Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_38410 Corchorus olitorius HOM05D008750 ORTHO05D010839 4.3e-76 288.1 166 100.0
Thecc.09G167900 Theobroma cacao HOM05D008750 ORTHO05D010839 4.6e-30 135.2 110 67.3
Duzib168G0353 Durio zibethinus HOM05D008750 ORTHO05D010839 3.9e-29 132.1 124 60.5
Manes.06G024500 Manihot esculenta HOM05D008750 ORTHO05D010839 1.0e-21 107.5 86 67.4
COL.COLO4_38413 Corchorus olitorius HOM05D008750 ORTHO05D010839 7.4e-20 101.3 102 54.9
Manes.06G024650 Manihot esculenta HOM05D008750 ORTHO05D010839 7.4e-20 101.3 90 61.1
MELO3C004079.2 Cucumis melo HOM05D008750 ORTHO05D010839 1.5e-17 93.6 98 52.0
Eucgr.C02392 Eucalyptus grandis HOM05D008750 ORTHO05D010839 1.2e-14 84.0 107 43.9
Rhsim01G0007300 Rhododendron simsii HOM05D008750 ORTHO05D010839 1.6e-14 83.6 98 45.9
Rhsim03G0263300 Rhododendron simsii HOM05D008750 ORTHO05D010839 2.7e-14 82.8 109 48.6
Dinv42750 Davidia involucrata HOM05D008750 ORTHO05D010839 4.6e-14 82.0 115 43.5
Dinv43352 Davidia involucrata HOM05D008750 ORTHO05D010839 4.6e-14 82.0 115 43.5
CsaV3_2G008040 Cucumis sativus L. HOM05D008750 ORTHO05D010839 7.9e-14 81.3 89 49.4
CSS0033938 Camellia sinensis var. sinensis HOM05D008750 ORTHO05D010839 2.0e-12 76.6 127 40.2
Sed0019741 Sechium edule HOM05D008750 ORTHO05D010839 3.3e-12 75.9 108 44.4
EL10Ac3g05536 Beta vulgaris HOM05D008750 ORTHO05D010839 9.7e-12 74.3 96 44.8
Lj7C470T7 Lonicera japonica HOM05D008750 ORTHO05D010839 4.8e-11 72.0 115 44.3
AUR62041658 Chenopodium quinoa HOM05D008750 ORTHO05D010839 8.2e-11 71.2 109 43.1
Rhsim03G0263400 Rhododendron simsii HOM05D008750 ORTHO05D010839 8.2e-11 71.2 95 46.3
Sed0004116 Sechium edule HOM05D008750 ORTHO05D010839 2.4e-10 69.7 99 42.4
AUR62016235 Chenopodium quinoa HOM05D008750 ORTHO05D010839 1.5e-09 67.0 94 41.5
DCAR_017964 Daucus carota HOM05D008750 ORTHO05D010839 1.5e-09 67.0 100 44.0
DCAR_017962 Daucus carota HOM05D008750 ORTHO05D010839 2.0e-09 66.6 98 43.9
Lj7C470T6 Lonicera japonica HOM05D008750 ORTHO05D010839 2.0e-09 66.6 141 36.9
DCAR_017961 Daucus carota HOM05D008750 ORTHO05D010839 5.9e-09 65.1 107 43.0
COL.COLO4_38414 Corchorus olitorius HOM05D008750 ORTHO05D010839 7.7e-09 64.7 55 61.8
DCAR_017963 Daucus carota HOM05D008750 ORTHO05D010839 1.0e-08 64.3 98 43.9
Lj2C67T7 Lonicera japonica HOM05D008750 ORTHO05D010839 1.0e-08 64.3 115 35.7
Lj1C678T11 Lonicera japonica HOM05D000487 ORTHO05D000405 1.7e-08 63.5 129 36.4
ECA236G4277 Erigeron canadensis HOM05D008750 ORTHO05D010839 2.2e-08 63.2 96 42.7
Lsat_1_v5_gn_8_66061 Lactuca sativa HOM05D008750 ORTHO05D010839 8.5e-08 61.2 112 39.3
ECA236G3374 Erigeron canadensis HOM05D008750 ORTHO05D010839 2.5e-07 59.7 98 37.8
Nn4g24057 Nelumbo nucifera HOM05D041019 ORTHO05D010839 5.5e-07 58.5 84 45.2
Lsat_1_v5_gn_8_65921 Lactuca sativa HOM05D008750 ORTHO05D010839 9.4e-07 57.8 110 35.5
Lsat_1_v5_gn_8_66041 Lactuca sativa HOM05D008750 ORTHO05D010839 1.6e-06 57.0 112 35.7
ECA236G4119 Erigeron canadensis HOM05D008750 ORTHO05D010839 2.1e-06 56.6 96 39.6
DCAR_017960 Daucus carota HOM05D008750 ORTHO05D010839 7.9e-06 54.7 104 38.5


User provided reference genes

Program Settings