Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_35737 Corchorus olitorius HOM05D006783 ORTHO05D008330 1.2e-239 832.8 431 100.0
Thecc.01G131600 Theobroma cacao HOM05D006783 ORTHO05D008330 2.3e-182 642.5 431 76.1
Duzib264G0694 Durio zibethinus HOM05D006783 ORTHO05D008330 1.6e-175 619.8 431 78.7
Gohir.A05G385200 Gossypium hirsutum HOM05D006783 ORTHO05D008330 1.7e-156 556.6 431 69.4
Gorai.012G034600 Gossypium raimondii HOM05D006783 ORTHO05D008330 1.9e-147 526.6 428 68.5
Gohir.D04G022400 Gossypium hirsutum HOM05D006783 ORTHO05D008330 4.0e-142 508.8 428 67.8
Haze_25231 Corylus avellana HOM05D006783 ORTHO05D008330 1.3e-121 440.7 432 56.0
Atru.chr4.894 Acer truncatum HOM05D006783 ORTHO05D008330 4.3e-120 435.6 443 53.3
Ciclev10000624m.g Citrus clementina HOM05D006783 ORTHO05D008330 1.1e-118 431.0 442 52.3
QL10p043377 Quercus lobata HOM05D006783 ORTHO05D008330 2.0e-117 426.8 429 53.4
CiPaw.03G122200 Carya illinoinensis HOM05D006783 ORTHO05D008330 4.6e-114 415.6 429 52.4
Dinv24358 Davidia involucrata HOM05D006783 ORTHO05D008330 4.6e-114 415.6 431 53.6
Manes.12G155400 Manihot esculenta HOM05D006783 ORTHO05D008330 7.8e-114 414.8 429 53.1
TWI79G1521 Tripterygium wilfordii HOM05D006783 ORTHO05D008330 3.3e-112 409.5 431 50.8
Sabra07G0087300 Salix brachista HOM05D006783 ORTHO05D008330 3.6e-111 406.0 430 52.8
Potri.007G106700 Populus trichocarpa HOM05D006783 ORTHO05D008330 8.1e-111 404.8 431 52.7
Cpa.g.sc42.156 Carica papaya HOM05D006783 ORTHO05D008330 2.6e-109 399.8 430 50.5
Rhsim10G0135000 Rhododendron simsii HOM05D006783 ORTHO05D008330 4.5e-109 399.1 434 52.5
Hma1.2p1_0050F.1_g029140 Hydrangea macrophylla HOM05D006783 ORTHO05D008330 8.4e-108 394.8 431 50.3
FAN19G0409 Fragaria x ananassa HOM05D006783 ORTHO05D008330 1.4e-107 394.0 429 50.8
FvH4_1g24320 Fragaria vesca HOM05D006783 ORTHO05D008330 5.4e-107 392.1 430 50.9
RcHm_v2.0_Chr2g0120831 Rosa chinensis HOM05D006783 ORTHO05D008330 1.2e-106 391.0 435 51.5
Actinidia06622 Actinidia chinensis HOM05D006783 ORTHO05D008330 2.1e-106 390.2 432 50.5
Lj4A842G81 Lonicera japonica HOM05D006783 ORTHO05D008330 1.0e-105 387.9 435 51.0
FAN26G1994 Fragaria x ananassa HOM05D006783 ORTHO05D008330 8.7e-105 384.8 429 50.1
vmacro12805 Vaccinium macrocarpon HOM05D006783 ORTHO05D008330 1.5e-104 384.0 434 49.5
DCAR_020443 Daucus carota HOM05D006783 ORTHO05D008330 2.6e-101 373.2 437 48.5
Dinv07124 Davidia involucrata HOM05D006783 ORTHO05D008330 2.2e-100 370.2 431 47.8
TAR381G1481 Trochodendron aralioides HOM05D006783 ORTHO05D008330 1.9e-99 367.1 438 49.1
Cc07_g18470 Coffea canephora HOM05D006783 ORTHO05D008330 2.1e-98 363.6 431 47.6
PSO017G1517 Papaver somniferum HOM05D006783 ORTHO05D008330 1.0e-97 361.3 435 48.3
EL10Ac6g15310 Beta vulgaris HOM05D006783 ORTHO05D008330 3.0e-97 359.8 431 47.8
PSO170G6811 Papaver somniferum HOM05D006783 ORTHO05D008330 3.0e-97 359.8 435 49.0
Eucgr.H04963 Eucalyptus grandis HOM05D006783 ORTHO05D008330 1.9e-96 357.1 426 46.2
AL1G31600 Arabidopsis lyrata HOM05D006783 ORTHO05D008330 1.6e-95 354.0 438 46.1
Lj1g0010780 Lotus japonicus HOM05D006783 ORTHO05D008330 2.1e-95 353.6 436 47.0
Thhalv10007278m.g Eutrema salsugineum HOM05D006783 ORTHO05D008330 1.4e-94 350.9 446 45.5
Oeu004243.1 Olea europaea HOM05D006783 ORTHO05D008330 1.8e-94 350.5 432 47.9
GSVIVG01026486001 Vitis vinifera HOM05D006783 ORTHO05D008330 2.4e-94 350.1 430 44.9
Sp1g16990 Schrenkiella parvula HOM05D006783 ORTHO05D008330 3.1e-94 349.7 436 45.6
AUR62003560 Chenopodium quinoa HOM05D006783 ORTHO05D008330 4.0e-94 349.4 474 48.3
Sed0010062 Sechium edule HOM05D006783 ORTHO05D008330 5.3e-94 349.0 461 43.8
Lalb_Chr11g0068431 Lupinus albus HOM05D006783 ORTHO05D008330 6.9e-94 348.6 434 45.9
ClCG02G000310 Citrullus lanatus HOM05D006783 ORTHO05D008330 9.0e-94 348.2 460 45.9
Peaxi162Scf00183g00220 Petunia axillaris HOM05D006783 ORTHO05D008330 9.0e-94 348.2 436 45.6
CANSAT01G2909 Cannabis sativa HOM05D006783 ORTHO05D008330 7.6e-93 345.1 429 50.1
Carub.0001s1866 Capsella rubella HOM05D006783 ORTHO05D008330 1.3e-92 344.4 439 46.0
BolC8t51838H Brassica oleracea HOM05D006783 ORTHO05D008330 2.9e-92 343.2 437 45.3
AT1G19025 Arabidopsis thaliana HOM05D006783 ORTHO05D008330 3.8e-92 342.8 439 45.6
Migut.H00705 Erythranthe guttata HOM05D006783 ORTHO05D008330 1.1e-91 341.3 433 46.7
THA.LOC104808567 Tarenaya hassleriana HOM05D006783 ORTHO05D008330 1.4e-91 340.9 438 45.9
AUR62017874 Chenopodium quinoa HOM05D006783 ORTHO05D008330 5.5e-91 339.0 479 47.4
A09p59540 Brassica napus HOM05D006783 ORTHO05D008330 9.3e-91 338.2 441 44.9
BraA09t41331Z Brassica rapa HOM05D006783 ORTHO05D008330 1.2e-90 337.8 441 44.9
Nitab4.5_0000856g0080 Nicotiana tabacum HOM05D006783 ORTHO05D008330 1.6e-90 337.4 436 46.3
TPR.G20746 Trifolium pratense HOM05D006783 ORTHO05D008330 3.5e-90 336.3 428 45.6
arahy.Tifrunner.gnm1.ann1.GA3CQQ Arachis hypogaea HOM05D006783 ORTHO05D008330 4.6e-90 335.9 461 47.1
BcaC07g41275 Brassica carinata HOM05D006783 ORTHO05D008330 4.6e-90 335.9 437 44.9
C08p42820 Brassica napus HOM05D006783 ORTHO05D008330 4.6e-90 335.9 437 44.9
Hund25583 Selenicereus undatus HOM05D006783 ORTHO05D008330 6.1e-90 335.5 432 46.1
Medtr3g096240 Medicago truncatula HOM05D006783 ORTHO05D008330 1.8e-89 334.0 430 44.9
Glyma.06G153300 Glycine max HOM05D006783 ORTHO05D008330 2.3e-89 333.6 430 45.3
Sopen11g001950 Solanum pennellii HOM05D006783 ORTHO05D008330 2.3e-89 333.6 436 44.0
BcaB03g14467 Brassica carinata HOM05D006783 ORTHO05D008330 3.9e-89 332.8 436 43.8
Solyc11g006010.3 Solanum lycopersicum HOM05D006783 ORTHO05D008330 5.1e-89 332.4 440 43.9
Aqoxy5G02235 Aquilegia oxysepala HOM05D006783 ORTHO05D008330 8.7e-89 331.6 444 44.6
arahy.Tifrunner.gnm1.ann1.NV8W9T Arachis hypogaea HOM05D006783 ORTHO05D008330 8.7e-89 331.6 461 46.6
Lsat_1_v5_gn_2_37361 Lactuca sativa HOM05D006783 ORTHO05D008330 1.9e-88 330.5 429 44.5
Nitab4.5_0008132g0010 Nicotiana tabacum HOM05D006783 ORTHO05D008330 3.3e-88 329.7 436 45.6
Ah.03g147820 Amaranthus hybridus HOM05D006783 ORTHO05D008330 4.3e-88 329.3 439 44.4
MSTRG.2651 Avicennia marina HOM05D006783 ORTHO05D008330 7.4e-88 328.6 424 45.3
CARHR019650 Cardamine hirsuta HOM05D006783 ORTHO05D008330 1.3e-87 327.8 435 43.9
HanXRQChr06g0180641 Helianthus annuus HOM05D006783 ORTHO05D008330 4.8e-87 325.9 429 46.2
Ca_16945_v3 Cicer arietinum L. HOM05D006783 ORTHO05D008330 1.4e-86 324.3 325 52.0
Ca_16964_v3 Cicer arietinum L. HOM05D006783 ORTHO05D008330 1.4e-86 324.3 325 52.0
CAN.G582.7 Capsicum annuum HOM05D006783 ORTHO05D008330 5.3e-86 322.4 438 44.1
CsaV3_2G019520 Cucumis sativus L. HOM05D006783 ORTHO05D008330 5.3e-86 322.4 454 42.7
Nn5g28554 Nelumbo nucifera HOM05D006783 ORTHO05D008330 2.6e-85 320.1 298 56.7
ECA246G4425 Erigeron canadensis HOM05D006783 ORTHO05D008330 2.5e-83 313.5 433 42.7
Psat5g062360 Pisum sativum HOM05D006783 ORTHO05D008330 1.6e-82 310.8 432 43.8
Aa31LG7G3800 Aethionema arabicum HOM05D006783 ORTHO05D008330 2.3e-81 307.0 284 56.0
MELO3C023221.2 Cucumis melo HOM05D006783 ORTHO05D008330 2.0e-80 303.9 457 41.8
BcaB03g12941 Brassica carinata HOM05D006783 ORTHO05D008330 1.4e-73 281.2 410 42.4
CDE06G2516 Ceratophyllum demersum HOM05D006783 ORTHO05D008330 3.7e-71 273.1 426 40.1
SHI11470 Sapria himalayana HOM05D006783 ORTHO05D008330 1.8e-70 270.8 433 38.6
Os08g0107600 Oryza sativa ssp. japonica HOM05D006783 ORTHO05D008330 1.0e-68 265.0 510 36.9
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 1.7e-68 264.2 312 48.1
Zm00001eb174320 Zea mays HOM05D006783 ORTHO05D008330 2.9e-68 263.5 482 38.6
ATR1136G115 Amborella trichopoda HOM05D006783 ORTHO05D008330 2.3e-65 253.8 460 37.4
SEGI_38469 Sequoiadendron giganteum HOM05D006783 ORTHO05D008330 4.8e-63 246.1 478 37.9
Zm00001eb145740 Zea mays HOM05D006783 ORTHO05D008330 1.4e-62 244.6 451 37.3
MBI06_g29674_MAGBIO Magnolia biondii HOM05D006783 ORTHO05D008330 3.1e-62 243.4 182 63.7
Os01g0881400 Oryza sativa ssp. japonica HOM05D006783 ORTHO05D008330 4.5e-61 239.6 523 33.1
unitig_0.g1207 Utricularia gibba HOM05D006783 ORTHO05D008330 8.5e-60 235.3 446 37.7
Psat7g194880 Pisum sativum HOM05D006783 ORTHO05D008330 1.9e-51 207.6 211 52.6
Zm00001eb290170 Zea mays HOM05D006783 ORTHO05D008330 4.2e-43 179.9 186 51.6
TAR381G0047 Trochodendron aralioides HOM05D006783 ORTHO05D008330 2.9e-36 157.1 120 65.0
HPP92_013423 Vanilla planifolia HOM05D006783 ORTHO05D008330 1.6e-34 151.4 189 46.0
Pp3c17_21070 Physcomitrium patens HOM05D006783 ORTHO05D008330 5.2e-33 146.4 307 31.6
Zm00001eb092970 Zea mays HOM05D006783 ORTHO05D008330 4.6e-29 133.3 413 32.2
Psat0s4692g0040 Pisum sativum HOM05D006783 ORTHO05D008330 3.0e-28 130.6 103 58.3
TAR381G1530 Trochodendron aralioides HOM05D006783 ORTHO05D008330 1.9e-27 127.9 162 47.5
Psat3g153680 Pisum sativum HOM05D006783 ORTHO05D008330 9.5e-27 125.6 103 55.3
TAR371G1287 Trochodendron aralioides HOM05D006783 ORTHO05D008330 4.1e-22 110.2 79 64.6
CBR_g9109 Chara braunii HOM05D006783 ORTHO05D008330 3.4e-16 90.5 235 28.1
Zm00001eb286580 Zea mays HOM05D006783 ORTHO05D008330 6.2e-10 69.7 82 50.0


User provided reference genes

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