Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37414 Corchorus olitorius HOM05D021695 ORTHO05D013658 2.8e-58 228.4 115 100.0
COL.COLO4_37401 Corchorus olitorius HOM05D004624 ORTHO05D005357 3.6e-42 174.9 91 94.5
Rhsim08G0187200 Rhododendron simsii HOM05D000576 ORTHO05D000368 4.6e-13 78.2 83 48.2
COL.COLO4_29714 Corchorus olitorius HOM05D000576 ORTHO05D000368 6.1e-13 77.8 92 45.7
COL.COLO4_29715 Corchorus olitorius HOM05D000576 ORTHO05D000368 7.9e-13 77.4 93 49.5
Hma1.2p1_0418F.1_g149130 Hydrangea macrophylla HOM05D021695 ORTHO05D013658 1.1e-11 73.6 83 45.8
Dinv11146 Davidia involucrata HOM05D000576 ORTHO05D000368 4.3e-11 71.6 85 47.1
Dinv20101 Davidia involucrata HOM05D000576 ORTHO05D000368 3.7e-10 68.6 93 39.8
vmacro18523 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 4.8e-10 68.2 83 41.0
Ciclev10008279m.g Citrus clementina HOM05D000576 ORTHO05D000368 6.3e-10 67.8 80 47.5
QL10p005864 Quercus lobata HOM05D000576 ORTHO05D000368 6.3e-10 67.8 80 45.0
QL10p005844 Quercus lobata HOM05D021695 ORTHO05D013658 1.4e-09 66.6 89 41.6
TWI32G0666 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.8e-09 66.2 91 35.2
Dinv38537 Davidia involucrata HOM05D000111 ORTHO05D000134 2.4e-09 65.9 80 45.0
Dinv38540 Davidia involucrata HOM05D000576 ORTHO05D013658 2.4e-09 65.9 80 45.0
QL10p005853 Quercus lobata HOM05D000576 ORTHO05D000368 4.1e-09 65.1 90 40.0
SGA_v2.0_scaffold68G22823 Striga asiatica HOM05D000576 ORTHO05D000368 6.9e-09 64.3 91 40.7
QL03p059577 Quercus lobata HOM05D000576 ORTHO05D000368 9.1e-09 63.9 84 45.2
Rhsim01G0067400 Rhododendron simsii HOM05D000576 ORTHO05D000368 9.1e-09 63.9 77 41.6
QL03p058059 Quercus lobata HOM05D000576 ORTHO05D000368 2.0e-08 62.8 81 45.7
CSS0021660 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 5.9e-08 61.2 86 33.7
QL10p005342 Quercus lobata HOM05D000576 ORTHO05D000368 5.9e-08 61.2 90 35.6
Dinv01310 Davidia involucrata HOM05D000576 ORTHO05D000368 7.7e-08 60.8 77 41.6
Dinv26720 Davidia involucrata HOM05D000576 ORTHO05D000368 7.7e-08 60.8 77 41.6
Manes.11G129800 Manihot esculenta HOM05D000576 ORTHO05D000368 7.7e-08 60.8 91 41.8
Manes.11G129716 Manihot esculenta HOM05D000576 ORTHO05D000368 1.0e-07 60.5 91 41.8
Cc03_g13650 Coffea canephora HOM05D000576 ORTHO05D000368 2.2e-07 59.3 92 34.8
Cc09_g07080 Coffea canephora HOM05D000576 ORTHO05D000368 2.2e-07 59.3 92 34.8
HanXRQChr09g0252251 Helianthus annuus HOM05D000576 ORTHO05D000368 2.2e-07 59.3 92 37.0
Lj8C98G11 Lonicera japonica HOM05D000576 ORTHO05D000368 2.2e-07 59.3 86 41.9
SGA_v2.0_scaffold44G16702 Striga asiatica HOM05D000576 ORTHO05D000368 2.2e-07 59.3 92 35.9
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 2.9e-07 58.9 92 37.0
HanXRQChr09g0252871 Helianthus annuus HOM05D000576 ORTHO05D000368 2.9e-07 58.9 92 38.0
Dinv04865 Davidia involucrata HOM05D000576 ORTHO05D000368 3.8e-07 58.5 79 43.0
Manes.03G198700 Manihot esculenta HOM05D000576 ORTHO05D000368 3.8e-07 58.5 98 35.7
CSS0018883 Camellia sinensis var. sinensis HOM05D021695 ORTHO05D013658 6.5e-07 57.8 85 38.8
Ciclev10008358m.g Citrus clementina HOM05D000576 ORTHO05D000368 6.5e-07 57.8 83 37.3
Hma1.2p1_1488F.1_g286620 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 6.5e-07 57.8 84 39.3
CSS0002595 Camellia sinensis var. sinensis HOM05D021695 ORTHO05D013658 8.5e-07 57.4 85 38.8
Dinv38504 Davidia involucrata HOM05D000576 ORTHO05D000368 8.5e-07 57.4 77 40.3
Hma1.2p1_1677F.1_g297050 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.4e-06 56.6 84 38.1
Peaxi162Scf00215g00125 Petunia axillaris HOM05D000576 ORTHO05D025766 1.4e-06 56.6 95 34.7
Rhsim08G0184100 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.4e-06 56.6 77 41.6
Phvul.003G209900 Phaseolus vulgaris HOM05D000576 ORTHO05D000368 1.9e-06 56.2 93 34.4
Prupe.1G496200 Prunus persica HOM05D000576 ORTHO05D000368 1.9e-06 56.2 88 39.8
HanXRQChr08g0221771 Helianthus annuus HOM05D000576 ORTHO05D000368 2.5e-06 55.8 92 37.0
Prupe.1G496800 Prunus persica HOM05D000576 ORTHO05D000368 2.5e-06 55.8 83 39.8
MSTRG.8963 Avicennia marina HOM05D000576 ORTHO05D000368 3.2e-06 55.5 92 32.6
EL10Ac2g04616 Beta vulgaris HOM05D000576 ORTHO05D000368 4.2e-06 55.1 83 31.3
CSS0015792 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 5.5e-06 54.7 91 31.9
Migut.F00694 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.5e-06 54.7 92 31.5
RcHm_v2.0_Chr2g0105251 Rosa chinensis HOM05D000576 ORTHO05D029628 5.5e-06 54.7 86 36.0
COL.COLO4_14986 Corchorus olitorius HOM05D000576 ORTHO05D000368 7.2e-06 54.3 94 30.9
Lj8C98T11 Lonicera japonica HOM05D000576 ORTHO05D000368 7.2e-06 54.3 80 42.5
QL04p071180 Quercus lobata HOM05D000576 ORTHO05D000368 7.2e-06 54.3 85 35.3
Cc02_g27910 Coffea canephora HOM05D000576 ORTHO05D000368 9.4e-06 53.9 82 36.6


User provided reference genes

Program Settings