Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_36770 Corchorus olitorius HOM05D000291 ORTHO05D004665 8.0e-67 256.9 126 100.0
Duzib138G1548 Durio zibethinus HOM05D000291 ORTHO05D008053 1.8e-10 69.7 45 71.1
Thecc.01G182000 Theobroma cacao HOM05D000291 ORTHO05D008053 6.9e-10 67.8 39 76.9
Cc10_g12650 Coffea canephora HOM05D000291 ORTHO05D008053 1.2e-09 67.0 60 56.7
Oeu007118.1 Olea europaea HOM05D000291 ORTHO05D008053 2.0e-09 66.2 47 68.1
Manes.13G066100 Manihot esculenta HOM05D000291 ORTHO05D008053 2.6e-09 65.9 39 74.4
THA.LOC104801006 Tarenaya hassleriana HOM05D000291 ORTHO05D008053 3.4e-09 65.5 59 50.8
CiPaw.04G110300 Carya illinoinensis HOM05D000291 ORTHO05D008053 5.8e-09 64.7 60 50.0
Nitab4.5_0008424g0010 Nicotiana tabacum HOM05D000291 ORTHO05D008053 7.6e-09 64.3 39 71.8
Peaxi162Scf00047g00204 Petunia axillaris HOM05D000291 ORTHO05D008053 7.6e-09 64.3 39 71.8
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 7.6e-09 64.3 42 66.7
Solyc12g006000.1 Solanum lycopersicum HOM05D000291 ORTHO05D008053 7.6e-09 64.3 39 71.8
Sopen12g001970 Solanum pennellii HOM05D000291 ORTHO05D008053 7.6e-09 64.3 39 71.8
PGSC0003DMG400013900 Solanum tuberosum HOM05D000291 ORTHO05D008053 7.6e-09 64.3 39 71.8
CAN.G931.4 Capsicum annuum HOM05D000291 ORTHO05D008053 9.9e-09 63.9 39 71.8
Duzib133G0477 Durio zibethinus HOM05D000291 ORTHO05D008053 9.9e-09 63.9 38 73.7
AT1G05020 Arabidopsis thaliana HOM05D000291 ORTHO05D008053 1.3e-08 63.5 61 52.5
BcaC07g36868 Brassica carinata HOM05D000291 ORTHO05D008053 1.3e-08 63.5 48 58.3
A08p36610 Brassica napus HOM05D000291 ORTHO05D008053 1.3e-08 63.5 48 58.3
C08p01630 Brassica napus HOM05D000291 ORTHO05D008053 1.3e-08 63.5 48 58.3
BolC8t46966H Brassica oleracea HOM05D000291 ORTHO05D008053 1.3e-08 63.5 48 58.3
BraA08t35563Z Brassica rapa HOM05D000291 ORTHO05D008053 1.3e-08 63.5 48 58.3
CAN.G1558.2 Capsicum annuum HOM05D000291 ORTHO05D008053 1.3e-08 63.5 38 73.7
CARHR004450 Cardamine hirsuta HOM05D000291 ORTHO05D008053 1.3e-08 63.5 58 53.4
Nitab4.5_0000482g0260 Nicotiana tabacum HOM05D000291 ORTHO05D008053 1.3e-08 63.5 38 73.7
Peaxi162Scf00921g00216 Petunia axillaris HOM05D000291 ORTHO05D008053 1.3e-08 63.5 38 73.7
Solyc07g049380.1 Solanum lycopersicum HOM05D000291 ORTHO05D008053 1.3e-08 63.5 38 73.7
Sopen07g024720 Solanum pennellii HOM05D000291 ORTHO05D008053 1.3e-08 63.5 38 73.7
AL1G14770 Arabidopsis lyrata HOM05D000291 ORTHO05D008053 1.7e-08 63.2 51 58.8
BcaC05g24411 Brassica carinata HOM05D000291 ORTHO05D008053 1.7e-08 63.2 48 62.5
A10p03520 Brassica napus HOM05D000291 ORTHO05D008053 1.7e-08 63.2 48 62.5
C05p03210 Brassica napus HOM05D000291 ORTHO05D008053 1.7e-08 63.2 48 62.5
BolC5t29101H Brassica oleracea HOM05D000291 ORTHO05D008053 1.7e-08 63.2 48 62.5
BraA10t42629Z Brassica rapa HOM05D000291 ORTHO05D008053 1.7e-08 63.2 48 62.5
Haze_12767 Corylus avellana HOM05D000291 ORTHO05D008053 1.7e-08 63.2 39 69.2
CSS0011787 Camellia sinensis var. sinensis HOM05D000291 ORTHO05D008053 2.2e-08 62.8 39 69.2
CSS0031439 Camellia sinensis var. sinensis HOM05D000291 ORTHO05D008053 2.2e-08 62.8 39 69.2
Carub.0001s0428 Capsella rubella HOM05D000291 ORTHO05D008053 2.2e-08 62.8 48 62.5
Dinv08719 Davidia involucrata HOM05D000291 ORTHO05D008053 2.2e-08 62.8 39 69.2
Lalb_Chr18g0049971 Lupinus albus HOM05D000291 ORTHO05D008053 2.2e-08 62.8 60 51.7
Sp1g03900 Schrenkiella parvula HOM05D000291 ORTHO05D008053 2.2e-08 62.8 48 62.5
GSVIVG01030504001 Vitis vinifera HOM05D000291 ORTHO05D008053 2.2e-08 62.8 38 71.1
Ca_16286_v3 Cicer arietinum L. HOM05D000291 ORTHO05D008053 2.9e-08 62.4 60 48.3
Thhalv10007033m.g Eutrema salsugineum HOM05D000291 ORTHO05D008053 2.9e-08 62.4 39 69.2
PGSC0003DMG400000664 Solanum tuberosum HOM05D000291 ORTHO05D008053 2.9e-08 62.4 38 71.1
THA.LOC104826133 Tarenaya hassleriana HOM05D000291 ORTHO05D008053 2.9e-08 62.4 58 51.7
TWI36G1187 Tripterygium wilfordii HOM05D000291 ORTHO05D008053 2.9e-08 62.4 60 51.7
Actinidia03593 Actinidia chinensis HOM05D000291 ORTHO05D008053 3.8e-08 62.0 39 66.7
BcaB02g06892 Brassica carinata HOM05D000291 ORTHO05D008053 3.8e-08 62.0 49 59.2
Ciclev10014695m.g Citrus clementina HOM05D000291 ORTHO05D008053 3.8e-08 62.0 46 60.9
MD09G1114300 Malus domestica HOM05D000291 ORTHO05D008053 3.8e-08 62.0 38 71.1
Prupe.3G210200 Prunus persica HOM05D000291 ORTHO05D008053 3.8e-08 62.0 38 71.1
QL08p030694 Quercus lobata HOM05D000291 ORTHO05D008053 3.8e-08 62.0 57 52.6
ClCG09G011220 Citrullus lanatus HOM05D000291 ORTHO05D008053 4.9e-08 61.6 38 68.4
MELO3C014433.2 Cucumis melo HOM05D000291 ORTHO05D008053 4.9e-08 61.6 38 68.4
CsaV3_6G037730 Cucumis sativus L. HOM05D000291 ORTHO05D008053 4.9e-08 61.6 38 68.4
Migut.H01243 Erythranthe guttata HOM05D000291 ORTHO05D008053 4.9e-08 61.6 39 66.7
Migut.O00959 Erythranthe guttata HOM05D000291 ORTHO05D008053 4.9e-08 61.6 39 66.7
Gohir.D07G088700 Gossypium hirsutum HOM05D000291 ORTHO05D008053 4.9e-08 61.6 39 69.2
Gorai.001G095100 Gossypium raimondii HOM05D000291 ORTHO05D008053 4.9e-08 61.6 39 69.2
Medtr3g080490 Medicago truncatula HOM05D000291 ORTHO05D008053 4.9e-08 61.6 39 66.7
Psat5g111400 Pisum sativum HOM05D000291 ORTHO05D008053 4.9e-08 61.6 39 66.7
TPR.G29035 Trifolium pratense HOM05D000291 ORTHO05D008053 4.9e-08 61.6 39 66.7
Aqoxy1G02919 Aquilegia oxysepala HOM05D000291 ORTHO05D008053 6.4e-08 61.2 50 54.0
BcaB03g13461 Brassica carinata HOM05D000291 ORTHO05D008053 6.4e-08 61.2 39 66.7
CiPaw.03G155200 Carya illinoinensis HOM05D000291 ORTHO05D008053 6.4e-08 61.2 44 61.4
Nitab4.5_0005008g0020 Nicotiana tabacum HOM05D000291 ORTHO05D008053 6.4e-08 61.2 38 71.1
Phvul.006G012900 Phaseolus vulgaris HOM05D000291 ORTHO05D008053 6.4e-08 61.2 38 68.4
VMungo0540G2034 Vigna mungo HOM05D000291 ORTHO05D008053 6.4e-08 61.2 38 68.4
MD17G1106000 Malus domestica HOM05D000291 ORTHO05D008053 8.4e-08 60.8 38 68.4
AUR62016746 Chenopodium quinoa HOM05D000291 ORTHO05D008053 1.1e-07 60.5 49 59.2
DCAR_019743 Daucus carota HOM05D000291 ORTHO05D008053 1.1e-07 60.5 46 60.9
TWI75G0674 Tripterygium wilfordii HOM05D000291 ORTHO05D008053 1.1e-07 60.5 39 64.1
DCAR_012920 Daucus carota HOM05D000291 ORTHO05D008053 1.4e-07 60.1 38 68.4
DCAR_019258 Daucus carota HOM05D000291 ORTHO05D008053 1.4e-07 60.1 47 55.3
Gohir.D11G159800 Gossypium hirsutum HOM05D000291 ORTHO05D008053 1.9e-07 59.7 58 51.7
Gorai.007G170400 Gossypium raimondii HOM05D000291 ORTHO05D008053 1.9e-07 59.7 58 51.7
Sed0010852 Sechium edule HOM05D000291 ORTHO05D008053 1.9e-07 59.7 38 65.8
Potri.002G224500 Populus trichocarpa HOM05D000291 ORTHO05D008053 2.4e-07 59.3 39 64.1
Rhsim04G0050400 Rhododendron simsii HOM05D000291 ORTHO05D008053 2.4e-07 59.3 97 40.2
TAR626G1773 Trochodendron aralioides HOM05D000291 ORTHO05D008053 2.4e-07 59.3 39 64.1
vmacro09361 Vaccinium macrocarpon HOM05D000291 ORTHO05D008053 2.4e-07 59.3 97 40.2
PSO541G0721 Papaver somniferum HOM05D000291 ORTHO05D008053 3.2e-07 58.9 45 55.6
RcHm_v2.0_Chr2g0158041 Rosa chinensis HOM05D000291 ORTHO05D008053 3.2e-07 58.9 38 68.4
Atru.chr6.3255 Acer truncatum HOM05D000291 ORTHO05D008053 4.2e-07 58.5 97 40.2
Ah.01g019320 Amaranthus hybridus HOM05D000291 ORTHO05D008053 4.2e-07 58.5 40 70.0
Aqoxy1G00063 Aquilegia oxysepala HOM05D000291 ORTHO05D008053 4.2e-07 58.5 43 58.1
Cpa.g.sc132.22 Carica papaya HOM05D000291 ORTHO05D008053 4.2e-07 58.5 39 64.1
Aa31LG1G19740 Aethionema arabicum HOM05D000291 ORTHO05D008053 5.5e-07 58.2 39 66.7
AUR62011310 Chenopodium quinoa HOM05D000291 ORTHO05D008053 5.5e-07 58.2 49 57.1
Gohir.A11G153000 Gossypium hirsutum HOM05D000291 ORTHO05D008053 5.5e-07 58.2 58 50.0
SHI10049 Sapria himalayana HOM05D000291 ORTHO05D008053 5.5e-07 58.2 38 65.8
PSO675G7957 Papaver somniferum HOM05D000291 ORTHO05D008053 7.1e-07 57.8 45 53.3
EL10Ac9g21716 Beta vulgaris HOM05D000291 ORTHO05D008053 9.3e-07 57.4 40 67.5
Lj6g0022252 Lotus japonicus HOM05D000291 ORTHO05D008053 9.3e-07 57.4 61 50.8
SGA_v2.0_scaffold70G23383 Striga asiatica HOM05D000291 ORTHO05D008053 9.3e-07 57.4 53 54.7
unitig_85.g27310 Utricularia gibba HOM05D000291 ORTHO05D008053 9.3e-07 57.4 41 61.0
arahy.Tifrunner.gnm1.ann1.0Y36M4 Arachis hypogaea HOM05D000291 ORTHO05D008053 1.2e-06 57.0 38 65.8
Cfa014319 Carpinus fangiana HOM05D000291 ORTHO05D008053 1.2e-06 57.0 47 59.6
Eucgr.K00754 Eucalyptus grandis HOM05D000291 ORTHO05D008053 1.2e-06 57.0 39 61.5
Nn1g03378 Nelumbo nucifera HOM05D000291 ORTHO05D008053 1.2e-06 57.0 39 61.5
SGA_v2.0_scaffold49G18352 Striga asiatica HOM05D000291 ORTHO05D008053 1.2e-06 57.0 49 59.2
Glyma.13G026400 Glycine max HOM05D000291 ORTHO05D008053 2.1e-06 56.2 38 63.2
Potri.014G158600 Populus trichocarpa HOM05D000291 ORTHO05D008053 2.1e-06 56.2 38 63.2
TAR629G1608 Trochodendron aralioides HOM05D000291 ORTHO05D008053 2.1e-06 56.2 60 45.0
arahy.Tifrunner.gnm1.ann1.1I39QM Arachis hypogaea HOM05D000291 ORTHO05D008053 4.6e-06 55.1 38 63.2
MBI10_g00761_MAGBIO Magnolia biondii HOM05D000291 ORTHO05D008053 4.6e-06 55.1 38 63.2


User provided reference genes

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