Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 1.0e-60 236.5 116 100.0
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 1.7e-42 176.0 141 66.0
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 4.5e-40 167.9 141 62.4
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 1.0e-39 166.8 140 63.6
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 1.7e-39 166.0 139 63.3
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.2e-39 165.6 139 61.9
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.2e-39 165.6 139 61.9
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 5.0e-39 164.5 139 61.9
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 7.2e-38 160.6 142 62.0
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 1.2e-37 159.8 139 62.6
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 6.1e-37 157.5 139 60.4
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 6.1e-37 157.5 139 59.0
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 7.9e-37 157.1 136 62.5
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 3.0e-36 155.2 142 56.3
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 3.0e-36 155.2 139 60.4
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 3.9e-36 154.8 138 60.1
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 2.0e-35 152.5 140 58.6
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 3.3e-35 151.8 138 58.7
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 3.3e-35 151.8 140 57.9
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 3.3e-35 151.8 142 57.0
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 4.4e-35 151.4 139 58.3
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 5.7e-35 151.0 137 59.9
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 5.7e-35 151.0 138 57.2
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 7.4e-35 150.6 139 59.0
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 7.4e-35 150.6 141 56.0
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 1.7e-34 149.4 142 58.5
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 1.7e-34 149.4 140 57.1
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 2.2e-34 149.1 135 60.0
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 2.2e-34 149.1 141 56.0
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 2.8e-34 148.7 142 53.5
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 8.2e-34 147.1 142 57.0
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 8.2e-34 147.1 142 53.5
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 8.2e-34 147.1 143 57.3
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 1.8e-33 146.0 134 59.0
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 1.8e-33 146.0 131 58.0
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 2.4e-33 145.6 135 58.5
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 4.1e-33 144.8 137 55.5
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 4.1e-33 144.8 122 63.9
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 4.1e-33 144.8 135 58.5
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 5.3e-33 144.4 138 56.5
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 5.3e-33 144.4 138 56.5
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 7.0e-33 144.1 138 53.6
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 7.0e-33 144.1 135 57.8
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 7.0e-33 144.1 135 57.8
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 7.0e-33 144.1 140 57.1
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 1.2e-32 143.3 143 57.3
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 2.0e-32 142.5 138 55.1
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 3.5e-32 141.7 134 59.0
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 5.9e-32 141.0 142 55.6
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 5.9e-32 141.0 135 58.5
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 5.9e-32 141.0 135 57.8
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 5.9e-32 141.0 135 57.8
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 5.9e-32 141.0 135 56.3
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 7.7e-32 140.6 134 55.2
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 7.7e-32 140.6 134 55.2
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 7.7e-32 140.6 134 55.2
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 7.7e-32 140.6 134 55.2
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 7.7e-32 140.6 134 55.2
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 7.7e-32 140.6 134 55.2
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 7.7e-32 140.6 139 55.4
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 7.7e-32 140.6 134 56.0
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 1.0e-31 140.2 139 54.7
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 1.0e-31 140.2 134 55.2
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 1.0e-31 140.2 135 54.8
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 1.0e-31 140.2 134 55.2
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 1.7e-31 139.4 135 57.8
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.2e-31 139.0 139 54.0
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 3.8e-31 138.3 139 52.5
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 5.0e-31 137.9 134 54.5
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 6.5e-31 137.5 139 55.4
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 8.5e-31 137.1 134 54.5
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 8.5e-31 137.1 134 54.5
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.1e-30 136.7 143 53.1
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 1.1e-30 136.7 136 53.7
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 1.1e-30 136.7 134 53.7
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 1.1e-30 136.7 139 54.0
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 1.9e-30 136.0 109 64.2
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 1.9e-30 136.0 135 56.3
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 2.5e-30 135.6 135 57.0
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 3.2e-30 135.2 134 52.2
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 3.2e-30 135.2 128 58.6
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 3.2e-30 135.2 137 54.7
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 4.2e-30 134.8 135 52.6
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 7.2e-30 134.0 135 55.6
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 9.4e-30 133.7 140 52.9
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 1.6e-29 132.9 138 52.9
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 2.7e-29 132.1 129 58.1
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 3.6e-29 131.7 135 51.9
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 4.7e-29 131.3 135 53.3
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 4.7e-29 131.3 135 53.3
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 6.1e-29 131.0 135 52.6
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 6.1e-29 131.0 135 52.6
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 6.7e-28 127.5 125 54.4
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 8.8e-28 127.1 142 49.3
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.1e-27 126.7 143 50.3
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.5e-27 126.3 143 50.3
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.4e-27 124.8 143 49.0
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 8.2e-26 120.6 109 60.6
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 7.7e-24 114.0 126 49.2
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 1.7e-23 112.8 86 66.3
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 2.2e-23 112.5 131 45.8
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 8.5e-23 110.5 113 54.9
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 8.5e-23 110.5 139 49.6
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 1.1e-22 110.2 130 46.2
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 7.2e-22 107.5 113 54.9
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 1.6e-21 106.3 88 61.4
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 6.1e-21 104.4 114 54.4
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.8e-20 102.8 161 41.0
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 1.3e-18 96.7 72 62.5
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.1e-17 92.0 157 40.8
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 4.1e-17 91.7 131 45.8
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 4.1e-17 91.7 102 50.0
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 3.2e-14 82.0 96 49.0
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 3.0e-12 75.5 96 47.9
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 2.8e-10 68.9 112 39.3
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 3.7e-10 68.6 43 74.4
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 6.3e-10 67.8 117 34.2
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 3.1e-09 65.5 129 36.4
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 9.1e-09 63.9 37 75.7
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 1.3e-07 60.1 35 74.3
SEGI_40910 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 1.3e-07 60.1 45 60.0
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 3.3e-06 55.5 96 37.5
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 5.5e-06 54.7 90 35.6


User provided reference genes

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