Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_37105 Corchorus olitorius HOM05D002756 ORTHO05D002896 8.9e-178 627.1 380 100.0
Duzib068G0659 Durio zibethinus HOM05D002756 ORTHO05D002896 4.2e-87 325.9 395 58.7
Duzib205G1850 Durio zibethinus HOM05D002756 ORTHO05D002896 1.8e-82 310.5 416 54.8
Thecc.03G246800 Theobroma cacao HOM05D002756 ORTHO05D002896 7.0e-82 308.5 389 58.1
Duzib084G0904 Durio zibethinus HOM05D002756 ORTHO05D002896 1.9e-79 300.4 419 53.7
Gohir.D12G217500 Gossypium hirsutum HOM05D002756 ORTHO05D002896 4.0e-53 213.0 339 50.7
Gorai.008G233100 Gossypium raimondii HOM05D002756 ORTHO05D002896 6.4e-51 205.7 336 53.0
Atru.chr9.1260 Acer truncatum HOM05D002756 ORTHO05D002896 1.4e-45 188.0 401 46.1
Gohir.A12G214900 Gossypium hirsutum HOM05D002756 ORTHO05D002896 2.9e-43 180.3 339 49.6
Sabra03G0049800 Salix brachista HOM05D002756 ORTHO05D002896 1.3e-40 171.4 406 41.4
Ciclev10019703m.g Citrus clementina HOM05D002756 ORTHO05D002896 2.3e-40 170.6 367 44.7
Manes.02G041900 Manihot esculenta HOM05D002756 ORTHO05D002896 1.2e-38 164.9 412 39.3
QL12p010923 Quercus lobata HOM05D002756 ORTHO05D002896 9.9e-36 155.2 484 37.4
QL12p011144 Quercus lobata HOM05D002756 ORTHO05D002896 1.3e-35 154.8 484 37.4
FvH4_5g19610 Fragaria vesca HOM05D002756 ORTHO05D002896 3.5e-33 146.7 412 39.1
FAN18G1828 Fragaria x ananassa HOM05D002756 ORTHO05D002896 3.0e-32 143.7 412 38.8
RcHm_v2.0_Chr7g0204301 Rosa chinensis HOM05D002756 ORTHO05D002896 3.0e-32 143.7 421 39.0
Prupe.5G064100 Prunus persica HOM05D002756 ORTHO05D002896 2.5e-31 140.6 428 38.1
CiPaw.12G049400 Carya illinoinensis HOM05D002756 ORTHO05D002896 5.6e-31 139.4 404 36.9
Potri.001G155000 Populus trichocarpa HOM05D002756 ORTHO05D002896 5.6e-31 139.4 451 36.8
FAN08G2407 Fragaria x ananassa HOM05D002756 ORTHO05D002896 2.8e-30 137.1 421 37.3
AUR62007124 Chenopodium quinoa HOM05D002756 ORTHO05D002896 1.8e-29 134.4 356 39.9
FAN04G0448 Fragaria x ananassa HOM05D002756 ORTHO05D002896 1.8e-29 134.4 423 36.9
FAN13G0091 Fragaria x ananassa HOM05D002756 ORTHO05D002896 3.1e-29 133.7 425 38.8
AUR62019993 Chenopodium quinoa HOM05D002756 ORTHO05D002896 1.2e-28 131.7 383 38.6
Hma1.2p1_1196F.1_g266030 Hydrangea macrophylla HOM05D002756 ORTHO05D002896 7.6e-28 129.0 377 38.7
Hma1.2p1_1335F.1_g276370 Hydrangea macrophylla HOM05D002756 ORTHO05D002896 7.6e-28 129.0 377 38.7
MD04G1061300 Malus domestica HOM05D002756 ORTHO05D002896 7.6e-28 129.0 449 36.1
CANSAT21G1520 Cannabis sativa HOM05D002756 ORTHO05D002896 3.8e-27 126.7 341 37.2
Sabra01G0124600 Salix brachista HOM05D002756 ORTHO05D002896 1.9e-26 124.4 390 37.7
TAR375G0301 Trochodendron aralioides HOM05D002756 ORTHO05D002896 2.1e-25 120.9 458 34.5
CiPaw.11G082800 Carya illinoinensis HOM05D002756 ORTHO05D002896 1.7e-24 117.9 416 37.5
TWI81G0105 Tripterygium wilfordii HOM05D002756 ORTHO05D002896 1.7e-24 117.9 362 37.0
Lalb_Chr05g0221081 Lupinus albus HOM05D002756 ORTHO05D002896 5.1e-24 116.3 369 34.7
Haze_07935 Corylus avellana HOM05D002756 ORTHO05D002896 6.6e-24 115.9 366 37.7
CSS0004447 Camellia sinensis var. sinensis HOM05D002756 ORTHO05D002896 2.5e-23 114.0 400 37.8
Ah.12g054420 Amaranthus hybridus HOM05D002756 ORTHO05D002896 1.1e-21 108.6 397 35.0
ClCG10G002500 Citrullus lanatus HOM05D002756 ORTHO05D002896 1.8e-21 107.8 418 34.2
Lj4g0006676 Lotus japonicus HOM05D002756 ORTHO05D002896 1.8e-21 107.8 427 30.7
Nn6g33844 Nelumbo nucifera HOM05D002756 ORTHO05D002896 4.0e-21 106.7 426 37.8
TAR629G2869 Trochodendron aralioides HOM05D002756 ORTHO05D002896 5.3e-21 106.3 423 34.8
EL10Ac5g12331 Beta vulgaris HOM05D002756 ORTHO05D002896 2.0e-20 104.4 390 32.8
TAR629G0742 Trochodendron aralioides HOM05D002756 ORTHO05D002896 2.0e-20 104.4 423 35.0
Solyc08g078290.1 Solanum lycopersicum HOM05D002756 ORTHO05D002896 2.6e-20 104.0 368 34.2
Gohir.A03G006140 Gossypium hirsutum HOM05D002756 ORTHO05D002896 3.4e-20 103.6 88 71.6
Potri.003G079900 Populus trichocarpa HOM05D002756 ORTHO05D002896 4.5e-20 103.2 419 35.6
vmacro00014 Vaccinium macrocarpon HOM05D002756 ORTHO05D002896 7.6e-20 102.4 365 36.4
Sopen08g026790 Solanum pennellii HOM05D002756 ORTHO05D002896 1.3e-19 101.7 372 36.3
Cfa012698 Carpinus fangiana HOM05D002756 ORTHO05D002896 1.7e-19 101.3 378 36.2
Eucgr.E00399 Eucalyptus grandis HOM05D002756 ORTHO05D002896 2.2e-19 100.9 449 35.0
Lalb_Chr09g0329931 Lupinus albus HOM05D002756 ORTHO05D002896 2.2e-19 100.9 352 34.7
Gohir.D03G166200 Gossypium hirsutum HOM05D002756 ORTHO05D002896 6.4e-19 99.4 153 47.1
Nitab4.5_0007283g0010 Nicotiana tabacum HOM05D002756 ORTHO05D002896 6.4e-19 99.4 405 37.3
Gorai.003G175700 Gossypium raimondii HOM05D002756 ORTHO05D002896 2.4e-18 97.4 153 46.4
Nn6g33847 Nelumbo nucifera HOM05D002756 ORTHO05D002896 2.4e-18 97.4 423 37.4
Nitab4.5_0002601g0020 Nicotiana tabacum HOM05D002756 ORTHO05D002896 3.2e-18 97.1 411 33.6
PGR042G1682 Punica granatum HOM05D002756 ORTHO05D002896 9.3e-18 95.5 405 31.1
Aqoxy3G02766 Aquilegia oxysepala HOM05D002756 ORTHO05D002896 1.2e-17 95.1 410 32.7
Rhsim11G0050900 Rhododendron simsii HOM05D002756 ORTHO05D002896 1.6e-17 94.7 388 34.3
PSO732G0525 Papaver somniferum HOM05D002756 ORTHO05D002896 3.5e-17 93.6 415 33.5
Peaxi162Scf00346g00062 Petunia axillaris HOM05D002756 ORTHO05D002896 6.0e-17 92.8 425 35.8
PGSC0003DMG400026237 Solanum tuberosum HOM05D002756 ORTHO05D002896 6.0e-17 92.8 375 32.3
Cpa.g.sc89.63 Carica papaya HOM05D002756 ORTHO05D002896 7.9e-17 92.4 162 43.2
Cc08_g12030 Coffea canephora HOM05D002756 ORTHO05D002896 1.3e-16 91.7 424 30.9
Sed0017596 Sechium edule HOM05D002756 ORTHO05D002896 3.0e-16 90.5 340 37.9
MELO3C013922.2 Cucumis melo HOM05D002756 ORTHO05D002896 3.9e-16 90.1 389 31.4
CsaV3_3G002530 Cucumis sativus L. HOM05D002756 ORTHO05D002896 1.1e-15 88.6 434 31.8
Dinv39178 Davidia involucrata HOM05D002756 ORTHO05D002896 3.3e-15 87.0 352 34.7
Gorai.003G175800 Gossypium raimondii HOM05D002756 ORTHO05D002896 3.3e-15 87.0 153 44.4
DCAR_008518 Daucus carota HOM05D002756 ORTHO05D002896 9.6e-15 85.5 376 30.1
Lj8C270T8 Lonicera japonica HOM05D002756 ORTHO05D002896 1.3e-14 85.1 404 34.2
Lalb_Chr16g0386581 Lupinus albus HOM05D002756 ORTHO05D002896 1.6e-14 84.7 189 41.3
Sc07g0009180 Simmondsia chinensis HOM05D002756 ORTHO05D002896 8.1e-14 82.4 315 38.4
MD06G1054900 Malus domestica HOM05D002756 ORTHO05D002896 1.4e-13 81.6 131 44.3
PSO675G5676 Papaver somniferum HOM05D002756 ORTHO05D002896 3.1e-13 80.5 412 33.5
TPR.G37630 Trifolium pratense HOM05D002756 ORTHO05D002896 5.3e-13 79.7 346 30.6
Gohir.A03G006260 Gossypium hirsutum HOM05D002756 ORTHO05D002896 1.2e-12 78.6 142 41.5
CAN.G1178.4 Capsicum annuum HOM05D002756 ORTHO05D002896 2.9e-11 73.9 442 28.3
Dinv21670 Davidia involucrata HOM05D002756 ORTHO05D002896 1.9e-10 71.2 378 33.9
Glyma.17G144800 Glycine max HOM05D002756 ORTHO05D002896 2.5e-10 70.9 294 32.3
arahy.Tifrunner.gnm1.ann1.73EWJC Arachis hypogaea HOM05D002756 ORTHO05D002896 4.2e-10 70.1 369 29.8
Ca_21993_v3 Cicer arietinum L. HOM05D002756 ORTHO05D002896 9.3e-10 68.9 341 30.8
VMungo0251G0835 Vigna mungo HOM05D002756 ORTHO05D002896 2.1e-09 67.8 302 31.1
Peaxi162Scf00190g00123 Petunia axillaris HOM05D002756 ORTHO05D002896 2.7e-09 67.4 165 38.8
Actinidia14397 Actinidia chinensis HOM05D002756 ORTHO05D002896 3.5e-09 67.0 372 33.1
arahy.Tifrunner.gnm1.ann1.X9KLSS Arachis hypogaea HOM05D002756 ORTHO05D002896 3.5e-09 67.0 387 30.0
Medtr4g100530 Medicago truncatula HOM05D002756 ORTHO05D002896 4.6e-09 66.6 344 28.5
GSVIVG01018249001 Vitis vinifera HOM05D001866 ORTHO05D001915 4.6e-09 66.6 131 39.7
HanXRQChr17g0549241 Helianthus annuus HOM05D002756 ORTHO05D002896 6.0e-09 66.2 390 31.0
vmacro22653 Vaccinium macrocarpon HOM05D002756 ORTHO05D002896 6.0e-09 66.2 131 44.3
Potri.002G136600 Populus trichocarpa HOM05D002756 ORTHO05D002896 7.9e-09 65.9 113 38.9
GSVIVG01005822001 Vitis vinifera HOM05D002756 ORTHO05D002896 7.9e-09 65.9 348 31.9
arahy.Tifrunner.gnm1.ann1.4S09TY Arachis hypogaea HOM05D002756 ORTHO05D002896 2.5e-07 60.8 412 30.3
Nitab4.5_0000506g0050 Nicotiana tabacum HOM05D002756 ORTHO05D002896 2.5e-07 60.8 161 36.6
Prupe.2G127500 Prunus persica HOM05D002756 ORTHO05D002896 3.3e-07 60.5 405 28.9
Sabra02G0105900 Salix brachista HOM05D002756 ORTHO05D002896 4.3e-07 60.1 113 36.3
CAN.G62.18 Capsicum annuum HOM05D002756 ORTHO05D002896 5.7e-07 59.7 152 36.8
Phvul.003G223300 Phaseolus vulgaris HOM05D002756 ORTHO05D002896 5.7e-07 59.7 300 33.3
CARHR223410 Cardamine hirsuta HOM05D002756 ORTHO05D002896 9.6e-07 58.9 41 75.6
FAN01G1526 Fragaria x ananassa HOM05D002756 ORTHO05D002896 9.6e-07 58.9 147 38.1
Psat4g073480 Pisum sativum HOM05D002756 ORTHO05D002896 1.3e-06 58.5 390 27.2
Nitab4.5_0002206g0010 Nicotiana tabacum HOM05D002756 ORTHO05D002896 2.1e-06 57.8 158 35.4
Migut.A01149 Erythranthe guttata HOM05D002756 ORTHO05D002896 3.7e-06 57.0 132 40.9
Potri.014G045300 Populus trichocarpa HOM05D002756 ORTHO05D002896 3.7e-06 57.0 167 31.1
Nitab4.5_0000618g0140 Nicotiana tabacum HOM05D002756 ORTHO05D002896 4.8e-06 56.6 151 39.1
Sabra14G0033200 Salix brachista HOM05D002756 ORTHO05D002896 4.8e-06 56.6 133 33.1
Sp7g17320 Schrenkiella parvula HOM05D002756 ORTHO05D002896 4.8e-06 56.6 40 75.0
Cc02_g24920 Coffea canephora HOM05D002756 ORTHO05D002896 6.2e-06 56.2 111 38.7
PSO782G0082 Papaver somniferum HOM05D002756 ORTHO05D002896 6.2e-06 56.2 209 31.1
Sopen06g020970 Solanum pennellii HOM05D002756 ORTHO05D002896 6.2e-06 56.2 147 40.1
arahy.Tifrunner.gnm1.ann1.X0SKZJ Arachis hypogaea HOM05D002756 ORTHO05D002896 8.2e-06 55.8 369 28.7
PSO063G5636 Papaver somniferum HOM05D002756 ORTHO05D002896 8.2e-06 55.8 208 31.2


User provided reference genes

Program Settings