Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37904 Corchorus olitorius HOM05D001243 ORTHO05D000843 2.6e-132 475.3 229 100.0
COL.COLO4_03452 Corchorus olitorius HOM05D001243 ORTHO05D000843 5.8e-23 112.1 225 38.2
Thecc.10G177800 Theobroma cacao HOM05D000051 ORTHO05D000843 2.2e-22 110.2 211 38.4
Thecc.10G178300 Theobroma cacao HOM05D000051 ORTHO05D000843 2.2e-22 110.2 213 39.4
Thecc.10G178600 Theobroma cacao HOM05D000051 ORTHO05D000843 6.4e-22 108.6 213 39.4
COL.COLO4_10029 Corchorus olitorius HOM05D001243 ORTHO05D000843 2.4e-21 106.7 218 38.5
COL.COLO4_19453 Corchorus olitorius HOM05D000051 ORTHO05D000843 1.2e-20 104.4 232 34.1
Thecc.10G177600 Theobroma cacao HOM05D000051 ORTHO05D000843 1.2e-20 104.4 215 39.5
Thecc.10G177900 Theobroma cacao HOM05D000051 ORTHO05D000843 6.0e-20 102.1 214 39.7
Thecc.10G178800 Theobroma cacao HOM05D000051 ORTHO05D000843 6.0e-20 102.1 213 39.0
Thecc.10G178200 Theobroma cacao HOM05D000051 ORTHO05D000843 2.3e-19 100.1 212 38.7
Thecc.10G178500 Theobroma cacao HOM05D000051 ORTHO05D000843 2.3e-19 100.1 212 38.7
COL.COLO4_38578 Corchorus olitorius HOM05D000051 ORTHO05D000843 3.9e-19 99.4 217 35.9
Thecc.10G177700 Theobroma cacao HOM05D000051 ORTHO05D000843 1.5e-18 97.4 210 37.1
Thecc.10G178400 Theobroma cacao HOM05D001243 ORTHO05D000843 1.5e-18 97.4 212 36.8
COL.COLO4_28499 Corchorus olitorius HOM05D000051 ORTHO05D000843 5.6e-18 95.5 224 33.5
Thecc.10G178700 Theobroma cacao HOM05D001243 ORTHO05D000843 1.6e-17 94.0 158 45.6
Potri.011G104200 Populus trichocarpa HOM05D000051 ORTHO05D000843 4.0e-16 89.4 234 33.3
Potri.011G104300 Populus trichocarpa HOM05D000051 ORTHO05D000843 2.6e-15 86.7 232 32.8
COL.COLO4_38582 Corchorus olitorius HOM05D001243 ORTHO05D000843 3.4e-15 86.3 233 30.9
Potri.011G104100 Populus trichocarpa HOM05D000051 ORTHO05D000843 2.9e-14 83.2 232 33.6
COL.COLO4_03453 Corchorus olitorius HOM05D000051 ORTHO05D000843 6.4e-14 82.0 152 39.5
COL.COLO4_19426 Corchorus olitorius HOM05D001243 ORTHO05D000843 6.4e-14 82.0 226 29.6
COL.COLO4_38583 Corchorus olitorius HOM05D000051 ORTHO05D000843 6.4e-14 82.0 218 33.0
COL.COLO4_20851 Corchorus olitorius HOM05D000051 ORTHO05D000843 9.3e-13 78.2 258 30.2
COL.COLO4_19432 Corchorus olitorius HOM05D000003 ORTHO05D000843 2.7e-12 76.6 250 30.0
Dinv10494 Davidia involucrata HOM05D001243 ORTHO05D000843 3.5e-12 76.3 219 29.7
COL.COLO4_38579 Corchorus olitorius HOM05D001243 ORTHO05D000843 1.0e-11 74.7 222 29.7
Thecc.10G176300 Theobroma cacao HOM05D000051 ORTHO05D000843 1.3e-11 74.3 152 36.8
CSS0011033 Camellia sinensis var. sinensis HOM05D001243 ORTHO05D000843 4.3e-10 69.3 231 29.9
COL.COLO4_29031 Corchorus olitorius HOM05D000051 ORTHO05D013057 2.1e-09 67.0 220 31.4
Dinv09867 Davidia involucrata HOM05D001243 ORTHO05D000843 8.1e-09 65.1 165 31.5
Duzib213G0200 Durio zibethinus HOM05D000051 ORTHO05D000015 1.8e-08 63.9 216 27.3
Dinv03144 Davidia involucrata HOM05D000051 ORTHO05D000843 5.3e-08 62.4 238 29.4
COL.COLO4_32850 Corchorus olitorius HOM05D000051 ORTHO05D000843 1.2e-07 61.2 152 32.9
A07p24400 Brassica napus HOM05D000689 ORTHO05D000015 1.5e-07 60.8 161 31.1
Actinidia03267 Actinidia chinensis HOM05D001243 ORTHO05D000843 2.6e-07 60.1 217 29.0
PSO384G4270 Papaver somniferum HOM05D000051 ORTHO05D000015 7.6e-07 58.5 172 31.4
PSO675G8840 Papaver somniferum HOM05D000051 ORTHO05D000015 1.3e-06 57.8 168 32.1
Thecc.07G045800 Theobroma cacao HOM05D000051 ORTHO05D000015 1.7e-06 57.4 166 29.5
HanXRQChr16g0521231 Helianthus annuus HOM05D001243 ORTHO05D000843 2.9e-06 56.6 156 30.1
Sopen07g032410 Solanum pennellii HOM05D000051 ORTHO05D000015 2.9e-06 56.6 185 28.6
Medtr1g077420 Medicago truncatula HOM05D001243 ORTHO05D000843 3.8e-06 56.2 140 32.1
Sp5g07520 Schrenkiella parvula HOM05D000051 ORTHO05D000015 3.8e-06 56.2 160 28.8
Ca_09920_v3 Cicer arietinum L. HOM05D001243 ORTHO05D000843 6.4e-06 55.5 140 32.9


User provided reference genes

Program Settings