Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 3.0e-76 288.5 150 100.0
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 1.3e-52 209.9 162 69.8
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.7e-52 209.5 162 71.0
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 3.9e-52 208.4 162 70.4
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 7.3e-51 204.1 165 69.7
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 1.3e-47 193.4 127 78.7
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 2.9e-47 192.2 126 79.4
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 1.4e-46 189.9 127 77.2
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 9.3e-46 187.2 149 69.1
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 1.2e-45 186.8 129 73.6
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.7e-45 185.7 129 72.9
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 6.0e-45 184.5 127 74.0
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 6.0e-45 184.5 125 76.0
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 7.8e-45 184.1 164 63.4
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 7.8e-45 184.1 129 72.1
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 1.7e-44 183.0 132 71.2
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.7e-44 183.0 125 74.4
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 1.7e-44 183.0 122 74.6
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 1.7e-44 183.0 137 70.8
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 3.0e-44 182.2 148 68.2
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 6.6e-44 181.0 162 61.1
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 6.6e-44 181.0 125 75.2
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 6.6e-44 181.0 149 67.8
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 8.7e-44 180.6 161 63.4
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 1.5e-43 179.9 126 73.0
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 3.3e-43 178.7 126 73.0
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 3.3e-43 178.7 126 73.0
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 5.6e-43 177.9 122 73.0
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 5.6e-43 177.9 143 67.8
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 9.6e-43 177.2 122 73.0
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 1.3e-42 176.8 129 72.9
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 1.3e-42 176.8 164 62.8
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 1.6e-42 176.4 157 62.4
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 2.1e-42 176.0 130 68.5
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 3.6e-42 175.3 162 64.2
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 4.8e-42 174.9 113 75.2
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 6.2e-42 174.5 130 70.8
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 6.2e-42 174.5 127 70.9
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 8.1e-42 174.1 141 63.1
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 8.1e-42 174.1 135 70.4
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 8.1e-42 174.1 135 70.4
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 8.1e-42 174.1 135 70.4
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 8.1e-42 174.1 124 71.8
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 1.1e-41 173.7 135 70.4
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 1.1e-41 173.7 135 70.4
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.4e-41 173.3 166 58.4
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 2.4e-41 172.6 156 66.7
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 3.1e-41 172.2 118 72.0
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 4.0e-41 171.8 141 61.0
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 5.3e-41 171.4 164 62.2
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 2.0e-40 169.5 127 69.3
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 4.5e-40 168.3 145 66.2
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 5.8e-40 167.9 145 66.2
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 7.6e-40 167.5 118 72.9
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 7.6e-40 167.5 149 63.1
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 1.3e-39 166.8 161 62.7
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 1.3e-39 166.8 122 68.9
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 1.7e-39 166.4 123 69.9
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 1.7e-39 166.4 118 72.9
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 2.2e-39 166.0 122 68.9
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 2.9e-39 165.6 132 64.4
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 4.9e-39 164.9 115 72.2
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 4.9e-39 164.9 129 65.9
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 4.9e-39 164.9 129 67.4
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 8.4e-39 164.1 100 76.0
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 1.2e-37 160.2 121 66.9
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 3.5e-37 158.7 121 71.1
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 3.5e-37 158.7 121 71.1
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 4.6e-37 158.3 122 66.4
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 6.0e-37 157.9 123 66.7
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.0e-36 157.1 121 63.6
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 2.3e-36 156.0 121 66.1
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 5.1e-36 154.8 137 65.7
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 5.1e-36 154.8 114 67.5
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 1.1e-35 153.7 150 60.7
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 3.3e-35 152.1 125 63.2
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 9.6e-35 150.6 152 53.9
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.5e-32 143.3 128 59.4
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 2.0e-32 142.9 123 67.5
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 3.4e-32 142.1 97 70.1
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 4.9e-31 138.3 114 64.9
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 6.4e-31 137.9 105 70.5
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 1.4e-30 136.7 132 61.4
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 2.4e-30 136.0 102 70.6
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 5.1e-28 128.3 98 69.4
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 8.7e-28 127.5 98 70.4
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 1.1e-27 127.1 93 74.2
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 2.1e-26 122.9 92 71.7
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 8.2e-26 120.9 142 48.6
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 4.0e-25 118.6 92 69.6
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 2.6e-24 115.9 133 48.9
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 7.6e-24 114.4 127 48.8
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 1.7e-23 113.2 71 66.2
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 4.9e-23 111.7 120 55.8
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 4.6e-21 105.1 119 46.2
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 7.9e-21 104.4 158 44.9
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 5.1e-20 101.7 130 47.7
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 9.7e-19 97.4 115 45.2
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 7.6e-16 87.8 117 39.3
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 1.3e-15 87.0 117 39.3
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 1.7e-15 86.7 124 38.7
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.1e-14 84.0 116 46.6
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 2.3e-12 76.3 70 58.6
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 8.2e-10 67.8 113 41.6
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 2.6e-08 62.8 123 38.2
FAN16G2470 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.5e-06 56.2 52 67.3
Actinidia24129 Actinidia chinensis HOM05D000070 ORTHO05D001255 7.2e-06 54.7 69 53.6


User provided reference genes

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