Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_38544 Corchorus olitorius HOM05D005752 ORTHO05D006959 1.2e-58 229.6 111 100.0
Rhsim08G0128600 Rhododendron simsii HOM05D005752 ORTHO05D006959 1.0e-33 146.7 180 50.6
ATR0124G026 Amborella trichopoda HOM05D005752 ORTHO05D006959 8.1e-31 137.1 109 71.6
Hund06741 Selenicereus undatus HOM05D005752 ORTHO05D006959 1.1e-30 136.7 109 71.6
arahy.Tifrunner.gnm1.ann1.LY2Y4A Arachis hypogaea HOM05D005752 ORTHO05D006959 1.4e-30 136.3 107 72.0
arahy.Tifrunner.gnm1.ann1.CL4QH0 Arachis hypogaea HOM05D005752 ORTHO05D006959 1.8e-30 136.0 105 73.3
Ciclev10024397m.g Citrus clementina HOM05D005752 ORTHO05D006959 1.8e-30 136.0 105 73.3
VMungo0464G0712 Vigna mungo HOM05D005752 ORTHO05D006959 3.1e-30 135.2 107 71.0
CsaV3_1G005270 Cucumis sativus L. HOM05D005752 ORTHO05D006959 4.0e-30 134.8 105 72.4
FAN18G3658 Fragaria x ananassa HOM05D005752 ORTHO05D006959 4.0e-30 134.8 106 70.8
AUR62041602 Chenopodium quinoa HOM05D005752 ORTHO05D006959 6.9e-30 134.0 113 66.4
RcHm_v2.0_Chr7g0218081 Rosa chinensis HOM05D005752 ORTHO05D006959 6.9e-30 134.0 105 71.4
FAN08G2690 Fragaria x ananassa HOM05D005752 ORTHO05D006959 9.0e-30 133.7 106 69.8
Duzib205G1872 Durio zibethinus HOM05D005752 ORTHO05D006959 1.2e-29 133.3 107 72.0
AUR62040639 Chenopodium quinoa HOM05D005752 ORTHO05D006959 1.5e-29 132.9 109 70.6
Sc10g0008680 Simmondsia chinensis HOM05D005752 ORTHO05D006959 1.5e-29 132.9 105 71.4
Cfa017810 Carpinus fangiana HOM05D005752 ORTHO05D006959 2.0e-29 132.5 107 69.2
HPP92_021122 Vanilla planifolia HOM05D005752 ORTHO05D006959 2.0e-29 132.5 105 71.4
Gohir.A07G062900 Gossypium hirsutum HOM05D005752 ORTHO05D006959 2.6e-29 132.1 107 71.0
Gohir.D07G067500 Gossypium hirsutum HOM05D005752 ORTHO05D006959 2.6e-29 132.1 107 71.0
Gorai.001G071100 Gossypium raimondii HOM05D005752 ORTHO05D006959 2.6e-29 132.1 107 71.0
Eucgr.H00664 Eucalyptus grandis HOM05D005752 ORTHO05D006959 5.8e-29 131.0 107 70.1
Glyma.09G161000 Glycine max HOM05D005752 ORTHO05D006959 5.8e-29 131.0 107 70.1
Glyma.16G210400 Glycine max HOM05D005752 ORTHO05D006959 5.8e-29 131.0 107 70.1
PGR083G1308 Punica granatum HOM05D005752 ORTHO05D006959 5.8e-29 131.0 107 69.2
CDE04G3451 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 7.6e-29 130.6 107 68.2
Lj2g0008613 Lotus japonicus HOM05D005752 ORTHO05D006959 7.6e-29 130.6 107 69.2
Lalb_Chr14g0370131 Lupinus albus HOM05D005752 ORTHO05D006959 7.6e-29 130.6 111 68.5
Prupe.1G588300 Prunus persica HOM05D005752 ORTHO05D006959 7.6e-29 130.6 107 69.2
EL10Ac8g19469 Beta vulgaris HOM05D005752 ORTHO05D006959 9.9e-29 130.2 105 71.4
Manes.15G187700 Manihot esculenta HOM05D005752 ORTHO05D006959 1.3e-28 129.8 107 69.2
FvH4_5g27080 Fragaria vesca HOM05D005752 ORTHO05D006959 1.7e-28 129.4 107 68.2
Sed0024837 Sechium edule HOM05D005752 ORTHO05D006959 1.7e-28 129.4 107 68.2
SEGI_37918 Sequoiadendron giganteum HOM05D005752 ORTHO05D006959 1.7e-28 129.4 107 69.2
Lj5C168T8 Lonicera japonica HOM05D005752 ORTHO05D006959 2.9e-28 128.6 105 70.5
Nn4g25057 Nelumbo nucifera HOM05D005752 ORTHO05D006959 2.9e-28 128.6 104 70.2
TAR472G0004 Trochodendron aralioides HOM05D005752 ORTHO05D006959 2.9e-28 128.6 107 68.2
HanXRQChr04g0126291 Helianthus annuus HOM05D005752 ORTHO05D006959 3.8e-28 128.3 105 70.5
PGSC0003DMG400015277 Solanum tuberosum HOM05D005752 ORTHO05D006959 3.8e-28 128.3 105 68.6
Os02g0637900 Oryza sativa ssp. japonica HOM05D005752 ORTHO05D006959 4.9e-28 127.9 102 70.6
TWI81G0144 Tripterygium wilfordii HOM05D005752 ORTHO05D006959 6.4e-28 127.5 102 70.6
Atru.chr9.27 Acer truncatum HOM05D005752 ORTHO05D006959 8.4e-28 127.1 107 69.2
Aqoxy3G04339 Aquilegia oxysepala HOM05D005752 ORTHO05D006959 8.4e-28 127.1 107 67.3
TAR636G2449 Trochodendron aralioides HOM05D005752 ORTHO05D006959 8.4e-28 127.1 107 67.3
Oeu038392.3 Olea europaea HOM05D005752 ORTHO05D006959 1.1e-27 126.7 105 69.5
CiPaw.15G108100 Carya illinoinensis HOM05D005752 ORTHO05D006959 1.4e-27 126.3 107 67.3
Cc00_g01570 Coffea canephora HOM05D005752 ORTHO05D006959 1.4e-27 126.3 108 67.6
ECA232G1540 Erigeron canadensis HOM05D005752 ORTHO05D006959 1.9e-27 125.9 107 68.2
PSO063G6484 Papaver somniferum HOM05D005752 ORTHO05D006959 1.9e-27 125.9 107 67.3
PSO782G4127 Papaver somniferum HOM05D005752 ORTHO05D006959 1.9e-27 125.9 107 67.3
ClCG04G012440 Citrullus lanatus HOM05D005752 ORTHO05D006959 2.4e-27 125.6 113 61.1
CANSAT80G0630 Cannabis sativa HOM05D005752 ORTHO05D006959 3.2e-27 125.2 107 68.2
THA.LOC104812187 Tarenaya hassleriana HOM05D005752 ORTHO05D006959 4.2e-27 124.8 102 70.6
CAN.G65.61 Capsicum annuum HOM05D005752 ORTHO05D006959 1.2e-26 123.2 105 65.7
CDE08G1652 Ceratophyllum demersum HOM05D005752 ORTHO05D006959 1.6e-26 122.9 103 67.0
CSS0040154 Camellia sinensis var. sinensis HOM05D005752 ORTHO05D006959 2.1e-26 122.5 107 66.4
Migut.O00287 Erythranthe guttata HOM05D005752 ORTHO05D006959 2.1e-26 122.5 102 68.6
Actinidia06837 Actinidia chinensis HOM05D005752 ORTHO05D006959 2.7e-26 122.1 107 66.4
Zm00001eb185640 Zea mays HOM05D005752 ORTHO05D006959 3.5e-26 121.7 102 68.6
Nitab4.5_0000477g0100 Nicotiana tabacum HOM05D005752 ORTHO05D006959 6.0e-26 120.9 110 65.5
BcaB03g15052 Brassica carinata HOM05D005752 ORTHO05D006959 7.9e-26 120.6 110 65.5
BcaB03g15707 Brassica carinata HOM05D005752 ORTHO05D006959 2.3e-25 119.0 107 66.4
BraA07t30622Z Brassica rapa HOM05D005752 ORTHO05D006959 2.3e-25 119.0 110 64.5
BolC6t38521H Brassica oleracea HOM05D005752 ORTHO05D006959 3.0e-25 118.6 108 64.8
Pp3c16_8600 Physcomitrium patens HOM05D005752 ORTHO05D006959 3.9e-25 118.2 108 64.8
Pp3c25_5680 Physcomitrium patens HOM05D005752 ORTHO05D006959 3.9e-25 118.2 108 64.8
BcaC08g45648 Brassica carinata HOM05D005752 ORTHO05D006959 5.1e-25 117.9 107 65.4
DCAR_023237 Daucus carota HOM05D005752 ORTHO05D006959 6.7e-25 117.5 105 67.6
Carub.0002s2009 Capsella rubella HOM05D005752 ORTHO05D006959 2.5e-24 115.5 102 68.6
AT1G73350 Arabidopsis thaliana HOM05D005752 ORTHO05D006959 5.6e-24 114.4 102 67.6
BraA07t31481Z Brassica rapa HOM05D005752 ORTHO05D006959 1.3e-23 113.2 109 65.1
Sabra04G0044500 Salix brachista HOM05D005752 ORTHO05D006959 2.1e-23 112.5 108 67.6
Nitab4.5_0009307g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 1.8e-22 109.4 95 66.3
A07p39320 Brassica napus HOM05D005752 ORTHO05D006959 2.4e-22 109.0 109 63.3
MELO3C001966.2 Cucumis melo HOM05D005752 ORTHO05D006959 3.1e-22 108.6 204 39.7
Nitab4.5_0008182g0060 Nicotiana tabacum HOM05D005752 ORTHO05D006959 4.0e-22 108.2 95 65.3
Sp5g28280 Schrenkiella parvula HOM05D005752 ORTHO05D006959 4.0e-22 108.2 100 65.0
Potri.004G066700 Populus trichocarpa HOM05D005752 ORTHO05D006959 5.3e-22 107.8 110 64.5
Nitab4.5_0005315g0030 Nicotiana tabacum HOM05D005752 ORTHO05D006959 7.6e-21 104.0 96 64.6
vmacro17761 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 1.7e-20 102.8 179 43.6
A07p29840 Brassica napus HOM05D005752 ORTHO05D006959 2.2e-20 102.4 131 52.7
Lsat_1_v5_gn_6_23301 Lactuca sativa HOM05D005752 ORTHO05D006959 2.9e-20 102.1 90 66.7
unitig_0.g1238 Utricularia gibba HOM05D000376 ORTHO05D000237 1.9e-19 99.4 106 56.6
SalBow5G5648 Salvia bowleyana HOM05D005752 ORTHO05D006959 4.6e-18 94.7 87 63.2
GSVIVG01024241001 Vitis vinifera HOM05D005752 ORTHO05D006959 1.9e-16 89.4 43 90.7
Ca_25284_v3 Cicer arietinum L. HOM05D005752 ORTHO05D006959 4.3e-16 88.2 45 86.7
Thhalv10019162m.g Eutrema salsugineum HOM05D005752 ORTHO05D006959 9.7e-16 87.0 87 60.9
MBI03_g11902_MAGBIO Magnolia biondii HOM05D005752 ORTHO05D006959 4.8e-15 84.7 41 92.7
SMO232G0035 Selaginella moellendorffii HOM05D005752 ORTHO05D006959 8.2e-15 84.0 110 50.9
MD06G1000100 Malus domestica HOM05D005752 ORTHO05D006959 2.4e-14 82.4 40 92.5
QL10p035764 Quercus lobata HOM05D005752 ORTHO05D006959 2.6e-13 79.0 40 87.5
QL12p037498 Quercus lobata HOM05D005752 ORTHO05D006959 2.6e-13 79.0 40 87.5
PGSC0003DMG400026968 Solanum tuberosum HOM05D005752 ORTHO05D006959 8.5e-12 73.9 105 48.6
Aa31LG4G3620 Aethionema arabicum HOM05D005752 ORTHO05D006959 3.2e-11 72.0 63 63.5
GSVIVG01024240001 Vitis vinifera HOM05D005752 ORTHO05D006959 4.2e-11 71.6 40 90.0
AL2G33130 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 5.5e-11 71.2 51 72.5
Medtr6g068990 Medicago truncatula HOM05D005752 ORTHO05D006959 2.1e-10 69.3 35 100.0
Ah.14g085830 Amaranthus hybridus HOM05D005752 ORTHO05D006959 2.7e-10 68.9 36 97.2
CBR_g54189 Chara braunii HOM05D005752 ORTHO05D006959 2.7e-10 68.9 87 49.4
QL10p031508 Quercus lobata HOM05D005752 ORTHO05D006959 2.7e-10 68.9 76 61.8
AagrBONN_evm.TU.Sc2ySwM_368.1654 Anthoceros agrestis HOM05D005752 ORTHO05D006959 3.6e-10 68.6 43 81.4
Sopen03g029760 Solanum pennellii HOM05D005752 ORTHO05D006959 7.9e-10 67.4 35 97.1
vmacro17785 Vaccinium macrocarpon HOM05D005752 ORTHO05D006959 1.4e-09 66.6 35 94.3
Eucgr.G00948 Eucalyptus grandis HOM05D005752 ORTHO05D006959 3.9e-09 65.1 36 91.7
Dinv04371 Davidia involucrata HOM05D005752 ORTHO05D006959 6.7e-09 64.3 37 89.2
Phvul.004G136400 Phaseolus vulgaris HOM05D005752 ORTHO05D006959 6.7e-09 64.3 37 89.2
Thecc.03G073300 Theobroma cacao HOM05D005752 ORTHO05D006959 6.7e-09 64.3 37 89.2
AL2G33120 Arabidopsis lyrata HOM05D005752 ORTHO05D006959 1.1e-08 63.5 32 100.0
CARHR066400 Cardamine hirsuta HOM05D005752 ORTHO05D006959 1.1e-08 63.5 32 100.0
C06p34060 Brassica napus HOM05D005752 ORTHO05D006959 2.5e-08 62.4 32 96.9
Mapoly0033s0045 Marchantia polymorpha HOM05D005752 ORTHO05D006959 3.3e-08 62.0 37 86.5
MSTRG.23218 Avicennia marina HOM05D005752 ORTHO05D006959 4.3e-08 61.6 36 88.9
SGA_v2.0_scaffold21G09651 Striga asiatica HOM05D005752 ORTHO05D006959 7.4e-08 60.8 40 72.5
Eucgr.J01173 Eucalyptus grandis HOM05D005752 ORTHO05D006959 9.7e-08 60.5 37 83.8
PGSC0003DMG400035697 Solanum tuberosum HOM05D005752 ORTHO05D006959 5.3e-06 54.7 31 87.1


User provided reference genes

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