Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_36085 Corchorus olitorius HOM05D003715 ORTHO05D003958 2.2e-157 558.9 283 100.0
Duzib106G1922 Durio zibethinus HOM05D003715 ORTHO05D003958 1.2e-110 403.7 300 73.3
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 1.0e-109 400.6 299 73.9
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 8.8e-106 387.5 294 70.4
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 2.2e-104 382.9 295 71.9
Gohir.D11G246200 Gossypium hirsutum HOM05D003715 ORTHO05D003958 4.5e-102 375.2 294 69.0
Duzib106G0556 Durio zibethinus HOM05D003715 ORTHO05D003958 2.7e-78 296.2 232 70.7
Duzib128G0041 Durio zibethinus HOM05D003715 ORTHO05D003958 8.6e-77 291.2 288 61.5
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 1.6e-59 233.8 308 48.7
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 6.8e-58 228.4 291 52.2
TWI34G1349 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 4.4e-57 225.7 308 48.4
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 1.7e-56 223.8 307 48.9
Haze_19430 Corylus avellana HOM05D003715 ORTHO05D003958 3.8e-56 222.6 311 48.9
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 4.9e-56 222.2 305 47.5
Actinidia22080 Actinidia chinensis HOM05D003715 ORTHO05D003958 4.6e-54 215.7 312 48.4
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 6.0e-54 215.3 293 49.8
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 7.8e-54 214.9 306 47.7
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 7.8e-54 214.9 306 47.7
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 1.3e-53 214.2 295 47.1
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 3.3e-52 209.5 302 48.0
Dinv37021 Davidia involucrata HOM05D003715 ORTHO05D003958 1.6e-51 207.2 303 47.5
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 1.6e-51 207.2 295 46.8
TWI32G0411 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 1.4e-50 204.1 295 45.8
CiPaw.10G001300 Carya illinoinensis HOM05D003715 ORTHO05D003958 3.1e-50 203.0 312 45.2
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 3.1e-50 203.0 307 46.6
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 2.0e-49 200.3 295 45.4
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 4.4e-49 199.1 292 45.5
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 7.6e-49 198.4 310 46.1
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 9.9e-49 198.0 305 46.6
Ciclev10021362m.g Citrus clementina HOM05D003715 ORTHO05D003958 2.2e-48 196.8 306 46.7
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 2.9e-48 196.4 310 45.5
Actinidia30549 Actinidia chinensis HOM05D003715 ORTHO05D003958 8.4e-48 194.9 266 49.6
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 4.2e-47 192.6 304 42.8
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 7.1e-47 191.8 312 44.2
Dinv14575 Davidia involucrata HOM05D003715 ORTHO05D003958 3.5e-46 189.5 307 45.0
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 2.3e-45 186.8 302 45.7
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.5e-44 184.1 307 41.7
MSTRG.26069 Avicennia marina HOM05D003715 ORTHO05D003958 3.3e-44 183.0 284 43.0
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 3.3e-44 183.0 302 42.1
Hund19231 Selenicereus undatus HOM05D003715 ORTHO05D003958 7.3e-44 181.8 285 39.6
Sc13g0002630 Simmondsia chinensis HOM05D003715 ORTHO05D003958 2.4e-42 176.8 300 39.0
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 3.1e-42 176.4 292 43.8
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 9.0e-42 174.9 298 41.6
Ca_08274_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 1.2e-41 174.5 294 40.1
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 1.5e-41 174.1 294 40.5
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 1.5e-41 174.1 302 40.7
Oeu024502.1 Olea europaea HOM05D003715 ORTHO05D003958 2.6e-41 173.3 292 42.1
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 2.9e-40 169.9 292 38.4
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 2.9e-40 169.9 297 41.4
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 4.9e-40 169.1 302 40.7
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 8.4e-40 168.3 296 39.2
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 1.1e-39 167.9 290 39.7
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 4.2e-39 166.0 291 38.8
Medtr7g085790 Medicago truncatula HOM05D003715 ORTHO05D003958 9.3e-39 164.9 284 41.2
Lalb_Chr22g0359081 Lupinus albus HOM05D003715 ORTHO05D003958 1.2e-38 164.5 294 41.5
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.5e-38 162.9 258 41.1
Sed0002226 Sechium edule HOM05D003715 ORTHO05D003958 3.5e-38 162.9 302 39.1
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 7.9e-38 161.8 287 41.8
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 1.3e-37 161.0 218 44.5
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 1.8e-37 160.6 288 37.8
EL10Ac3g06828 Beta vulgaris HOM05D003715 ORTHO05D003958 5.1e-37 159.1 293 37.9
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 5.1e-37 159.1 241 44.0
Medtr6g029250 Medicago truncatula HOM05D003715 ORTHO05D003958 6.7e-37 158.7 281 40.2
Nitab4.5_0002769g0040 Nicotiana tabacum HOM05D003715 ORTHO05D003958 8.7e-37 158.3 289 43.3
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 1.5e-36 157.5 312 38.5
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 2.5e-36 156.8 292 40.8
Nitab4.5_0000394g0140 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.3e-35 154.5 292 41.4
Prupe.7G006100 Prunus persica HOM05D003715 ORTHO05D003958 1.3e-35 154.5 319 39.5
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 1.6e-35 154.1 290 37.9
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 2.8e-35 153.3 297 37.7
CiPaw.09G002400 Carya illinoinensis HOM05D003715 ORTHO05D003958 3.7e-35 152.9 264 42.0
Cc06_g23060 Coffea canephora HOM05D003715 ORTHO05D003958 3.7e-35 152.9 161 58.4
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 4.8e-35 152.5 291 39.5
TPR.G9142 Trifolium pratense HOM05D003715 ORTHO05D003958 6.2e-35 152.1 288 40.3
FAN23G0877 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.1e-34 151.4 314 39.2
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 1.4e-34 151.0 244 42.2
FvH4_1g28230 Fragaria vesca HOM05D003715 ORTHO05D003958 1.8e-34 150.6 314 38.9
FAN26G1768 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.2e-33 147.9 309 38.8
HanXRQChr14g0438161 Helianthus annuus HOM05D003715 ORTHO05D003958 1.5e-33 147.5 292 39.7
RcHm_v2.0_Chr3g0497011 Rosa chinensis HOM05D003715 ORTHO05D003958 3.4e-33 146.4 321 38.0
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 5.8e-33 145.6 186 48.4
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 5.8e-33 145.6 293 37.9
MD14G1003600 Malus domestica HOM05D003715 ORTHO05D003958 7.6e-33 145.2 321 36.1
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 1.7e-32 144.1 284 36.6
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 2.9e-32 143.3 296 39.2
MD12G1005100 Malus domestica HOM05D003715 ORTHO05D003958 3.8e-32 142.9 317 37.9
arahy.Tifrunner.gnm1.ann1.V3MY1S Arachis hypogaea HOM05D003715 ORTHO05D003958 4.9e-32 142.5 286 35.7
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 4.9e-32 142.5 191 46.1
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 4.9e-32 142.5 287 38.7
FAN28G3019 Fragaria x ananassa HOM05D003715 ORTHO05D003958 6.4e-32 142.1 314 38.5
TAR369G0375 Trochodendron aralioides HOM05D003715 ORTHO05D003958 6.4e-32 142.1 263 41.1
Nn2g12054 Nelumbo nucifera HOM05D003715 ORTHO05D003958 8.4e-32 141.7 300 37.0
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 8.4e-32 141.7 287 38.3
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 1.1e-31 141.4 288 39.6
TAR633G2492 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.9e-31 140.6 301 36.5
Lsat_1_v5_gn_6_37461 Lactuca sativa HOM05D003715 ORTHO05D003958 2.4e-31 140.2 283 36.4
Nitab4.5_0000358g0150 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.2e-30 137.9 283 40.6
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.2e-30 137.9 273 38.1
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 1.6e-30 137.5 287 38.7
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 2.7e-30 136.7 315 35.9
ECA233G0839 Erigeron canadensis HOM05D003715 ORTHO05D003958 6.0e-30 135.6 279 35.5
Sp3g02840 Schrenkiella parvula HOM05D003715 ORTHO05D003958 7.9e-30 135.2 299 37.8
AL3G13760 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 1.0e-29 134.8 292 38.4
AT3G03870 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 1.3e-29 134.4 293 39.2
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 1.8e-29 134.0 290 37.2
vmacro09135 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 6.7e-29 132.1 254 40.2
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 1.5e-28 131.0 185 42.7
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 1.5e-28 131.0 275 40.0
THA.LOC104820776 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 1.9e-28 130.6 309 38.5
BcaNung05741 Brassica carinata HOM05D003715 ORTHO05D003958 3.3e-28 129.8 293 37.2
Carub.0003s0306 Capsella rubella HOM05D003715 ORTHO05D003958 3.3e-28 129.8 293 37.2
Thhalv10021350m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 5.6e-28 129.0 288 38.9
CARHR077990 Cardamine hirsuta HOM05D003715 ORTHO05D003958 7.4e-28 128.6 281 36.7
Nitab4.5_0009367g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 7.4e-28 128.6 269 36.1
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 1.3e-27 127.9 296 35.1
BcaC05g30247 Brassica carinata HOM05D003715 ORTHO05D003958 3.7e-27 126.3 293 36.5
Nn7g35866 Nelumbo nucifera HOM05D003715 ORTHO05D003958 4.8e-27 125.9 296 37.2
Thhalv10014292m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 6.2e-27 125.6 195 45.1
HanXRQChr13g0397871 Helianthus annuus HOM05D003715 ORTHO05D003958 8.2e-27 125.2 289 33.9
AL6G29330 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 3.1e-26 123.2 205 42.0
BcaB01g06399 Brassica carinata HOM05D003715 ORTHO05D003958 5.3e-26 122.5 200 43.0
Carub.0006s1642 Capsella rubella HOM05D003715 ORTHO05D003958 5.3e-26 122.5 191 43.5
AT5G18130 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 6.9e-26 122.1 195 43.6
BolC1t05801H Brassica oleracea HOM05D003715 ORTHO05D003958 3.4e-25 119.8 295 34.9
BcaC05g29901 Brassica carinata HOM05D003715 ORTHO05D003958 4.5e-25 119.4 171 47.4
BolC5t34973H Brassica oleracea HOM05D003715 ORTHO05D003958 4.5e-25 119.4 171 47.4
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 4.5e-25 119.4 164 45.7
Sp6g26180 Schrenkiella parvula HOM05D003715 ORTHO05D003958 7.6e-25 118.6 301 35.9
A02p04750 Brassica napus HOM05D003715 ORTHO05D003958 1.0e-24 118.2 189 43.4
CARHR194940 Cardamine hirsuta HOM05D003715 ORTHO05D003958 1.0e-24 118.2 116 57.8
Actinidia38611 Actinidia chinensis HOM05D003715 ORTHO05D003958 1.7e-24 117.5 267 36.0
Aa31LG11G11470 Aethionema arabicum HOM05D003715 ORTHO05D003958 2.9e-24 116.7 284 33.5
A05p43520 Brassica napus HOM05D003715 ORTHO05D003958 2.9e-24 116.7 293 36.5
BcaB05g23302 Brassica carinata HOM05D003715 ORTHO05D003958 3.8e-24 116.3 200 42.0
BcaB08g36703 Brassica carinata HOM05D003715 ORTHO05D003958 3.8e-24 116.3 172 46.5
Solyc10g080670.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 3.8e-24 116.3 273 38.8
A10p21370 Brassica napus HOM05D003715 ORTHO05D003958 4.9e-24 115.9 172 47.1
C02p09710 Brassica napus HOM05D003715 ORTHO05D003958 4.9e-24 115.9 200 41.5
BolC2t06880H Brassica oleracea HOM05D003715 ORTHO05D003958 8.4e-24 115.2 200 41.0
BraA02t05434Z Brassica rapa HOM05D003715 ORTHO05D003958 8.4e-24 115.2 197 42.6
arahy.Tifrunner.gnm1.ann1.KTU7AY Arachis hypogaea HOM05D003715 ORTHO05D003958 1.1e-23 114.8 290 34.8
C09p58840 Brassica napus HOM05D003715 ORTHO05D003958 1.1e-23 114.8 173 46.8
BraA10t44200Z Brassica rapa HOM05D003715 ORTHO05D003958 1.1e-23 114.8 172 47.1
PGSC0003DMG400023700 Solanum tuberosum HOM05D003715 ORTHO05D003958 1.1e-23 114.8 273 39.2
Eucgr.K01502 Eucalyptus grandis HOM05D003715 ORTHO05D003958 1.4e-23 114.4 299 35.1
HanXRQChr02g0054571 Helianthus annuus HOM05D003715 ORTHO05D003958 1.9e-23 114.0 286 33.6
BcaB01g05177 Brassica carinata HOM05D003715 ORTHO05D003958 2.5e-23 113.6 172 45.9
C03p10110 Brassica napus HOM05D003715 ORTHO05D003958 2.5e-23 113.6 172 45.9
BolC3t13497H Brassica oleracea HOM05D003715 ORTHO05D003958 2.5e-23 113.6 172 45.9
BraA03t10190Z Brassica rapa HOM05D003715 ORTHO05D003958 2.5e-23 113.6 172 45.9
Sopen10g031210 Solanum pennellii HOM05D003715 ORTHO05D003958 2.5e-23 113.6 273 38.1
MBI04_g37012_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.2e-23 113.2 111 55.0
A03p08670 Brassica napus HOM05D003715 ORTHO05D003958 5.5e-23 112.5 202 41.1
BraA05t23092Z Brassica rapa HOM05D003715 ORTHO05D003958 5.5e-23 112.5 288 35.8
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 7.1e-23 112.1 105 54.3
Rhsim04G0091400 Rhododendron simsii HOM05D006013 ORTHO05D007383 2.1e-22 110.5 263 36.5
BolC9t58728H Brassica oleracea HOM05D003715 ORTHO05D003958 2.7e-22 110.2 174 46.0
BcaC03g13579 Brassica carinata HOM05D003715 ORTHO05D003958 4.6e-22 109.4 200 39.5
FAN19G0160 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.3e-21 107.8 287 35.2
BcaC05g30288 Brassica carinata HOM05D003715 ORTHO05D003958 1.8e-21 107.5 89 61.8
CDE02G4343 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 6.7e-21 105.5 247 36.4
SalBow1G3164 Salvia bowleyana HOM05D003715 ORTHO05D003958 1.5e-20 104.4 278 36.3
Ah.04g153150 Amaranthus hybridus HOM05D003715 ORTHO05D003958 4.3e-20 102.8 296 31.1
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 2.8e-19 100.1 207 31.4
THA.LOC104802870 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 4.8e-19 99.4 302 34.4
arahy.Tifrunner.gnm1.ann1.FCYU2S Arachis hypogaea HOM05D003715 ORTHO05D003958 6.3e-19 99.0 158 39.9
Aqoxy1G00472 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 1.4e-18 97.8 293 33.1
CDE05G3048 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 1.4e-18 97.8 246 34.1
Aa31LG5G14450 Aethionema arabicum HOM05D003715 ORTHO05D003958 2.0e-17 94.0 285 30.2
AUR62032043 Chenopodium quinoa HOM05D003715 ORTHO05D003958 2.6e-17 93.6 281 30.6
Lsat_1_v5_gn_2_58261 Lactuca sativa HOM05D003715 ORTHO05D003958 4.2e-15 86.3 246 33.7
Gohir.D11G314650 Gossypium hirsutum HOM05D036646 ORTHO05D047613 9.4e-15 85.1 249 31.7
AUR62032710 Chenopodium quinoa HOM05D003715 ORTHO05D003958 1.6e-14 84.3 281 30.2
Gorai.007G345800 Gossypium raimondii HOM05D036646 ORTHO05D047613 2.1e-14 84.0 246 31.7
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 2.3e-13 80.5 92 45.7
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 3.9e-13 79.7 67 58.2
PSO384G3057 Papaver somniferum HOM05D003715 ORTHO05D003958 5.1e-13 79.3 145 37.9
Peaxi162Scf00249g00717 Petunia axillaris HOM05D003715 ORTHO05D003958 8.8e-13 78.6 269 31.2
Os07g0204100 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 1.1e-12 78.2 91 54.9
arahy.Tifrunner.gnm1.ann1.85Z4HY Arachis hypogaea HOM05D003715 ORTHO05D003958 2.5e-12 77.0 288 27.8
PSO782G0808 Papaver somniferum HOM05D003715 ORTHO05D003958 1.7e-11 74.3 131 39.7
HPP92_014229 Vanilla planifolia HOM05D035551 ORTHO05D003958 1.7e-11 74.3 164 36.6
THA.LOC104827275 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 9.1e-10 68.6 149 42.3
SEGI_20586 Sequoiadendron giganteum HOM05D003715 ORTHO05D003958 1.2e-09 68.2 102 40.2
VMungo1164G0001 Vigna mungo HOM05D003715 ORTHO05D003958 1.2e-06 58.2 67 53.7


User provided reference genes

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