Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37700 Corchorus olitorius HOM05D007223 ORTHO05D008932 1.2e-81 306.6 172 100.0
Thecc.09G177700 Theobroma cacao HOM05D007223 ORTHO05D008932 1.1e-53 213.8 174 70.7
Duzib168G2276 Durio zibethinus HOM05D007223 ORTHO05D008932 4.2e-50 201.8 174 70.1
Duzib170G0975 Durio zibethinus HOM05D007223 ORTHO05D008932 5.4e-50 201.4 178 68.5
Gohir.A08G084300 Gossypium hirsutum HOM05D007223 ORTHO05D008932 1.1e-45 187.2 173 65.3
Gorai.004G099600 Gossypium raimondii HOM05D007223 ORTHO05D008932 9.0e-45 184.1 173 64.2
Gohir.D08G093900 Gossypium hirsutum HOM05D007223 ORTHO05D008932 5.8e-44 181.4 173 63.6
Dinv41246 Davidia involucrata HOM05D007223 ORTHO05D008932 8.4e-43 177.6 186 57.5
CSS0040203 Camellia sinensis var. sinensis HOM05D007223 ORTHO05D008932 5.5e-42 174.9 171 60.8
Dinv42721 Davidia involucrata HOM05D007223 ORTHO05D008932 1.0e-40 170.6 180 58.9
Dinv43380 Davidia involucrata HOM05D007223 ORTHO05D008932 1.0e-40 170.6 180 58.9
Prupe.1G085900 Prunus persica HOM05D007223 ORTHO05D008932 1.0e-40 170.6 171 58.5
Ciclev10010470m.g Citrus clementina HOM05D007223 ORTHO05D008932 3.0e-40 169.1 109 79.8
MD13G1253600 Malus domestica HOM05D007223 ORTHO05D008932 3.0e-40 169.1 172 57.6
FAN12G3200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 7.4e-39 164.5 174 55.2
QL02p097776 Quercus lobata HOM05D007223 ORTHO05D008932 7.4e-39 164.5 175 59.4
TAR383G1061 Trochodendron aralioides HOM05D007223 ORTHO05D008932 1.6e-38 163.3 171 56.7
FvH4_4g08200 Fragaria vesca HOM05D007223 ORTHO05D008932 3.7e-38 162.2 174 54.6
Atru.chr7.623 Acer truncatum HOM05D007223 ORTHO05D008932 6.2e-38 161.4 176 57.4
RcHm_v2.0_Chr4g0402441 Rosa chinensis HOM05D007223 ORTHO05D008932 8.2e-38 161.0 175 55.4
Haze_22095 Corylus avellana HOM05D007223 ORTHO05D008932 1.4e-37 160.2 172 57.0
Manes.14G153900 Manihot esculenta HOM05D007223 ORTHO05D008932 1.8e-37 159.8 175 57.1
Cfa013503 Carpinus fangiana HOM05D007223 ORTHO05D008932 2.4e-37 159.5 172 57.0
Phvul.003G145600 Phaseolus vulgaris HOM05D007223 ORTHO05D008932 2.4e-37 159.5 171 55.0
CiPaw.08G036200 Carya illinoinensis HOM05D007223 ORTHO05D008932 3.1e-37 159.1 171 55.6
FAN17G0481 Fragaria x ananassa HOM05D007223 ORTHO05D008932 3.1e-37 159.1 173 54.3
Lalb_Chr07g0180471 Lupinus albus HOM05D007223 ORTHO05D008932 4.0e-37 158.7 171 54.4
Oeu004200.1 Olea europaea HOM05D007223 ORTHO05D008932 5.3e-37 158.3 173 54.3
BcaB08g36098 Brassica carinata HOM05D007223 ORTHO05D008932 1.2e-36 157.1 117 70.1
AT5G57420 Arabidopsis thaliana HOM05D007223 ORTHO05D008932 1.5e-36 156.8 174 54.6
Oeu042168.1 Olea europaea HOM05D007223 ORTHO05D008932 1.5e-36 156.8 171 55.6
Sabra06G0129600 Salix brachista HOM05D007223 ORTHO05D008932 1.5e-36 156.8 178 52.8
FAN07G1685 Fragaria x ananassa HOM05D007223 ORTHO05D008932 2.0e-36 156.4 173 53.8
FAN22G1200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 3.4e-36 155.6 173 53.8
Sp6g19140 Schrenkiella parvula HOM05D007223 ORTHO05D008932 3.4e-36 155.6 177 54.2
Cc06_g13230 Coffea canephora HOM05D007223 ORTHO05D008932 5.8e-36 154.8 180 51.7
Thhalv10015874m.g Eutrema salsugineum HOM05D007223 ORTHO05D008932 5.8e-36 154.8 178 54.5
AL8G33400 Arabidopsis lyrata HOM05D007223 ORTHO05D008932 1.0e-35 154.1 178 54.5
Cpa.g.sc233.11 Carica papaya HOM05D007223 ORTHO05D008932 1.0e-35 154.1 174 54.0
Carub.0008s1794 Capsella rubella HOM05D007223 ORTHO05D008932 2.2e-35 152.9 179 54.7
GSVIVG01029215001 Vitis vinifera HOM05D007223 ORTHO05D008932 2.2e-35 152.9 103 74.8
BcaC04g19969 Brassica carinata HOM05D007223 ORTHO05D008932 3.8e-35 152.1 110 71.8
TAR625G0650 Trochodendron aralioides HOM05D007223 ORTHO05D008932 4.9e-35 151.8 178 52.8
Nn8g40486 Nelumbo nucifera HOM05D007223 ORTHO05D008932 6.5e-35 151.4 111 69.4
A10p14870 Brassica napus HOM05D007223 ORTHO05D008932 8.4e-35 151.0 116 68.1
BraA10t43566Z Brassica rapa HOM05D007223 ORTHO05D008932 8.4e-35 151.0 116 68.1
CARHR271220 Cardamine hirsuta HOM05D007223 ORTHO05D008932 1.4e-34 150.2 173 54.3
Eucgr.C02329 Eucalyptus grandis HOM05D007223 ORTHO05D008932 1.4e-34 150.2 174 55.2
C09p49290 Brassica napus HOM05D007223 ORTHO05D008932 1.9e-34 149.8 109 71.6
BolC9t57780H Brassica oleracea HOM05D007223 ORTHO05D008932 1.9e-34 149.8 109 71.6
Potri.006G166900 Populus trichocarpa HOM05D007223 ORTHO05D008932 2.5e-34 149.4 108 71.3
BraA02t05920Z Brassica rapa HOM05D007223 ORTHO05D008932 5.5e-34 148.3 173 50.9
A02p08480 Brassica napus HOM05D007223 ORTHO05D008932 7.1e-34 147.9 173 50.9
BcaC03g14153 Brassica carinata HOM05D007223 ORTHO05D008932 9.3e-34 147.5 118 66.1
C02p14240 Brassica napus HOM05D007223 ORTHO05D008932 1.2e-33 147.1 173 49.7
MSTRG.6217 Avicennia marina HOM05D007223 ORTHO05D008932 1.6e-33 146.7 176 50.6
BolC2t07548H Brassica oleracea HOM05D007223 ORTHO05D008932 2.1e-33 146.4 173 49.7
Medtr4g128070 Medicago truncatula HOM05D007223 ORTHO05D008932 2.7e-33 146.0 114 68.4
VMungo1215G0104 Vigna mungo HOM05D007223 ORTHO05D008932 3.5e-33 145.6 172 51.2
Lj4g0003272 Lotus japonicus HOM05D007223 ORTHO05D008932 2.3e-32 142.9 172 53.5
Aa31LG3G13310 Aethionema arabicum HOM05D007223 ORTHO05D008932 3.9e-32 142.1 172 50.6
Actinidia04146 Actinidia chinensis HOM05D007223 ORTHO05D008932 5.1e-32 141.7 172 50.6
MSTRG.19707 Avicennia marina HOM05D007223 ORTHO05D008932 5.1e-32 141.7 174 50.6
Peaxi162Scf00231g00621 Petunia axillaris HOM05D007223 ORTHO05D008932 5.1e-32 141.7 174 51.1
THA.LOC104817792 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 5.1e-32 141.7 115 67.8
arahy.Tifrunner.gnm1.ann1.LBMC6N Arachis hypogaea HOM05D007223 ORTHO05D008932 6.7e-32 141.4 183 50.8
BcaB05g22346 Brassica carinata HOM05D007223 ORTHO05D008932 6.7e-32 141.4 113 65.5
Potri.018G092300 Populus trichocarpa HOM05D007223 ORTHO05D008932 1.1e-31 140.6 179 50.3
vmacro13125 Vaccinium macrocarpon HOM05D007223 ORTHO05D008932 1.1e-31 140.6 102 74.5
Rhsim01G0004500 Rhododendron simsii HOM05D007223 ORTHO05D008932 2.5e-31 139.4 104 71.2
arahy.Tifrunner.gnm1.ann1.1E3WXN Arachis hypogaea HOM05D007223 ORTHO05D008932 3.3e-31 139.0 190 48.9
MBI14_g17369_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 3.3e-31 139.0 96 74.0
THA.LOC104813522 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 3.3e-31 139.0 102 73.5
Hma1.2p1_1025F.1_g249310 Hydrangea macrophylla HOM05D007223 ORTHO05D008932 5.7e-31 138.3 176 48.3
Ca_21226_v3 Cicer arietinum L. HOM05D007223 ORTHO05D008932 9.7e-31 137.5 113 65.5
CANSAT11G1503 Cannabis sativa HOM05D007223 ORTHO05D008932 1.4e-29 133.7 114 66.7
Psat4g012360 Pisum sativum HOM05D007223 ORTHO05D008932 1.4e-29 133.7 98 70.4
PGR102G0813 Punica granatum HOM05D007223 ORTHO05D008932 3.1e-29 132.5 185 57.3
Lalb_Chr13g0300221 Lupinus albus HOM05D007223 ORTHO05D008932 4.1e-29 132.1 171 52.6
MBI16_g39833_MAGBIO Magnolia biondii HOM05D007223 ORTHO05D008932 9.0e-29 131.0 91 72.5
SalBow6G4081 Salvia bowleyana HOM05D007223 ORTHO05D008932 9.0e-29 131.0 89 71.9
TPR.G5371 Trifolium pratense HOM05D007223 ORTHO05D008932 5.9e-28 128.3 89 74.2
HanXRQChr10g0308641 Helianthus annuus HOM05D007223 ORTHO05D008932 1.3e-27 127.1 114 57.9
ClCG11G012160 Citrullus lanatus HOM05D007223 ORTHO05D008932 1.7e-27 126.7 85 71.8
MELO3C004026.2 Cucumis melo HOM05D007223 ORTHO05D008932 2.9e-27 125.9 94 66.0
Sed0023808 Sechium edule HOM05D007223 ORTHO05D008932 2.9e-27 125.9 84 71.4
SGA_v2.0_scaffold69G23253 Striga asiatica HOM05D007223 ORTHO05D008932 2.9e-27 125.9 110 61.8
CsaV3_2G008380 Cucumis sativus L. HOM05D007223 ORTHO05D008932 6.5e-27 124.8 93 64.5
DCAR_014699 Daucus carota HOM05D007223 ORTHO05D008932 6.5e-27 124.8 100 67.0
Lj5C590T0 Lonicera japonica HOM05D007223 ORTHO05D008932 1.1e-26 124.0 177 49.7
Lj5C7T1 Lonicera japonica HOM05D007223 ORTHO05D008932 1.1e-26 124.0 176 49.4
EL10Ac8g18282 Beta vulgaris HOM05D007223 ORTHO05D008932 5.5e-26 121.7 93 65.6
ATR0580G272 Amborella trichopoda HOM05D007223 ORTHO05D008932 2.1e-25 119.8 124 51.6
Os04g0653300 Oryza sativa ssp. japonica HOM05D007223 ORTHO05D008932 2.7e-25 119.4 99 62.6
PSO782G5105 Papaver somniferum HOM05D007223 ORTHO05D008932 2.7e-25 119.4 129 53.5
PGSC0003DMG400043142 Solanum tuberosum HOM05D007223 ORTHO05D008932 2.7e-25 119.4 82 70.7
Migut.J01482 Erythranthe guttata HOM05D007223 ORTHO05D008932 6.1e-25 118.2 174 46.6
Lsat_1_v5_gn_5_85421 Lactuca sativa HOM05D007223 ORTHO05D008932 1.0e-24 117.5 120 55.0
Solyc07g019450.3 Solanum lycopersicum HOM05D007223 ORTHO05D008932 6.7e-24 114.8 83 66.3
AUR62033216 Chenopodium quinoa HOM05D007223 ORTHO05D008932 3.3e-23 112.5 94 63.8
SEGI_39293 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 1.7e-22 110.2 85 63.5
ECA234G1236 Erigeron canadensis HOM05D007223 ORTHO05D008932 3.1e-21 105.9 86 61.6
Zm00001eb432400 Zea mays HOM05D007223 ORTHO05D008932 3.2e-18 95.9 100 49.0
HPP92_017414 Vanilla planifolia HOM05D007223 ORTHO05D008932 1.2e-17 94.0 81 60.5
Nitab4.5_0001972g0010 Nicotiana tabacum HOM05D007223 ORTHO05D008932 2.2e-14 83.2 61 65.6
Glyma.20G083900 Glycine max HOM05D007223 ORTHO05D008932 6.3e-14 81.6 103 51.5
SEGI_19995 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 3.1e-13 79.3 96 46.9
Mapoly0013s0010 Marchantia polymorpha HOM05D007223 ORTHO05D008932 3.8e-11 72.4 79 43.0
SMO170G0055 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 1.1e-10 70.9 73 52.1
SMO141G0094 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 1.9e-10 70.1 73 52.1
Aqoxy7G03081 Aquilegia oxysepala HOM05D007223 ORTHO05D008932 7.2e-10 68.2 47 68.1
CBR_g19697 Chara braunii HOM05D000117 ORTHO05D008932 6.1e-09 65.1 91 36.3
AagrBONN_evm.TU.Sc2ySwM_117.1187 Anthoceros agrestis HOM05D007223 ORTHO05D008932 2.3e-08 63.2 78 43.6
Aa31LG2G21740 Aethionema arabicum HOM05D000117 ORTHO05D000070 3.3e-07 59.3 119 32.8
CBR_g39692 Chara braunii HOM05D000117 ORTHO05D000070 3.3e-07 59.3 85 40.0
Ciclev10005544m.g Citrus clementina HOM05D000117 ORTHO05D000070 4.8e-06 55.5 83 32.5
A05p12230 Brassica napus HOM05D000117 ORTHO05D000070 8.2e-06 54.7 81 34.6


User provided reference genes

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