Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000028 Camellia sinensis var. sinensis HOM05D010279 ORTHO05D011203 5.1e-29 130.6 75 100.0
MBI03_g11401_MAGBIO Magnolia biondii HOM05D010279 ORTHO05D011203 1.0e-16 89.7 64 70.3
Potri.006G108901 Populus trichocarpa HOM05D010279 ORTHO05D011203 2.7e-14 81.6 58 69.0
COL.COLO4_08296 Corchorus olitorius HOM05D010279 ORTHO05D011203 3.0e-13 78.2 51 62.7
Lalb_Chr11g0067761 Lupinus albus HOM05D010279 ORTHO05D011203 3.7e-11 71.2 40 60.0
Lalb_Chr08g0239211 Lupinus albus HOM05D010279 ORTHO05D011203 8.3e-11 70.1 37 67.6
Psat5g068480 Pisum sativum HOM05D010279 ORTHO05D011203 2.4e-10 68.6 42 69.0
Nn5g26841 Nelumbo nucifera HOM05D010279 ORTHO05D011203 4.1e-10 67.8 34 76.5
Thecc.10G178900 Theobroma cacao HOM05D012883 ORTHO05D011203 7.0e-10 67.0 51 60.8
Glyma.04G223100 Glycine max HOM05D010279 ORTHO05D011203 2.0e-09 65.5 40 60.0
Cpa.g.sc86.62 Carica papaya HOM05D010279 ORTHO05D011203 4.5e-09 64.3 34 73.5
Glyma.06G142200 Glycine max HOM05D010279 ORTHO05D011203 4.5e-09 64.3 39 61.5
Potri.019G059000 Populus trichocarpa HOM05D010279 ORTHO05D011203 4.5e-09 64.3 40 65.0
Thecc.04G151000 Theobroma cacao HOM05D010279 ORTHO05D011203 4.5e-09 64.3 37 67.6
Phvul.009G043300 Phaseolus vulgaris HOM05D010279 ORTHO05D011203 1.3e-08 62.8 49 51.0
Os05g0323400 Oryza sativa ssp. japonica HOM05D010279 ORTHO05D011203 2.2e-08 62.0 42 54.8
Ciclev10013263m.g Citrus clementina HOM05D010279 ORTHO05D011203 1.1e-07 59.7 34 64.7
Migut.F01234 Erythranthe guttata HOM05D029897 ORTHO05D011203 1.1e-07 59.7 43 51.2
Eucgr.G03142 Eucalyptus grandis HOM05D010279 ORTHO05D011203 1.1e-07 59.7 38 60.5
Manes.09G118475 Manihot esculenta HOM05D010279 ORTHO05D011203 4.2e-07 57.8 34 64.7
HanXRQChr07g0204071 Helianthus annuus HOM05D029897 ORTHO05D011203 5.5e-07 57.4 44 45.5
TPR.G24271 Trifolium pratense HOM05D010279 ORTHO05D011203 7.2e-07 57.0 40 52.5
Prupe.6G294500 Prunus persica HOM05D012883 ORTHO05D011203 1.6e-06 55.8 34 58.8
Glyma.07G108000 Glycine max HOM05D010279 ORTHO05D011203 2.7e-06 55.1 51 54.9
FAN03G0458 Fragaria x ananassa HOM05D012883 ORTHO05D011203 3.6e-06 54.7 33 63.6
RcHm_v2.0_Chr1g0372361 Rosa chinensis HOM05D012883 ORTHO05D011203 4.7e-06 54.3 33 63.6


User provided reference genes

Program Settings