590 100.0
CSS0007833 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 0.0e+00 1134.8 592 98.6
Dinv40776 Davidia involucrata HOM05D004902 ORTHO05D006603 3.6e-295 1017.7 562 89.3
Actinidia10742 Actinidia chinensis HOM05D004902 ORTHO05D006603 6.4e-292 1006.9 583 86.1
Hma1.2p1_0036F.1_g023440 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 3.2e-291 1004.6 590 85.8
GSVIVG01037683001 Vitis vinifera HOM05D004902 ORTHO05D006603 4.0e-286 987.6 561 88.4
QL08p009339 Quercus lobata HOM05D004902 ORTHO05D006603 3.4e-285 984.6 552 88.2
ClCG09G010930 Citrullus lanatus HOM05D004902 ORTHO05D006603 3.2e-283 978.0 557 86.7
TAR362G0117 Trochodendron aralioides HOM05D004902 ORTHO05D006603 4.2e-283 977.6 559 86.6
Lj4g0024994 Lotus japonicus HOM05D004902 ORTHO05D006603 7.1e-283 976.9 549 87.8
MELO3C013152.2 Cucumis melo HOM05D004902 ORTHO05D006603 2.1e-282 975.3 555 86.8
TWI39G0824 Tripterygium wilfordii HOM05D004902 ORTHO05D006603 2.7e-282 974.9 588 84.2
Manes.03G132000 Manihot esculenta HOM05D004902 ORTHO05D006603 1.3e-281 972.6 590 83.2
arahy.Tifrunner.gnm1.ann1.67NMHM Arachis hypogaea HOM05D004902 ORTHO05D006603 2.3e-281 971.8 556 86.3
Medtr3g052850 Medicago truncatula HOM05D004902 ORTHO05D006603 8.7e-281 969.9 554 86.5
TPR.G33794 Trifolium pratense HOM05D004902 ORTHO05D006603 1.1e-280 969.5 555 86.3
Atru.chr2.3483 Acer truncatum HOM05D004902 ORTHO05D006603 1.9e-280 968.8 552 86.8
CiPaw.11G191900 Carya illinoinensis HOM05D004902 ORTHO05D006603 2.5e-280 968.4 551 87.5
Ciclev10007818m.g Citrus clementina HOM05D004902 ORTHO05D006603 2.5e-280 968.4 562 85.8
Phvul.006G046400 Phaseolus vulgaris HOM05D004902 ORTHO05D006603 3.3e-280 968.0 544 88.4
Migut.M01740 Erythranthe guttata HOM05D004902 ORTHO05D006603 4.3e-280 967.6 552 86.2
Glyma.18G093200 Glycine max HOM05D004902 ORTHO05D006603 9.6e-280 966.5 549 87.2
SGA_v2.0_scaffold172G39008 Striga asiatica HOM05D004902 ORTHO05D006603 1.6e-279 965.7 552 86.2
Psat5g177120 Pisum sativum HOM05D004902 ORTHO05D006603 2.1e-279 965.3 555 85.9
Cfa020314 Carpinus fangiana HOM05D004902 ORTHO05D006603 3.6e-279 964.5 594 82.2
MSTRG.14441 Avicennia marina HOM05D004902 ORTHO05D006603 6.2e-279 963.8 550 86.2
Eucgr.F00742 Eucalyptus grandis HOM05D004902 ORTHO05D006603 6.2e-279 963.8 594 81.5
Prupe.4G217200 Prunus persica HOM05D004902 ORTHO05D006603 1.4e-278 962.6 575 84.3
Glyma.18G108300 Glycine max HOM05D004902 ORTHO05D006603 1.8e-278 962.2 549 86.7
MD03G1198000 Malus domestica HOM05D004902 ORTHO05D006603 5.3e-278 960.7 552 86.1
arahy.Tifrunner.gnm1.ann1.E3581I Arachis hypogaea HOM05D004902 ORTHO05D006603 6.9e-278 960.3 573 84.1
Gohir.A11G067600 Gossypium hirsutum HOM05D004902 ORTHO05D006603 1.2e-277 959.5 562 84.5
Ca_14752_v3 Cicer arietinum L. HOM05D004902 ORTHO05D006603 2.6e-277 958.4 555 86.1
Lj1A876G36 Lonicera japonica HOM05D004902 ORTHO05D006603 3.4e-277 958.0 569 84.9
Oeu062577.2 Olea europaea HOM05D004902 ORTHO05D006603 4.4e-277 957.6 569 85.2
RcHm_v2.0_Chr5g0040671 Rosa chinensis HOM05D004902 ORTHO05D006603 4.4e-277 957.6 549 86.3
MSTRG.12985 Avicennia marina HOM05D004902 ORTHO05D006603 5.8e-277 957.2 552 85.7
Sed0009199 Sechium edule HOM05D004902 ORTHO05D006603 5.8e-277 957.2 599 80.5
Sc02g0003710 Simmondsia chinensis HOM05D004902 ORTHO05D006603 5.8e-277 957.2 534 88.4
Sopen07g033000 Solanum pennellii HOM05D004902 ORTHO05D006603 5.8e-277 957.2 560 84.5
CAN.G337.72 Capsicum annuum HOM05D004902 ORTHO05D006603 7.6e-277 956.8 560 85.0
Potri.001G267400 Populus trichocarpa HOM05D004902 ORTHO05D006603 1.3e-276 956.1 551 85.3
CANSAT11G1621 Cannabis sativa HOM05D004902 ORTHO05D006603 1.7e-276 955.7 560 84.5
Gohir.D11G071500 Gossypium hirsutum HOM05D004902 ORTHO05D006603 1.7e-276 955.7 562 84.0
Gorai.007G076800 Gossypium raimondii HOM05D004902 ORTHO05D006603 2.9e-276 954.9 562 84.0
Solyc07g064810.3 Solanum lycopersicum HOM05D004902 ORTHO05D006603 2.9e-276 954.9 560 84.3
Hund26666 Selenicereus undatus HOM05D004902 ORTHO05D006603 4.9e-276 954.1 587 82.3
Lalb_Chr10g0107081 Lupinus albus HOM05D004902 ORTHO05D006603 8.4e-276 953.4 560 84.6
PGSC0003DMG400022211 Solanum tuberosum HOM05D004902 ORTHO05D006603 8.4e-276 953.4 560 84.3
Thecc.09G123200 Theobroma cacao HOM05D004902 ORTHO05D006603 1.9e-275 952.2 542 86.2
Duzib264G0382 Durio zibethinus HOM05D004902 ORTHO05D006603 2.4e-275 951.8 551 85.8
THA.LOC104811618 Tarenaya hassleriana HOM05D004902 ORTHO05D006603 1.2e-274 949.5 560 83.6
Potri.009G061700 Populus trichocarpa HOM05D004902 ORTHO05D006603 1.3e-273 946.0 551 84.4
HanXRQChr05g0159411 Helianthus annuus HOM05D004902 ORTHO05D006603 1.7e-273 945.7 555 83.8
HanXRQChr08g0233501 Helianthus annuus HOM05D004902 ORTHO05D006603 2.3e-273 945.3 553 84.3
FAN18G4155 Fragaria x ananassa HOM05D004902 ORTHO05D006603 3.9e-273 944.5 557 84.7
Lsat_1_v5_gn_5_3021 Lactuca sativa HOM05D004902 ORTHO05D006603 3.9e-273 944.5 552 84.2
Aqoxy5G00324 Aquilegia oxysepala HOM05D004902 ORTHO05D006603 8.7e-273 943.3 562 83.6
CARHR234510 Cardamine hirsuta HOM05D004902 ORTHO05D006603 3.3e-272 941.4 560 82.5
Aa31LG3G11010 Aethionema arabicum HOM05D004902 ORTHO05D006603 7.4e-272 940.3 560 83.4
Carub.0007s1395 Capsella rubella HOM05D004902 ORTHO05D006603 1.3e-271 939.5 551 83.5
ECA246G3742 Erigeron canadensis HOM05D004902 ORTHO05D006603 2.1e-271 938.7 548 85.0
AL7G25950 Arabidopsis lyrata HOM05D004902 ORTHO05D006603 4.8e-271 937.6 551 83.3
FAN13G3021 Fragaria x ananassa HOM05D004902 ORTHO05D006603 8.1e-271 936.8 571 82.7
PGR083G1168 Punica granatum HOM05D004902 ORTHO05D006603 8.1e-271 936.8 552 84.6
FAN04G1963 Fragaria x ananassa HOM05D004902 ORTHO05D006603 2.4e-270 935.3 581 82.3
Sp7g24850 Schrenkiella parvula HOM05D004902 ORTHO05D006603 3.1e-270 934.9 560 82.3
C04p45770 Brassica napus HOM05D004902 ORTHO05D006603 6.9e-270 933.7 560 82.3
Thhalv10024744m.g Eutrema salsugineum HOM05D004902 ORTHO05D006603 1.5e-269 932.6 553 82.5
C01p23080 Brassica napus HOM05D004902 ORTHO05D006603 2.0e-269 932.2 560 81.8
CDE02G3624 Ceratophyllum demersum HOM05D004902 ORTHO05D006603 2.0e-269 932.2 541 84.3
A04p12110 Brassica napus HOM05D004902 ORTHO05D006603 4.5e-269 931.0 594 78.8
AT4G26900 Arabidopsis thaliana HOM05D004902 ORTHO05D006603 5.8e-269 930.6 595 78.2
BolC4t26162H Brassica oleracea HOM05D004902 ORTHO05D006603 3.8e-268 927.9 562 82.0
BcaB06g27301 Brassica carinata HOM05D004902 ORTHO05D006603 4.9e-268 927.5 560 81.8
BolC1t02242H Brassica oleracea HOM05D004902 ORTHO05D006603 7.1e-267 923.7 562 81.1
COL.COLO4_19537 Corchorus olitorius HOM05D004902 ORTHO05D006603 2.1e-266 922.2 542 83.9
ATR0736G184 Amborella trichopoda HOM05D004902 ORTHO05D006603 4.6e-266 921.0 543 84.9
Nn8g38868 Nelumbo nucifera HOM05D004902 ORTHO05D006603 6.0e-266 920.6 533 85.6
Oeu013136.2 Olea europaea HOM05D004902 ORTHO05D006603 6.0e-266 920.6 599 79.3
Rhsim06G0219700 Rhododendron simsii HOM05D004902 ORTHO05D006603 1.3e-265 919.5 576 79.9
EL10Ac1g01638 Beta vulgaris HOM05D004902 ORTHO05D006603 5.3e-262 907.5 555 80.9
BcaNung03568 Brassica carinata HOM05D004902 ORTHO05D006603 6.9e-262 907.1 560 80.4
BraA04t16876Z Brassica rapa HOM05D004902 ORTHO05D006603 2.0e-261 905.6 622 75.4
AUR62026758 Chenopodium quinoa HOM05D004902 ORTHO05D006603 1.0e-260 903.3 574 79.3
Gorai.011G209600 Gossypium raimondii HOM05D004902 ORTHO05D006603 4.2e-259 897.9 562 81.1
Gohir.D10G186800 Gossypium hirsutum HOM05D004902 ORTHO05D006603 2.3e-257 892.1 562 80.8
Haze_09705 Corylus avellana HOM05D004902 ORTHO05D006603 3.0e-257 891.7 594 77.3
vmacro02220 Vaccinium macrocarpon HOM05D004902 ORTHO05D006603 8.7e-257 890.2 634 73.8
FAN08G0007 Fragaria x ananassa HOM05D004902 ORTHO05D006603 1.1e-251 873.2 549 80.7
Os03g0256400 Oryza sativa ssp. japonica HOM05D004902 ORTHO05D006603 1.2e-250 869.8 547 77.7
HPP92_013494 Vanilla planifolia HOM05D004902 ORTHO05D006603 2.1e-250 869.0 548 77.7
PSO210G2842 Papaver somniferum HOM05D004902 ORTHO05D006603 2.5e-248 862.1 559 79.1
Sabra16G0163900 Salix brachista HOM05D004902 ORTHO05D006603 4.3e-248 861.3 616 72.7
HPP92_026047 Vanilla planifolia HOM05D004902 ORTHO05D006603 4.3e-248 861.3 542 78.2
FvH4_5g29730 Fragaria vesca HOM05D004902 ORTHO05D006603 5.7e-248 860.9 479 88.1
PSO832G3378 Papaver somniferum HOM05D004902 ORTHO05D006603 1.6e-247 859.4 559 78.9
Peaxi162Scf00235g00424 Petunia axillaris HOM05D004902 ORTHO05D006603 1.3e-244 849.7 576 76.2
Gohir.A10G179900 Gossypium hirsutum HOM05D004902 ORTHO05D006603 3.8e-244 848.2 577 76.4
CsaV3_7G021940 Cucumis sativus L. HOM05D004902 ORTHO05D006603 2.5e-243 845.5 481 86.1
Ah.13g076200 Amaranthus hybridus HOM05D004902 ORTHO05D006603 3.6e-242 841.6 555 77.7
AagrBONN_evm.TU.Sc2ySwM_117.3547 Anthoceros agrestis HOM05D004902 ORTHO05D006603 2.5e-235 818.9 551 73.0
Nitab4.5_0022774g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 3.3e-232 808.5 463 85.3
Hma1.2p1_0036F.1_g023430 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 2.4e-230 802.4 481 83.2
Mapoly0071s0086 Marchantia polymorpha HOM05D004902 ORTHO05D006603 1.2e-229 800.0 541 73.2
DCAR_022578 Daucus carota HOM05D004902 ORTHO05D006603 2.9e-228 795.4 551 74.4
Pp3c1_20280 Physcomitrium patens HOM05D004902 ORTHO05D006603 4.0e-225 785.0 551 71.7
SMO119G0352 Selaginella moellendorffii HOM05D004902 ORTHO05D006603 4.0e-225 785.0 533 73.4
CBR_g4356 Chara braunii HOM05D004902 ORTHO05D006603 2.2e-223 779.2 559 69.6
unitig_85.g27329 Utricularia gibba HOM05D004902 ORTHO05D006603 5.9e-213 744.6 525 72.4
AUR62013514 Chenopodium quinoa HOM05D004902 ORTHO05D006603 2.7e-210 735.7 560 69.3
CAN.G677.16 Capsicum annuum HOM05D004902 ORTHO05D006603 1.0e-196 690.6 553 67.5
Nitab4.5_0013139g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 1.9e-195 686.4 405 84.4
MCO02G311 Micromonas commoda HOM05D004902 ORTHO05D006603 1.2e-186 657.1 559 60.3
HanXRQChr08g0233821 Helianthus annuus HOM05D004902 ORTHO05D006603 2.4e-169 599.7 409 76.0
MD11G1214000 Malus domestica HOM05D004902 ORTHO05D006603 5.4e-166 588.6 341 86.5
PRCOL_00006765 Prasinoderma coloniale HOM05D004902 ORTHO05D006603 1.9e-163 580.1 510 58.8
Zm00001eb011150 Zea mays HOM05D004902 ORTHO05D006603 4.3e-163 578.9 356 81.7
A01p18110 Brassica napus HOM05D004902 ORTHO05D006603 5.8e-160 568.5 554 58.5
Cfa025092 Carpinus fangiana HOM05D004902 ORTHO05D006603 1.8e-153 547.0 544 53.1
Cre11.g481500 Chlamydomonas reinhardtii HOM05D004902 ORTHO05D006603 1.3e-135 487.6 566 48.9
Cpa.g.sc12.277 Carica papaya HOM05D004902 ORTHO05D006603 1.9e-131 473.8 257 90.7
Cpa.g.c34168 Carica papaya HOM05D004902 ORTHO05D006603 1.7e-95 354.4 210 80.5
MD11G1213900 Malus domestica HOM05D004902 ORTHO05D006603 2.8e-93 347.1 188 86.2
Glyma.08G323300 Glycine max HOM05D004902 ORTHO05D006603 1.7e-74 284.6 208 67.8
Lsat_1_v5_gn_3_2301 Lactuca sativa HOM05D004902 ORTHO05D006603 1.2e-69 268.5 413 43.3
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 1.2e-56 225.3 198 58.1
SEGI_16435 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 8.7e-47 192.6 116 81.9
RcHm_v2.0_Chr4g0412471 Rosa chinensis HOM05D004902 ORTHO05D006603 4.8e-45 186.8 153 64.7
VMungo0540G1125 Vigna mungo HOM05D004902 ORTHO05D006603 1.2e-43 182.2 112 82.1
SEGI_31768 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 1.9e-38 164.9 118 65.3
BraA01t01766Z Brassica rapa HOM05D004902 ORTHO05D006603 2.8e-37 161.0 102 78.4
Aqoxy84s005 Aquilegia oxysepala HOM05D004902 ORTHO05D038539 1.8e-31 141.7 314 33.1
Lsat_1_v5_gn_0_44000 Lactuca sativa HOM05D004902 ORTHO05D038539 2.4e-28 131.3 312 33.3
Glyma.08G319400 Glycine max HOM05D004902 ORTHO05D029739 2.6e-27 127.9 73 89.0
FvH4_6g25500 Fragaria vesca HOM05D000003 ORTHO05D000007 3.1e-20 104.4 58 86.2
BcaNung03560 Brassica carinata HOM05D004902 ORTHO05D006603 1.1e-17 95.9 57 78.9
TPR.G39977 Trifolium pratense HOM05D004902 ORTHO05D006603 4.3e-14 84.0 43 83.7
Lsat_1_v5_gn_3_69341 Lactuca sativa HOM05D004902 ORTHO05D006603 8.2e-13 79.7 126 41.3
Ah.01g018890 Amaranthus hybridus HOM05D004902 ORTHO05D006603 1.4e-12 79.0 123 41.5
Lsat_1_v5_gn_4_11281 Lactuca sativa HOM05D004902 ORTHO05D006603 5.3e-12 77.0 107 44.9
SEGI_35364 Sequoiadendron giganteum HOM05D004902 ORTHO05D025756 2.0e-11 75.1 45 71.1
TWI38G0888 Tripterygium wilfordii HOM05D004902 ORTHO05D029739 1.7e-10 72.0 70 62.9
HanXRQChr08g0233831 Helianthus annuus HOM05D004902 ORTHO05D006603 1.1e-09 69.3 42 78.6
GSVIVG01021644001 Vitis vinifera HOM05D004902 ORTHO05D024725 4.2e-09 67.4 35 80.0
BcaNung03565 Brassica carinata HOM05D004902 ORTHO05D006603 9.4e-09 66.2 58 62.1
RcHm_v2.0_Chr5g0040621 Rosa chinensis HOM05D004902 ORTHO05D006603 6.1e-08 63.5 37 83.8
Lsat_1_v5_gn_0_720 Lactuca sativa HOM05D004902 ORTHO05D029739 8.8e-07 59.7 55 58.2
Lsat_1_v5_gn_5_36061 Lactuca sativa HOM05D004902 ORTHO05D025756 2.0e-06 58.5 44 61.4
Lsat_1_v5_gn_2_18401 Lactuca sativa HOM05D004902 ORTHO05D233888 7.4e-06 56.6 112 36.6


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