Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 3.0e-111 405.2 210 100.0
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 7.5e-78 294.3 245 67.3
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 4.9e-77 291.6 283 60.1
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 2.1e-75 286.2 251 64.5
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 3.5e-75 285.4 251 64.5
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 2.5e-73 279.3 278 59.4
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 3.5e-67 258.8 238 62.2
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 1.1e-60 237.3 263 54.4
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 1.4e-60 236.9 281 51.2
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 1.3e-58 230.3 266 52.6
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 2.3e-58 229.6 286 49.7
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 2.3e-58 229.6 286 49.7
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 1.5e-57 226.9 258 51.6
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 2.5e-57 226.1 255 51.8
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 5.6e-57 224.9 262 52.7
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 7.3e-57 224.6 283 49.8
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 1.6e-56 223.4 252 49.6
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 3.6e-56 222.2 249 52.6
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 3.6e-56 222.2 234 55.1
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 1.8e-55 219.9 252 51.2
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 3.1e-55 219.2 250 50.4
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 5.3e-55 218.4 251 51.0
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 9.0e-55 217.6 283 47.3
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 1.2e-54 217.2 277 46.2
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 1.2e-54 217.2 276 48.6
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 2.6e-54 216.1 252 50.4
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 9.9e-54 214.2 251 50.6
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 9.9e-54 214.2 283 47.3
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 9.9e-54 214.2 251 49.8
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 1.7e-53 213.4 258 49.2
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 2.2e-53 213.0 251 49.8
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.9e-53 212.6 256 50.0
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 2.9e-53 212.6 258 49.6
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 4.9e-53 211.8 252 49.6
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 8.4e-53 211.1 248 50.0
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 1.4e-52 210.3 250 49.6
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 1.9e-52 209.9 172 65.1
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 2.4e-52 209.5 277 47.7
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 2.4e-52 209.5 252 48.4
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 3.2e-52 209.1 264 47.3
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 9.3e-52 207.6 261 49.0
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 1.2e-51 207.2 246 48.4
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 1.6e-51 206.8 264 47.3
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 2.1e-51 206.5 253 48.2
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 2.7e-51 206.1 171 62.6
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 2.7e-51 206.1 262 48.9
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 2.7e-51 206.1 262 48.9
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 4.6e-51 205.3 233 50.2
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 1.0e-50 204.1 248 47.2
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 1.7e-50 203.4 248 48.0
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 1.7e-50 203.4 246 49.2
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 3.0e-50 202.6 247 48.2
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 3.0e-50 202.6 276 43.8
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 6.6e-50 201.4 257 50.6
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 8.7e-50 201.1 253 47.0
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 1.1e-49 200.7 248 47.2
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.1e-49 200.7 246 47.2
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 1.9e-49 199.9 253 47.0
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 2.5e-49 199.5 258 47.3
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 2.5e-49 199.5 253 47.0
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 4.3e-49 198.7 248 47.2
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 5.6e-49 198.4 246 47.6
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 7.3e-49 198.0 260 47.7
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 7.3e-49 198.0 262 48.1
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 7.3e-49 198.0 242 47.9
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 9.6e-49 197.6 257 47.1
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 2.1e-48 196.4 269 45.7
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 3.6e-48 195.7 248 46.0
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 4.8e-48 195.3 282 43.6
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 6.2e-48 194.9 260 45.4
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 1.1e-47 194.1 262 45.8
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 1.1e-47 194.1 252 46.0
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 2.4e-47 193.0 231 48.5
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 4.0e-47 192.2 248 45.2
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 5.3e-47 191.8 282 42.6
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 5.3e-47 191.8 261 47.1
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 9.0e-47 191.0 249 45.4
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 1.2e-46 190.7 281 42.3
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 1.5e-46 190.3 260 47.3
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 3.4e-46 189.1 255 44.3
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 4.5e-46 188.7 263 43.3
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 4.5e-46 188.7 263 43.3
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 7.6e-46 188.0 164 61.6
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 1.3e-45 187.2 280 42.5
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 1.7e-45 186.8 170 62.4
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 2.2e-45 186.4 249 44.2
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 2.2e-45 186.4 231 47.2
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.9e-45 186.0 279 44.4
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 8.4e-45 184.5 313 41.2
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 5.4e-44 181.8 247 42.9
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 9.3e-44 181.0 244 45.9
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 5.1e-42 175.3 225 49.3
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.1e-41 174.1 225 49.8
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 1.4e-39 167.2 220 48.2
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 1.8e-39 166.8 207 49.3
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 3.1e-39 166.0 168 51.8
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 1.2e-38 164.1 225 47.1
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 3.8e-37 159.1 198 49.0
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 3.8e-37 159.1 197 50.8
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-36 157.5 230 45.2
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 2.5e-36 156.4 146 58.9
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 7.1e-36 154.8 262 37.8
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-34 150.6 219 45.2
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 2.3e-34 149.8 248 37.5
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 3.9e-34 149.1 219 45.2
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 8.7e-34 147.9 230 42.6
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 8.7e-34 147.9 246 41.1
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 8.7e-34 147.9 250 36.4
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 3.3e-33 146.0 250 40.8
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 2.6e-30 136.3 149 51.0
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 5.8e-30 135.2 235 38.7
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.9e-29 132.9 136 53.7
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 8.4e-29 131.3 159 45.9
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 2.2e-21 106.7 201 32.3
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 8.5e-21 104.8 206 33.0
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 8.5e-21 104.8 170 39.4
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 3.2e-20 102.8 162 37.0
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 2.7e-19 99.8 168 42.3
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 6.7e-18 95.1 158 36.1
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 2.0e-17 93.6 122 50.0
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 6.9e-15 85.1 198 27.8
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 2.7e-11 73.2 172 29.1


User provided reference genes

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