Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_38524 Corchorus olitorius HOM05D003771 ORTHO05D004396 1.8e-125 452.6 226 100.0
COL.COLO4_37655 Corchorus olitorius HOM05D003771 ORTHO05D004396 4.5e-44 182.2 112 82.1
Duzib168G1435 Durio zibethinus HOM05D003771 ORTHO05D004396 2.2e-43 179.9 112 81.2
Gohir.D05G000400 Gossypium hirsutum HOM05D003771 ORTHO05D004396 2.2e-43 179.9 112 81.2
Gorai.009G000200 Gossypium raimondii HOM05D003771 ORTHO05D004396 2.2e-43 179.9 112 81.2
Potri.018G149400 Populus trichocarpa HOM05D003771 ORTHO05D004396 2.2e-43 179.9 112 81.2
RcHm_v2.0_Chr4g0384941 Rosa chinensis HOM05D003771 ORTHO05D004396 2.2e-43 179.9 142 68.3
CANSAT64G2070 Cannabis sativa HOM05D003771 ORTHO05D004396 3.8e-43 179.1 112 80.4
FvH4_4g00210 Fragaria vesca HOM05D003771 ORTHO05D004396 6.5e-43 178.3 142 67.6
FAN12G2055 Fragaria x ananassa HOM05D003771 ORTHO05D004396 6.5e-43 178.3 142 67.6
FAN22G1465 Fragaria x ananassa HOM05D003771 ORTHO05D004396 6.5e-43 178.3 142 67.6
Gohir.A05G000200 Gossypium hirsutum HOM05D003771 ORTHO05D004396 6.5e-43 178.3 112 80.4
Prupe.7G042600 Prunus persica HOM05D003771 ORTHO05D004396 6.5e-43 178.3 142 67.6
Thecc.09G205400 Theobroma cacao HOM05D003771 ORTHO05D004396 6.5e-43 178.3 112 80.4
AL3G44140 Arabidopsis lyrata HOM05D003771 ORTHO05D004396 1.1e-42 177.6 112 79.5
AT2G07360 Arabidopsis thaliana HOM05D003771 ORTHO05D004396 1.1e-42 177.6 112 79.5
Carub.0013s0005 Capsella rubella HOM05D003771 ORTHO05D004396 1.1e-42 177.6 112 79.5
CARHR104050 Cardamine hirsuta HOM05D003771 ORTHO05D004396 1.1e-42 177.6 112 79.5
MD04G1002300 Malus domestica HOM05D003771 ORTHO05D004396 1.1e-42 177.6 112 80.4
Sabra18G0126200 Salix brachista HOM05D003771 ORTHO05D004396 1.1e-42 177.6 112 80.4
SGA_v2.0_scaffold21G09599 Striga asiatica HOM05D003771 ORTHO05D004396 1.1e-42 177.6 112 78.6
BcaB01g04159 Brassica carinata HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
BcaC01g06134 Brassica carinata HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
A03p16060 Brassica napus HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
C03p18900 Brassica napus HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
BolC3t14282H Brassica oleracea HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
BraA03t10897Z Brassica rapa HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
CSS0004980 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
CSS0043776 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
CiPaw.15G162500 Carya illinoinensis HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
Dinv12623 Davidia involucrata HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
Eucgr.E04317 Eucalyptus grandis HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
Thhalv10012482m.g Eutrema salsugineum HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
MD15G1427900 Malus domestica HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
QL11p007303 Quercus lobata HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
THA.LOC104808936 Tarenaya hassleriana HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
TAR383G0820 Trochodendron aralioides HOM05D003771 ORTHO05D004396 1.4e-42 177.2 112 79.5
Actinidia02465 Actinidia chinensis HOM05D003771 ORTHO05D004396 1.9e-42 176.8 112 78.6
Ca_17443_v3 Cicer arietinum L. HOM05D003771 ORTHO05D004396 1.9e-42 176.8 110 80.9
DCAR_020453 Daucus carota HOM05D003771 ORTHO05D004396 1.9e-42 176.8 112 79.5
Lj4g0002190 Lotus japonicus HOM05D003771 ORTHO05D004396 1.9e-42 176.8 110 80.9
Psat7g020760 Pisum sativum HOM05D003771 ORTHO05D004396 1.9e-42 176.8 110 80.9
TPR.G25458 Trifolium pratense HOM05D003771 ORTHO05D004396 1.9e-42 176.8 110 80.9
VMungo0251G3699 Vigna mungo HOM05D003771 ORTHO05D004396 1.9e-42 176.8 110 80.0
Aqoxy3G02691 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 2.5e-42 176.4 112 79.5
Aqoxy3G04250 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 2.5e-42 176.4 112 79.5
BcaB08g35516 Brassica carinata HOM05D003771 ORTHO05D004396 2.5e-42 176.4 112 79.5
BcaC04g20648 Brassica carinata HOM05D003771 ORTHO05D004396 2.5e-42 176.4 112 79.5
A10p09550 Brassica napus HOM05D003771 ORTHO05D004396 2.5e-42 176.4 112 79.5
C09p41070 Brassica napus HOM05D003771 ORTHO05D004396 2.5e-42 176.4 112 79.5
GSVIVG01022289001 Vitis vinifera HOM05D003771 ORTHO05D004396 2.5e-42 176.4 112 78.6
RcHm_v2.0_Chr4g0384821 Rosa chinensis HOM05D003771 ORTHO05D004396 3.2e-42 176.0 127 73.2
Sp6g13880 Schrenkiella parvula HOM05D003771 ORTHO05D004396 3.2e-42 176.0 112 79.5
Haze_19080 Corylus avellana HOM05D003771 ORTHO05D004396 4.2e-42 175.6 112 78.6
Glyma.05G220300 Glycine max HOM05D003771 ORTHO05D004396 4.2e-42 175.6 110 80.0
Glyma.08G026700 Glycine max HOM05D003771 ORTHO05D004396 4.2e-42 175.6 110 80.0
Phvul.002G302000 Phaseolus vulgaris HOM05D003771 ORTHO05D004396 4.2e-42 175.6 110 80.0
CDE07G1201 Ceratophyllum demersum HOM05D003771 ORTHO05D004396 5.5e-42 175.3 142 66.9
Lj5A798G49 Lonicera japonica HOM05D003771 ORTHO05D004396 5.5e-42 175.3 112 78.6
SalBow5G2520 Salvia bowleyana HOM05D003771 ORTHO05D004396 5.5e-42 175.3 112 77.7
Aa31sc328G10 Aethionema arabicum HOM05D003771 ORTHO05D004396 7.2e-42 174.9 112 78.6
Nn1g00173 Nelumbo nucifera HOM05D003771 ORTHO05D004396 7.2e-42 174.9 112 78.6
Nn3g19428 Nelumbo nucifera HOM05D003771 ORTHO05D004396 7.2e-42 174.9 112 79.5
Sc06g0002410 Simmondsia chinensis HOM05D003771 ORTHO05D004396 7.2e-42 174.9 112 77.7
Manes.02G223900 Manihot esculenta HOM05D003771 ORTHO05D004396 9.4e-42 174.5 112 79.5
PSO063G0153 Papaver somniferum HOM05D003771 ORTHO05D004396 9.4e-42 174.5 112 77.7
SEGI_40037 Sequoiadendron giganteum HOM05D003771 ORTHO05D004396 9.4e-42 174.5 112 78.6
TWI34G0561 Tripterygium wilfordii HOM05D003771 ORTHO05D004396 9.4e-42 174.5 112 78.6
Cc06_g23760 Coffea canephora HOM05D003771 ORTHO05D004396 1.2e-41 174.1 112 78.6
Migut.L01925 Erythranthe guttata HOM05D003771 ORTHO05D004396 1.2e-41 174.1 112 76.8
Peaxi162Scf00322g01517 Petunia axillaris HOM05D003771 ORTHO05D004396 1.2e-41 174.1 112 78.6
Sopen05g020060 Solanum pennellii HOM05D003771 ORTHO05D004396 1.2e-41 174.1 112 78.6
HPP92_018040 Vanilla planifolia HOM05D003771 ORTHO05D004396 1.2e-41 174.1 112 79.5
ATR0626G390 Amborella trichopoda HOM05D003771 ORTHO05D004396 1.6e-41 173.7 142 66.2
arahy.Tifrunner.gnm1.ann1.TH49EC Arachis hypogaea HOM05D003771 ORTHO05D004396 1.6e-41 173.7 121 72.7
arahy.Tifrunner.gnm1.ann1.XKPK2Z Arachis hypogaea HOM05D003771 ORTHO05D004396 1.6e-41 173.7 121 72.7
Cpa.g.sc91.64 Carica papaya HOM05D003771 ORTHO05D004396 1.6e-41 173.7 112 77.7
EL10Ac4g08749 Beta vulgaris HOM05D003771 ORTHO05D004396 2.1e-41 173.3 112 77.7
AUR62034148 Chenopodium quinoa HOM05D003771 ORTHO05D004396 2.1e-41 173.3 112 77.7
Ciclev10007279m.g Citrus clementina HOM05D003771 ORTHO05D004396 2.1e-41 173.3 112 78.6
Medtr8g100105 Medicago truncatula HOM05D003771 ORTHO05D004396 2.1e-41 173.3 110 79.1
Atru.chr12.1314 Acer truncatum HOM05D003771 ORTHO05D004396 2.7e-41 172.9 112 77.7
Ah.04g162600 Amaranthus hybridus HOM05D003771 ORTHO05D004396 2.7e-41 172.9 112 76.8
FAN17G2138 Fragaria x ananassa HOM05D003771 ORTHO05D004396 2.7e-41 172.9 142 66.2
Lju50C19G3 Lonicera japonica HOM05D003771 ORTHO05D004396 2.7e-41 172.9 112 75.9
Nitab4.5_0000019g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 2.7e-41 172.9 112 77.7
Os03g0265700 Oryza sativa ssp. japonica HOM05D003771 ORTHO05D004396 2.7e-41 172.9 112 77.7
HanXRQChr02g0040541 Helianthus annuus HOM05D003771 ORTHO05D004396 3.6e-41 172.6 112 77.7
Oeu008632.1 Olea europaea HOM05D003771 ORTHO05D004396 3.6e-41 172.6 112 77.7
PGR044G2258 Punica granatum HOM05D003771 ORTHO05D004396 3.6e-41 172.6 112 75.9
Zm00001eb011800 Zea mays HOM05D003771 ORTHO05D004396 3.6e-41 172.6 112 77.7
unitig_899.g15422 Utricularia gibba HOM05D003771 ORTHO05D004396 4.6e-41 172.2 112 75.9
Nitab4.5_0006114g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 6.1e-41 171.8 112 76.8
AUR62014286 Chenopodium quinoa HOM05D003771 ORTHO05D004396 7.9e-41 171.4 111 78.4
PSO782G3876 Papaver somniferum HOM05D003771 ORTHO05D004396 7.9e-41 171.4 112 76.8
Lalb_Chr05g0223831 Lupinus albus HOM05D003771 ORTHO05D004396 1.4e-40 170.6 110 78.2
Rhsim01G0106700 Rhododendron simsii HOM05D003771 ORTHO05D004396 1.4e-40 170.6 112 78.6
vmacro20748 Vaccinium macrocarpon HOM05D003771 ORTHO05D004396 1.4e-40 170.6 112 78.6
CAN.G587.52 Capsicum annuum HOM05D003771 ORTHO05D004396 1.8e-40 170.2 112 75.9
Hund03218 Selenicereus undatus HOM05D003771 ORTHO05D004396 2.3e-40 169.9 112 75.0
ECA233G1083 Erigeron canadensis HOM05D003771 ORTHO05D004396 3.9e-40 169.1 112 75.9
Lsat_1_v5_gn_1_6680 Lactuca sativa HOM05D003771 ORTHO05D004396 6.7e-40 168.3 112 75.9
MSTRG.26513 Avicennia marina HOM05D003771 ORTHO05D004396 8.8e-40 167.9 112 75.0
CsaV3_4G031470 Cucumis sativus L. HOM05D003771 ORTHO05D004396 8.8e-40 167.9 112 75.0
MELO3C009070.2 Cucumis melo HOM05D003771 ORTHO05D004396 1.5e-39 167.2 112 75.0
Lsat_1_v5_gn_8_69981 Lactuca sativa HOM05D003771 ORTHO05D004396 2.0e-39 166.8 126 68.3
ClCG04G000570 Citrullus lanatus HOM05D003771 ORTHO05D004396 5.7e-39 165.2 112 74.1
Sed0018603 Sechium edule HOM05D003771 ORTHO05D004396 5.7e-39 165.2 112 74.1
HanXRQChr05g0138111 Helianthus annuus HOM05D003771 ORTHO05D004396 2.8e-38 162.9 112 72.3
Hund19352 Selenicereus undatus HOM05D003771 ORTHO05D004396 3.7e-38 162.5 112 74.1
Mapoly0015s0202 Marchantia polymorpha HOM05D003771 ORTHO05D004396 1.1e-34 151.0 112 68.8
SMO367G0435 Selaginella moellendorffii HOM05D003771 ORTHO05D004396 1.1e-34 151.0 112 68.8
Pp3c15_18470 Physcomitrium patens HOM05D003771 ORTHO05D004396 1.1e-31 141.0 109 64.2
AagrBONN_evm.TU.Sc2ySwM_228.2998 Anthoceros agrestis HOM05D003771 ORTHO05D004396 3.3e-31 139.4 142 54.9
AagrBONN_evm.TU.Sc2ySwM_228.3008 Anthoceros agrestis HOM05D003771 ORTHO05D004396 3.3e-31 139.4 142 54.9
AagrBONN_evm.TU.Sc2ySwM_369.331 Anthoceros agrestis HOM05D003771 ORTHO05D004396 3.3e-31 139.4 142 54.9
Zm00001eb307240 Zea mays HOM05D003771 ORTHO05D004396 3.2e-26 122.9 64 89.1
Zm00001eb154330 Zea mays HOM05D003771 ORTHO05D004396 1.6e-25 120.6 64 87.5
Psat0s1568g0040 Pisum sativum HOM05D003771 ORTHO05D004396 1.0e-24 117.9 90 66.7
Lsat_1_v5_gn_5_155680 Lactuca sativa HOM05D003771 ORTHO05D004396 1.6e-20 104.0 101 56.4
Psat0ss6263g0280 Pisum sativum HOM05D041104 ORTHO05D004396 4.8e-14 82.4 75 56.0
Psat3g071280 Pisum sativum HOM05D000062 ORTHO05D004396 7.0e-13 78.6 44 84.1
Psat5g077000 Pisum sativum HOM05D000062 ORTHO05D004396 2.7e-12 76.6 75 54.7
MD07G1055300 Malus domestica HOM05D003771 ORTHO05D004396 3.2e-10 69.7 36 88.9
CBR_g10825 Chara braunii HOM05D000019 ORTHO05D000048 7.2e-10 68.6 68 51.5


User provided reference genes

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