Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37416 Corchorus olitorius HOM05D003142 ORTHO05D003600 6.6e-27 123.2 60 100.0
COL.COLO4_30808 Corchorus olitorius HOM05D003142 ORTHO05D003600 3.1e-08 61.2 29 96.6
Haze_16069 Corylus avellana HOM05D000945 ORTHO05D003600 3.1e-08 61.2 29 96.6
Dinv20407 Davidia involucrata HOM05D003142 ORTHO05D003600 3.1e-08 61.2 29 96.6
Phvul.010G125800 Phaseolus vulgaris HOM05D003142 ORTHO05D003600 3.1e-08 61.2 29 96.6
Thecc.06G125300 Theobroma cacao HOM05D003142 ORTHO05D003600 3.1e-08 61.2 29 96.6
GSVIVG01016711001 Vitis vinifera HOM05D003142 ORTHO05D003600 3.1e-08 61.2 29 89.7
Actinidia21804 Actinidia chinensis HOM05D003142 ORTHO05D003600 6.8e-08 60.1 29 93.1
MSTRG.10930 Avicennia marina HOM05D003142 ORTHO05D003600 8.9e-08 59.7 29 89.7
Cfa003505 Carpinus fangiana HOM05D000945 ORTHO05D003600 8.9e-08 59.7 29 93.1
Rhsim08G0241500 Rhododendron simsii HOM05D003142 ORTHO05D003600 8.9e-08 59.7 29 93.1
vmacro15060 Vaccinium macrocarpon HOM05D003142 ORTHO05D003600 8.9e-08 59.7 29 93.1
Cc04_g01010 Coffea canephora HOM05D003142 ORTHO05D003600 1.2e-07 59.3 35 80.0
Ca_04807_v3 Cicer arietinum L. HOM05D003142 ORTHO05D003600 1.5e-07 58.9 29 93.1
Glyma.16G010500 Glycine max HOM05D003142 ORTHO05D003600 1.5e-07 58.9 29 93.1
HanXRQChr15g0497171 Helianthus annuus HOM05D003142 ORTHO05D003600 1.5e-07 58.9 29 93.1
Manes.11G016000 Manihot esculenta HOM05D003142 ORTHO05D003600 1.5e-07 58.9 29 89.7
QL05p003308 Quercus lobata HOM05D003142 ORTHO05D003600 1.5e-07 58.9 29 93.1
Aqoxy7G00984 Aquilegia oxysepala HOM05D003142 ORTHO05D003600 2.0e-07 58.5 29 86.2
Gohir.A10G056300 Gossypium hirsutum HOM05D003142 ORTHO05D003600 2.6e-07 58.2 29 89.7
Nitab4.5_0003137g0050 Nicotiana tabacum HOM05D003142 ORTHO05D003600 2.6e-07 58.2 29 89.7
Nitab4.5_0027818g0010 Nicotiana tabacum HOM05D003142 ORTHO05D003600 2.6e-07 58.2 29 89.7
Psat4g166960 Pisum sativum HOM05D003142 ORTHO05D003600 2.6e-07 58.2 29 89.7
Solyc06g063020.4 Solanum lycopersicum HOM05D003142 ORTHO05D003600 2.6e-07 58.2 29 89.7
Sopen06g022470 Solanum pennellii HOM05D003142 ORTHO05D003600 2.6e-07 58.2 29 89.7
PGSC0003DMG401004894 Solanum tuberosum HOM05D003142 ORTHO05D003600 2.6e-07 58.2 29 89.7
TAR624G0191 Trochodendron aralioides HOM05D003142 ORTHO05D003600 2.6e-07 58.2 29 89.7
VMungo0331G1342 Vigna mungo HOM05D003142 ORTHO05D003600 2.6e-07 58.2 30 90.0
CANSAT56G4392 Cannabis sativa HOM05D003142 ORTHO05D003600 3.4e-07 57.8 29 86.2
Eucgr.F02474 Eucalyptus grandis HOM05D003142 ORTHO05D003600 3.4e-07 57.8 29 89.7
Oeu005588.1 Olea europaea HOM05D003142 ORTHO05D003600 3.4e-07 57.8 29 86.2
Peaxi162Scf00207g01552 Petunia axillaris HOM05D003142 ORTHO05D003600 3.4e-07 57.8 29 86.2
CSS0002964 Camellia sinensis var. sinensis HOM05D003142 ORTHO05D003600 4.4e-07 57.4 29 89.7
CSS0037213 Camellia sinensis var. sinensis HOM05D003142 ORTHO05D003600 4.4e-07 57.4 29 89.7
Atru.chr1.4091 Acer truncatum HOM05D003142 ORTHO05D003600 5.8e-07 57.0 29 89.7
Duzib235G1234 Durio zibethinus HOM05D003142 ORTHO05D003600 5.8e-07 57.0 28 89.3
Lalb_Chr03g0041291 Lupinus albus HOM05D003142 ORTHO05D003600 5.8e-07 57.0 29 86.2
CAN.G1743.6 Capsicum annuum HOM05D003142 ORTHO05D003600 7.6e-07 56.6 29 89.7
Gorai.011G062300 Gossypium raimondii HOM05D003142 ORTHO05D003600 7.6e-07 56.6 29 86.2
Lsat_1_v5_gn_4_91360 Lactuca sativa HOM05D003142 ORTHO05D003600 7.6e-07 56.6 29 86.2
PSO104G0149 Papaver somniferum HOM05D003142 ORTHO05D003600 7.6e-07 56.6 29 82.8
ECA232G3972 Erigeron canadensis HOM05D003142 ORTHO05D003600 9.9e-07 56.2 28 82.1
MD09G1177700 Malus domestica HOM05D003142 ORTHO05D003600 9.9e-07 56.2 29 86.2
SGA_v2.0_scaffold71G23884 Striga asiatica HOM05D003142 ORTHO05D003600 9.9e-07 56.2 28 89.3
CiPaw.01G215300 Carya illinoinensis HOM05D003142 ORTHO05D003600 1.3e-06 55.8 29 82.8
PSO421G0455 Papaver somniferum HOM05D003142 ORTHO05D003600 1.3e-06 55.8 29 86.2
MBI13_g01659_MAGBIO Magnolia biondii HOM05D000036 ORTHO05D002265 1.7e-06 55.5 29 82.8
Medtr8g022240 Medicago truncatula HOM05D003142 ORTHO05D003600 1.7e-06 55.5 29 86.2
PSO104G0224 Papaver somniferum HOM05D003142 ORTHO05D003600 1.7e-06 55.5 29 82.8
Cpa.g.sc25.154 Carica papaya HOM05D003142 ORTHO05D003600 2.2e-06 55.1 28 85.7
AUR62009925 Chenopodium quinoa HOM05D003142 ORTHO05D003600 2.9e-06 54.7 28 85.7
Gohir.D10G058200 Gossypium hirsutum HOM05D003142 ORTHO05D003600 2.9e-06 54.7 29 82.8
Prupe.3G037000 Prunus persica HOM05D003142 ORTHO05D003600 3.7e-06 54.3 29 82.8
RcHm_v2.0_Chr2g0146551 Rosa chinensis HOM05D003142 ORTHO05D003600 3.7e-06 54.3 29 82.8
Sed0022478 Sechium edule HOM05D003142 ORTHO05D003600 3.7e-06 54.3 29 82.8
TWI23G0931 Tripterygium wilfordii HOM05D003142 ORTHO05D003600 3.7e-06 54.3 29 86.2
arahy.Tifrunner.gnm1.ann1.8YD36W Arachis hypogaea HOM05D003142 ORTHO05D003600 4.9e-06 53.9 29 86.2
arahy.Tifrunner.gnm1.ann1.J5EU5Y Arachis hypogaea HOM05D003142 ORTHO05D003600 4.9e-06 53.9 29 86.2
Migut.I01108 Erythranthe guttata HOM05D003142 ORTHO05D003600 4.9e-06 53.9 29 82.8
FvH4_6g35210 Fragaria vesca HOM05D003142 ORTHO05D003600 4.9e-06 53.9 29 82.8
FAN02G2173 Fragaria x ananassa HOM05D000945 ORTHO05D003600 4.9e-06 53.9 29 82.8
FAN05G5623 Fragaria x ananassa HOM05D003142 ORTHO05D003600 4.9e-06 53.9 29 82.8
FAN09G1984 Fragaria x ananassa HOM05D003142 ORTHO05D003600 4.9e-06 53.9 29 82.8
FAN14G2660 Fragaria x ananassa HOM05D003142 ORTHO05D003600 4.9e-06 53.9 29 82.8
Lj3g0012768 Lotus japonicus HOM05D003142 ORTHO05D003600 4.9e-06 53.9 29 82.8
TPR.G16663 Trifolium pratense HOM05D003142 ORTHO05D003600 4.9e-06 53.9 29 82.8


User provided reference genes

Program Settings