Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37304 Corchorus olitorius HOM05D005916 ORTHO05D007168 5.9e-152 540.8 270 100.0
Thecc.03G145100 Theobroma cacao HOM05D005916 ORTHO05D007168 1.3e-93 347.1 205 85.4
Gorai.001G052400 Gossypium raimondii HOM05D005916 ORTHO05D007168 6.2e-93 344.7 205 84.4
Gohir.D07G049300 Gossypium hirsutum HOM05D005916 ORTHO05D007168 1.4e-92 343.6 205 84.4
Gohir.A07G044800 Gossypium hirsutum HOM05D005916 ORTHO05D007168 2.5e-86 322.8 205 82.4
Manes.06G129600 Manihot esculenta HOM05D005916 ORTHO05D007168 1.4e-81 307.0 202 79.2
Phvul.007G063000 Phaseolus vulgaris HOM05D005916 ORTHO05D007168 4.2e-81 305.4 210 75.7
Psat6g202080 Pisum sativum HOM05D005916 ORTHO05D007168 3.9e-79 298.9 207 75.8
Potri.012G113400 Populus trichocarpa HOM05D005916 ORTHO05D007168 6.7e-79 298.1 206 74.3
Glyma.10G242500 Glycine max HOM05D005916 ORTHO05D007168 8.8e-79 297.7 208 75.0
VMungo0720G1184 Vigna mungo HOM05D005916 ORTHO05D007168 8.8e-79 297.7 210 74.8
Cpa.g.sc13.218 Carica papaya HOM05D005916 ORTHO05D007168 1.1e-78 297.4 214 74.3
Sabra15G0132700 Salix brachista HOM05D005916 ORTHO05D007168 2.5e-78 296.2 205 75.6
Lj5g0003841 Lotus japonicus HOM05D005916 ORTHO05D007168 9.7e-78 294.3 209 72.7
Potri.015G110900 Populus trichocarpa HOM05D005916 ORTHO05D007168 1.3e-77 293.9 205 74.6
Dinv34531 Davidia involucrata HOM05D005916 ORTHO05D007168 4.8e-77 292.0 205 74.1
CANSAT56G4429 Cannabis sativa HOM05D005916 ORTHO05D007168 6.3e-77 291.6 206 74.3
Ciclev10032791m.g Citrus clementina HOM05D005916 ORTHO05D007168 1.1e-76 290.8 205 74.1
GSVIVG01024482001 Vitis vinifera HOM05D005916 ORTHO05D007168 9.1e-76 287.7 205 76.1
QL09p027336 Quercus lobata HOM05D005916 ORTHO05D007168 2.6e-75 286.2 204 71.1
Ca_10837_v3 Cicer arietinum L. HOM05D005916 ORTHO05D007168 3.4e-75 285.8 207 73.4
Eucgr.A02936 Eucalyptus grandis HOM05D005916 ORTHO05D007168 3.4e-75 285.8 206 74.3
FAN01G2833 Fragaria x ananassa HOM05D005916 ORTHO05D007168 3.4e-75 285.8 207 71.0
FAN10G1904 Fragaria x ananassa HOM05D005916 ORTHO05D007168 5.9e-75 285.0 210 71.0
arahy.Tifrunner.gnm1.ann1.VH0MPJ Arachis hypogaea HOM05D005916 ORTHO05D007168 7.7e-75 284.6 208 73.1
DCAR_014647 Daucus carota HOM05D005916 ORTHO05D007168 2.9e-74 282.7 211 71.1
Atru.chr6.1973 Acer truncatum HOM05D005916 ORTHO05D007168 3.8e-74 282.3 203 72.9
FAN06G3885 Fragaria x ananassa HOM05D005916 ORTHO05D007168 3.8e-74 282.3 205 72.2
RcHm_v2.0_Chr1g0373201 Rosa chinensis HOM05D005916 ORTHO05D007168 3.8e-74 282.3 207 72.0
TPR.G26100 Trifolium pratense HOM05D005916 ORTHO05D007168 5.0e-74 282.0 214 71.5
CSS0012195 Camellia sinensis var. sinensis HOM05D005916 ORTHO05D007168 6.5e-74 281.6 205 71.7
SGA_v2.0_scaffold136G34977 Striga asiatica HOM05D005916 ORTHO05D007168 1.1e-73 280.8 210 72.4
vmacro09932 Vaccinium macrocarpon HOM05D005916 ORTHO05D007168 1.4e-73 280.4 212 68.9
FvH4_7g26530 Fragaria vesca HOM05D005916 ORTHO05D007168 2.1e-72 276.6 207 72.0
MD01G1174300 Malus domestica HOM05D005916 ORTHO05D007168 2.1e-72 276.6 208 69.7
arahy.Tifrunner.gnm1.ann1.7NV6YZ Arachis hypogaea HOM05D005916 ORTHO05D007168 6.1e-72 275.0 208 72.6
SGA_v2.0_scaffold69G23310 Striga asiatica HOM05D005916 ORTHO05D007168 7.9e-72 274.6 210 70.0
Aqoxy3G02650 Aquilegia oxysepala HOM05D005916 ORTHO05D007168 1.0e-71 274.2 204 71.1
CsaV3_4G004400 Cucumis sativus L. HOM05D005916 ORTHO05D007168 1.0e-71 274.2 206 68.4
PSO782G0331 Papaver somniferum HOM05D005916 ORTHO05D007168 1.4e-71 273.9 208 69.2
Glyma.20G151600 Glycine max HOM05D005916 ORTHO05D007168 1.8e-71 273.5 207 71.0
Prupe.2G269700 Prunus persica HOM05D005916 ORTHO05D007168 2.3e-71 273.1 205 70.7
Haze_22228 Corylus avellana HOM05D005916 ORTHO05D007168 5.1e-71 271.9 213 66.7
PSO063G1306 Papaver somniferum HOM05D005916 ORTHO05D007168 8.8e-71 271.2 208 68.8
Oeu046440.1 Olea europaea HOM05D005916 ORTHO05D007168 1.1e-70 270.8 205 67.8
Hund13383 Selenicereus undatus HOM05D005916 ORTHO05D007168 7.4e-70 268.1 205 69.3
MELO3C017626.2 Cucumis melo HOM05D005916 ORTHO05D007168 9.7e-70 267.7 199 70.9
PSO541G5205 Papaver somniferum HOM05D005916 ORTHO05D007168 9.7e-70 267.7 204 69.1
EL10Ac5g12406 Beta vulgaris HOM05D005916 ORTHO05D007168 1.7e-69 266.9 211 66.4
Carub.0006s1828 Capsella rubella HOM05D005916 ORTHO05D007168 1.7e-69 266.9 208 67.8
Ah.01g021910 Amaranthus hybridus HOM05D005916 ORTHO05D007168 3.7e-69 265.8 205 67.8
Migut.F01212 Erythranthe guttata HOM05D005916 ORTHO05D007168 3.7e-69 265.8 208 68.3
Cc00_g13060 Coffea canephora HOM05D005916 ORTHO05D007168 8.2e-69 264.6 206 68.4
Medtr1g102540 Medicago truncatula HOM05D005916 ORTHO05D007168 1.1e-68 264.2 206 69.9
MSTRG.8396 Avicennia marina HOM05D005916 ORTHO05D007168 3.1e-68 262.7 212 67.5
Thhalv10014735m.g Eutrema salsugineum HOM05D005916 ORTHO05D007168 3.1e-68 262.7 210 65.7
AL6G31440 Arabidopsis lyrata HOM05D005916 ORTHO05D007168 7.0e-68 261.5 208 66.3
Sp6g24470 Schrenkiella parvula HOM05D005916 ORTHO05D007168 7.0e-68 261.5 204 68.1
Sc17g0004780 Simmondsia chinensis HOM05D005916 ORTHO05D007168 9.1e-68 261.2 211 65.9
ClCG07G017200 Citrullus lanatus HOM05D005916 ORTHO05D007168 1.2e-67 260.8 199 69.3
TWI39G0778 Tripterygium wilfordii HOM05D005916 ORTHO05D007168 1.5e-67 260.4 205 67.8
PGR083G1688 Punica granatum HOM05D005916 ORTHO05D007168 3.5e-67 259.2 188 72.3
BcaB08g36557 Brassica carinata HOM05D005916 ORTHO05D007168 4.5e-67 258.8 208 67.3
PSO675G3127 Papaver somniferum HOM05D005916 ORTHO05D007168 1.0e-66 257.7 191 72.3
MD07G1241000 Malus domestica HOM05D005916 ORTHO05D007168 1.3e-66 257.3 205 67.8
Sed0012421 Sechium edule HOM05D001364 ORTHO05D007168 1.3e-66 257.3 189 72.0
EL10Ac9g22675 Beta vulgaris HOM05D005916 ORTHO05D007168 1.7e-66 256.9 206 66.0
Lalb_Chr24g0402981 Lupinus albus HOM05D005916 ORTHO05D007168 3.8e-66 255.8 206 65.5
AT5G19910 Arabidopsis thaliana HOM05D005916 ORTHO05D007168 5.0e-66 255.4 201 69.2
CARHR192950 Cardamine hirsuta HOM05D005916 ORTHO05D007168 6.5e-66 255.0 208 67.3
CDE06G1827 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 6.5e-66 255.0 211 64.9
THA.LOC104799659 Tarenaya hassleriana HOM05D005916 ORTHO05D007168 6.5e-66 255.0 210 66.2
MBI04_g13855_MAGBIO Magnolia biondii HOM05D005916 ORTHO05D007168 8.5e-66 254.6 188 71.3
Nn6g33759 Nelumbo nucifera HOM05D005916 ORTHO05D007168 1.1e-65 254.2 209 67.0
A02p05910 Brassica napus HOM05D005916 ORTHO05D007168 4.2e-65 252.3 213 64.3
BNapus_Darmor_BZH_scaffold_38p01960 Brassica napus HOM05D005916 ORTHO05D007168 4.2e-65 252.3 213 64.3
BraA02t05543Z Brassica rapa HOM05D005916 ORTHO05D007168 4.2e-65 252.3 213 64.3
Sopen03g024920 Solanum pennellii HOM05D005916 ORTHO05D007168 4.2e-65 252.3 200 69.0
BolC9t58480H Brassica oleracea HOM05D003971 ORTHO05D004762 9.4e-65 251.1 213 66.2
ECA233G3320 Erigeron canadensis HOM05D005916 ORTHO05D007168 9.4e-65 251.1 205 66.8
PGSC0003DMG403008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 9.4e-65 251.1 199 68.8
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 1.2e-64 250.8 224 60.7
Solyc03g094030.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 2.7e-64 249.6 199 68.3
BcaC04g19397 Brassica carinata HOM05D005916 ORTHO05D007168 4.7e-64 248.8 208 67.3
Nitab4.5_0000103g0220 Nicotiana tabacum HOM05D005916 ORTHO05D007168 6.1e-64 248.4 203 66.5
C09p56130 Brassica napus HOM05D003971 ORTHO05D004762 1.0e-63 247.7 213 65.7
BolC2t06995H Brassica oleracea HOM05D005916 ORTHO05D007168 1.0e-63 247.7 214 64.0
Zm00001eb038950 Zea mays HOM05D005916 ORTHO05D007168 1.8e-63 246.9 188 69.7
AUR62029119 Chenopodium quinoa HOM05D005916 ORTHO05D007168 1.5e-62 243.8 198 65.2
Lsat_1_v5_gn_8_11541 Lactuca sativa HOM05D005916 ORTHO05D007168 3.3e-62 242.7 212 65.6
HPP92_020684 Vanilla planifolia HOM05D005916 ORTHO05D007168 7.4e-62 241.5 201 65.2
Hma1.2p1_1014F.1_g247870 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 1.4e-60 237.3 211 64.9
ATR1098G017 Amborella trichopoda HOM05D005916 ORTHO05D007168 4.1e-60 235.7 189 67.2
HanXRQChr08g0223361 Helianthus annuus HOM05D005916 ORTHO05D007168 4.1e-60 235.7 205 65.9
HanXRQChr03g0069461 Helianthus annuus HOM05D005916 ORTHO05D007168 9.1e-60 234.6 205 65.4
CiPaw.07G182800 Carya illinoinensis HOM05D005916 ORTHO05D007168 2.6e-59 233.0 207 60.9
TPR.G9644 Trifolium pratense HOM05D005916 ORTHO05D007168 2.6e-59 233.0 122 90.2
FvH4_5g39330 Fragaria vesca HOM05D005916 ORTHO05D007168 3.5e-59 232.6 141 80.1
FAN08G1750 Fragaria x ananassa HOM05D005916 ORTHO05D007168 3.5e-59 232.6 141 80.1
Nitab4.5_0003429g0010 Nicotiana tabacum HOM05D005916 ORTHO05D007168 4.5e-59 232.3 203 63.5
FAN18G1579 Fragaria x ananassa HOM05D005916 ORTHO05D007168 3.8e-58 229.2 141 79.4
QL02p099223 Quercus lobata HOM05D005916 ORTHO05D007168 1.2e-56 224.2 209 60.8
FAN25G1847 Fragaria x ananassa HOM05D005916 ORTHO05D007168 4.7e-56 222.2 149 73.8
Os10g0564100 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 4.7e-56 222.2 192 62.5
Rhsim09G0188200 Rhododendron simsii HOM05D001364 ORTHO05D001316 3.0e-55 219.5 205 59.5
CAN.G297.9 Capsicum annuum HOM05D005916 ORTHO05D007168 4.0e-55 219.2 205 61.5
CDE06G2153 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 8.8e-55 218.0 211 56.9
Dinv21889 Davidia involucrata HOM05D005916 ORTHO05D007168 9.8e-54 214.5 199 61.3
Atru.chr6.592 Acer truncatum HOM05D005916 ORTHO05D007168 2.8e-53 213.0 157 67.5
Os07g0164600 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 1.8e-52 210.3 209 57.9
Lj8A49T46 Lonicera japonica HOM05D005916 ORTHO05D007168 1.6e-51 207.2 157 68.2
Mapoly0098s0031 Marchantia polymorpha HOM05D005916 ORTHO05D007168 2.0e-51 206.8 148 70.9
Pp3c26_180 Physcomitrium patens HOM05D005916 ORTHO05D007168 5.0e-50 202.2 129 72.1
AUR62015003 Chenopodium quinoa HOM05D005916 ORTHO05D007168 8.5e-50 201.4 107 87.9
SalBow2G2523 Salvia bowleyana HOM05D005916 ORTHO05D007168 2.1e-48 196.8 162 64.8
SEGI_39874 Sequoiadendron giganteum HOM05D005916 ORTHO05D007168 5.2e-47 192.2 108 83.3
AagrBONN_evm.TU.Sc2ySwM_362.2892 Anthoceros agrestis HOM05D005916 ORTHO05D007168 1.5e-46 190.7 112 76.8
Hma1.2p1_1014F.1_g247880 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 1.5e-46 190.7 91 95.6
CAN.G706.26 Capsicum annuum HOM05D005916 ORTHO05D007168 8.3e-45 184.9 214 53.3
SMO197G0072 Selaginella moellendorffii HOM05D005916 ORTHO05D007168 3.9e-34 149.4 82 81.7
Actinidia31761 Actinidia chinensis HOM05D005916 ORTHO05D007168 1.9e-33 147.1 210 45.7
PRCOL_00001580 Prasinoderma coloniale HOM05D005916 ORTHO05D007168 5.8e-30 135.6 101 58.4
Peaxi162Scf00073g01818 Petunia axillaris HOM05D005916 ORTHO05D007168 7.5e-30 135.2 154 52.6
unitig_90.g27553 Utricularia gibba HOM05D005916 ORTHO05D007168 3.5e-27 126.3 132 54.5
Dinv34527 Davidia involucrata HOM05D005916 ORTHO05D007168 8.6e-26 121.7 59 91.5
Actinidia01032 Actinidia chinensis HOM05D005916 ORTHO05D007168 5.2e-23 112.5 208 41.8
MCO04G185 Micromonas commoda HOM05D005916 ORTHO05D007168 1.5e-22 110.9 93 53.8
Pp3c13_24550 Physcomitrium patens HOM05D005916 ORTHO05D007168 2.4e-20 103.6 105 47.6
CBR_g3263 Chara braunii HOM05D000019 ORTHO05D000353 7.3e-17 92.0 83 55.4
Cre12.g520850 Chlamydomonas reinhardtii HOM05D005916 ORTHO05D007168 4.9e-13 79.3 113 38.9
FAN21G1143 Fragaria x ananassa HOM05D005916 ORTHO05D007168 4.6e-11 72.8 53 60.4
SalBow2G0368 Salvia bowleyana HOM05D005916 ORTHO05D007168 4.6e-11 72.8 38 84.2
Solyc03g094070.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 1.7e-10 70.9 85 45.9
FAN11G3144 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.2e-08 64.7 106 45.3
Dinv07271 Davidia involucrata HOM05D005916 ORTHO05D007168 8.9e-07 58.5 36 75.0
Cfa025999 Carpinus fangiana HOM05D005916 ORTHO05D007168 1.2e-06 58.2 83 43.4


User provided reference genes

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