Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 0.0e+00 1272.7 672 100.0
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 0.0e+00 1261.5 672 99.1
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 4.3e-268 927.9 657 75.8
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 9.9e-265 916.8 663 75.3
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 9.0e-258 893.6 665 74.0
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.3e-256 889.8 682 72.1
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 5.9e-241 837.8 690 68.8
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 5.9e-241 837.8 662 69.2
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.4e-229 800.0 604 72.4
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 8.2e-227 790.8 659 67.4
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 2.5e-223 779.2 643 68.0
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 2.2e-219 766.1 661 65.4
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 3.1e-218 762.3 661 65.1
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 3.5e-217 758.8 658 65.5
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 7.2e-215 751.1 666 63.2
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 2.7e-214 749.2 657 64.1
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 8.0e-214 747.7 661 64.3
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 1.2e-212 743.8 655 64.9
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 2.8e-211 739.2 649 63.6
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 2.8e-211 739.2 661 64.6
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.8e-210 736.5 658 63.7
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 2.0e-209 733.0 660 61.7
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 7.7e-209 731.1 662 63.4
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 5.7e-204 714.9 658 61.6
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 2.8e-203 712.6 688 60.6
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 5.4e-202 708.4 660 59.7
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 3.5e-201 705.7 690 58.8
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 1.0e-200 704.1 654 60.6
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 1.3e-200 703.7 655 60.8
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 8.5e-200 701.0 645 62.5
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.5e-199 700.3 674 60.8
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 3.2e-199 699.1 674 60.7
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 5.5e-199 698.4 648 60.3
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 2.1e-198 696.4 657 59.7
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 8.0e-198 694.5 648 60.2
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 5.2e-197 691.8 652 60.9
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 7.5e-196 688.0 717 56.5
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 3.7e-195 685.6 644 61.2
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 3.1e-194 682.6 639 59.9
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.3e-192 677.2 650 58.5
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 3.3e-191 672.5 646 60.4
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 5.6e-191 671.8 646 60.2
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.2e-190 670.6 668 57.0
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 1.6e-190 670.2 640 59.7
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 6.1e-190 668.3 663 59.0
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.2e-188 664.1 642 59.7
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 2.0e-188 663.3 664 59.6
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 2.9e-187 659.4 669 57.8
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 9.2e-186 654.4 629 59.9
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 1.2e-185 654.1 628 59.7
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 5.9e-185 651.7 654 58.4
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 1.7e-184 650.2 654 57.8
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 2.5e-183 646.4 799 50.6
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 8.0e-182 641.3 655 57.4
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 3.4e-180 636.0 648 56.2
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.3e-179 634.0 664 57.7
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 2.9e-179 632.9 648 57.1
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 1.2e-177 627.5 527 64.9
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 1.2e-177 627.5 687 53.3
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 2.7e-177 626.3 671 57.1
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 4.3e-175 619.0 768 49.5
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 1.2e-172 610.9 648 55.1
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 2.7e-169 599.7 600 58.0
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 3.0e-168 596.3 666 55.1
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 1.1e-165 587.8 648 53.2
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 4.4e-164 582.4 652 53.4
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 8.4e-163 578.2 652 53.4
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 9.2e-162 574.7 631 53.6
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 1.0e-160 571.2 422 72.0
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 5.1e-160 568.9 650 52.3
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 8.6e-160 568.2 650 51.8
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 1.5e-156 557.4 597 54.1
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 2.6e-156 556.6 655 51.3
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 9.9e-156 554.7 648 52.2
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 1.9e-154 550.4 529 59.2
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 3.5e-153 546.2 681 49.6
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 1.1e-151 541.2 680 49.4
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 3.3e-151 539.7 681 49.3
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 4.3e-151 539.3 683 49.0
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 5.6e-151 538.9 704 48.2
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 1.2e-148 531.2 707 47.7
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 2.0e-148 530.4 656 47.7
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 2.0e-148 530.4 454 64.3
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 4.9e-147 525.8 660 47.7
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 9.3e-146 521.5 455 64.4
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 7.9e-145 518.5 665 48.7
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 5.8e-140 502.3 475 60.6
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 1.8e-136 490.7 526 56.3
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 1.8e-136 490.7 668 45.5
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 6.5e-131 472.2 654 46.0
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 7.9e-129 465.3 503 54.9
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 2.8e-126 456.8 671 42.8
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 1.8e-125 454.1 659 46.3
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 9.0e-125 451.8 710 41.7
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 2.5e-119 433.7 661 41.9
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 9.7e-119 431.8 665 42.4
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 3.1e-117 426.8 484 53.7
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 3.8e-115 419.9 650 42.8
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 3.9e-112 409.8 455 55.8
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 5.3e-109 399.4 423 55.8
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 5.5e-98 362.8 505 45.1
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 2.0e-92 344.4 845 33.7
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.8e-91 340.1 307 68.4
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 2.9e-83 313.9 505 40.8
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.8e-77 294.7 216 72.2
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 1.2e-65 255.4 267 60.7
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 1.2e-65 255.4 332 50.0
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 3.2e-61 240.7 165 77.6
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 5.4e-61 240.0 216 62.5
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 4.0e-56 223.8 150 80.0
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 1.4e-53 215.3 809 27.4
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 2.7e-52 211.1 153 71.2
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 1.1e-50 205.7 751 27.4
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.6e-49 201.8 219 52.1
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 4.1e-45 187.2 195 54.9
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 8.4e-38 162.9 309 38.8
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 1.4e-32 145.6 189 43.9
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 1.0e-27 129.4 101 66.3
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.3e-25 122.5 103 68.9
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.3e-25 122.5 147 56.5
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 4.0e-24 117.5 90 78.9
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 5.8e-23 113.6 78 74.4
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.1e-12 78.6 99 47.5
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 6.0e-12 77.0 52 71.2
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 2.3e-11 75.1 96 44.8
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 3.0e-11 74.7 47 78.7
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 2.2e-09 68.6 134 37.3
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 4.8e-09 67.4 41 87.8
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 4.8e-09 67.4 93 41.9
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 6.9e-08 63.5 50 72.0


User provided reference genes

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