Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37175 Corchorus olitorius HOM05D000165 ORTHO05D157362 7.2e-16 85.9 37 100.0
Cc08_g12430 Coffea canephora HOM05D000165 ORTHO05D000719 1.2e-07 58.5 26 92.3
CSS0021048 Camellia sinensis var. sinensis HOM05D000165 ORTHO05D000719 2.7e-07 57.4 26 88.5
CSS0041705 Camellia sinensis var. sinensis HOM05D000165 ORTHO05D000719 2.7e-07 57.4 26 88.5
Duzib068G0870 Durio zibethinus HOM05D000165 ORTHO05D000719 2.7e-07 57.4 26 88.5
Thecc.03G251500 Theobroma cacao HOM05D000165 ORTHO05D000719 2.7e-07 57.4 26 88.5
Glyma.01G209500 Glycine max HOM05D000165 ORTHO05D000719 3.6e-07 57.0 26 88.5
Glyma.11G032700 Glycine max HOM05D000165 ORTHO05D000719 3.6e-07 57.0 26 88.5
Duzib136G0001 Durio zibethinus HOM05D000165 ORTHO05D000719 6.1e-07 56.2 26 84.6
COL.COLO4_37178 Corchorus olitorius HOM05D000165 ORTHO05D000719 7.9e-07 55.8 26 84.6
Gohir.A12G217100 Gossypium hirsutum HOM05D000165 ORTHO05D000719 7.9e-07 55.8 26 84.6
Gohir.D12G219600 Gossypium hirsutum HOM05D000165 ORTHO05D000719 7.9e-07 55.8 26 84.6
Gorai.008G235300 Gossypium raimondii HOM05D000165 ORTHO05D000719 7.9e-07 55.8 26 84.6
Lj2C217T2 Lonicera japonica HOM05D000165 ORTHO05D000719 7.9e-07 55.8 26 84.6
Lj2g0002012 Lotus japonicus HOM05D000165 ORTHO05D000719 7.9e-07 55.8 26 84.6
Potri.003G076900 Populus trichocarpa HOM05D000165 ORTHO05D000719 7.9e-07 55.8 26 84.6
Ca_24577_v3 Cicer arietinum L. HOM05D000165 ORTHO05D000719 1.0e-06 55.5 26 84.6
Medtr5g012600 Medicago truncatula HOM05D000165 ORTHO05D000719 1.0e-06 55.5 26 84.6
Nn6g33960 Nelumbo nucifera HOM05D000165 ORTHO05D000719 1.0e-06 55.5 26 84.6
Sabra03G0047300 Salix brachista HOM05D000165 ORTHO05D000719 1.0e-06 55.5 26 84.6
Nitab4.5_0005960g0020 Nicotiana tabacum HOM05D000165 ORTHO05D000719 1.4e-06 55.1 26 84.6
Peaxi162Scf00174g00026 Petunia axillaris HOM05D000165 ORTHO05D000719 1.4e-06 55.1 26 84.6
HanXRQChr16g0511601 Helianthus annuus HOM05D000165 ORTHO05D000719 1.8e-06 54.7 26 80.8
PGR042G0176 Punica granatum HOM05D000165 ORTHO05D000719 1.8e-06 54.7 26 84.6
TAR374G1606 Trochodendron aralioides HOM05D000165 ORTHO05D000719 1.8e-06 54.7 26 84.6
GSVIVG01001327001 Vitis vinifera HOM05D000165 ORTHO05D000719 2.3e-06 54.3 26 80.8
Dinv39147 Davidia involucrata HOM05D000165 ORTHO05D000719 3.0e-06 53.9 26 80.8
MBI02_g16012_MAGBIO Magnolia biondii HOM05D000165 ORTHO05D000719 3.0e-06 53.9 26 80.8
Manes.02G039500 Manihot esculenta HOM05D000165 ORTHO05D000719 3.0e-06 53.9 26 80.8
Nn1g00996 Nelumbo nucifera HOM05D000165 ORTHO05D000719 3.0e-06 53.9 26 80.8
Hund14537 Selenicereus undatus HOM05D000165 ORTHO05D000719 3.0e-06 53.9 26 80.8
Sc22g0000900 Simmondsia chinensis HOM05D000165 ORTHO05D000719 3.0e-06 53.9 26 80.8
Actinidia14428 Actinidia chinensis HOM05D000165 ORTHO05D000719 3.9e-06 53.5 26 76.9
Lsat_1_v5_gn_6_17860 Lactuca sativa HOM05D000165 ORTHO05D000719 3.9e-06 53.5 26 76.9
Psat2g178160 Pisum sativum HOM05D000165 ORTHO05D000719 3.9e-06 53.5 26 80.8
SalBow6G0191 Salvia bowleyana HOM05D000165 ORTHO05D000719 3.9e-06 53.5 26 84.6
TAR374G1124 Trochodendron aralioides HOM05D000165 ORTHO05D000719 3.9e-06 53.5 26 80.8
TAR375G0240 Trochodendron aralioides HOM05D000165 ORTHO05D000719 3.9e-06 53.5 26 80.8
EL10Ac5g13069 Beta vulgaris HOM05D000165 ORTHO05D000719 5.1e-06 53.1 26 76.9
ClCG01G004040 Citrullus lanatus HOM05D000165 ORTHO05D000719 5.1e-06 53.1 26 76.9
Sed0006460 Sechium edule HOM05D000165 ORTHO05D000719 5.1e-06 53.1 26 76.9
MBI04_g09498_MAGBIO Magnolia biondii HOM05D000165 ORTHO05D000719 8.8e-06 52.4 26 84.6


User provided reference genes

Program Settings