Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 1.1e-217 759.6 375 100.0
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 4.8e-200 701.0 375 92.5
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 2.4e-199 698.7 366 92.9
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 4.5e-198 694.5 367 92.1
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 1.3e-197 693.0 367 91.6
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 3.2e-196 688.3 373 90.1
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 1.2e-190 669.8 365 88.2
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.5e-190 669.5 365 88.5
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 2.9e-189 665.2 366 87.2
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 4.9e-189 664.5 363 87.9
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 1.1e-188 663.3 375 84.5
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 4.2e-188 661.4 363 86.8
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 7.1e-188 660.6 365 86.0
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 6.0e-187 657.5 368 85.9
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 6.0e-187 657.5 365 86.8
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 1.8e-186 656.0 362 87.6
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 2.3e-186 655.6 367 85.8
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 3.0e-186 655.2 365 85.8
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 6.7e-186 654.1 361 86.4
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 6.7e-186 654.1 367 85.6
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 1.5e-185 652.9 377 83.8
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 3.3e-185 651.7 362 85.6
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 4.3e-185 651.4 363 86.5
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 4.3e-185 651.4 363 84.6
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 1.6e-184 649.4 365 85.5
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 1.6e-184 649.4 365 85.8
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 1.6e-184 649.4 362 85.4
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 2.8e-184 648.7 362 85.4
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 6.3e-184 647.5 363 85.1
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 8.2e-184 647.1 363 84.0
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 1.1e-183 646.7 361 85.3
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 3.1e-183 645.2 371 83.8
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 4.1e-183 644.8 373 82.8
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 2.0e-182 642.5 360 85.8
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 1.3e-181 639.8 363 83.5
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 3.8e-181 638.3 362 84.3
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 6.5e-181 637.5 362 82.9
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 1.1e-180 636.7 396 80.6
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 1.4e-180 636.3 362 83.4
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.9e-180 636.0 362 83.7
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 2.5e-180 635.6 364 82.1
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 3.2e-180 635.2 363 83.5
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 3.2e-180 635.2 367 82.8
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 4.2e-180 634.8 363 83.5
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 9.4e-180 633.6 362 83.1
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 9.4e-180 633.6 363 82.6
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 2.7e-179 632.1 371 80.6
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 6.1e-179 630.9 363 82.1
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 1.8e-178 629.4 361 80.3
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.5e-177 626.3 366 80.6
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 2.0e-177 625.9 367 80.7
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 3.3e-177 625.2 362 79.6
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 8.2e-176 620.5 367 79.6
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 5.3e-175 617.8 373 79.6
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 5.3e-175 617.8 361 80.1
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 1.5e-174 616.3 363 82.4
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 2.0e-174 615.9 363 82.4
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 3.4e-174 615.1 367 78.7
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 3.4e-174 615.1 367 78.7
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 5.9e-174 614.4 362 80.1
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 7.7e-174 614.0 367 78.5
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 5.5e-172 607.8 362 80.7
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 9.4e-172 607.1 360 81.9
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 6.1e-171 604.4 360 81.1
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 7.9e-171 604.0 360 81.4
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 2.3e-170 602.4 352 81.5
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 3.9e-170 601.7 368 78.5
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 3.9e-170 601.7 362 80.1
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 2.8e-168 595.5 375 78.4
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 1.4e-167 593.2 380 75.8
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 3.1e-167 592.0 382 74.9
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 4.1e-167 591.7 360 79.4
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 4.1e-167 591.7 374 75.9
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 9.1e-167 590.5 360 79.4
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 2.6e-166 589.0 371 76.8
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 6.5e-165 584.3 360 78.6
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 1.1e-164 583.6 360 77.8
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 1.9e-164 582.8 367 77.1
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 2.5e-164 582.4 367 76.6
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 3.2e-164 582.0 368 75.0
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 6.1e-163 577.8 357 77.3
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 3.2e-156 555.4 367 71.9
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.6e-155 553.1 352 76.7
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 1.4e-154 550.1 366 73.5
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 1.5e-153 546.6 309 85.8
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 9.4e-148 527.3 303 83.5
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 1.8e-146 523.1 285 89.5
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 8.3e-144 514.2 293 84.3
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 5.4e-143 511.5 267 90.3
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 1.5e-140 503.4 365 66.3
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 2.6e-137 492.7 362 66.3
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 3.7e-136 488.8 367 64.9
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 3.1e-135 485.7 371 63.3
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 2.3e-133 479.6 271 83.4
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 4.1e-127 458.8 306 72.2
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 8.6e-117 424.5 250 82.8
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.8e-115 419.5 411 55.5
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 4.7e-115 418.7 227 85.5
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 8.9e-114 414.5 223 85.2
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 1.3e-112 410.6 227 86.8
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 1.6e-86 323.9 182 83.0
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 6.7e-69 265.4 212 65.6
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 2.1e-54 217.2 116 84.5
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 5.1e-53 212.6 118 82.2
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 1.1e-50 204.9 114 81.6
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.9e-48 196.8 128 73.4
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 6.5e-48 195.7 116 79.3
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 8.5e-48 195.3 115 78.3
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 8.5e-48 195.3 115 78.3
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.0e-45 188.3 128 71.9
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.1e-34 151.8 97 76.3
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 9.1e-34 148.7 88 77.3
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.2e-19 100.9 69 66.7
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 7.3e-15 85.9 54 75.9
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 1.2e-14 85.1 54 74.1
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 1.6e-14 84.7 54 75.9
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 8.9e-13 79.0 54 70.4
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 2.2e-11 74.3 282 26.2
Pp3s34_460 Physcomitrium patens HOM05D001684 ORTHO05D018939 8.3e-11 72.4 283 26.5
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 3.2e-10 70.5 43 72.1
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 3.3e-07 60.5 34 85.3
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 1.2e-06 58.5 211 27.0


User provided reference genes

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