Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_34077 Corchorus olitorius HOM05D004941 ORTHO05D005624 1.7e-38 162.2 82 100.0
COL.COLO4_34078 Corchorus olitorius HOM05D004941 ORTHO05D005624 3.4e-34 147.9 93 84.9
Duzib212G1033 Durio zibethinus HOM05D004941 ORTHO05D005624 4.4e-34 147.5 93 83.9
Thecc.04G211200 Theobroma cacao HOM05D004941 ORTHO05D005624 4.4e-34 147.5 93 83.9
Duzib212G0897 Durio zibethinus HOM05D004941 ORTHO05D005624 4.9e-33 144.1 93 81.7
Eucgr.H00092 Eucalyptus grandis HOM05D004941 ORTHO05D005624 8.4e-33 143.3 93 81.7
Prupe.1G061100 Prunus persica HOM05D004941 ORTHO05D005624 8.4e-33 143.3 93 81.7
arahy.Tifrunner.gnm1.ann1.4W8SKF Arachis hypogaea HOM05D004941 ORTHO05D005624 1.1e-32 142.9 93 80.6
Gohir.D09G052984 Gossypium hirsutum HOM05D004941 ORTHO05D005624 1.1e-32 142.9 93 80.6
PGR142G1301 Punica granatum HOM05D004941 ORTHO05D005624 1.1e-32 142.9 93 80.6
CANSAT78G1419 Cannabis sativa HOM05D004941 ORTHO05D005624 1.4e-32 142.5 93 79.6
Cpa.g.c36552 Carica papaya HOM05D004941 ORTHO05D005624 1.4e-32 142.5 93 79.6
CiPaw.01G126200 Carya illinoinensis HOM05D004941 ORTHO05D005624 1.4e-32 142.5 93 80.6
Manes.15G050400 Manihot esculenta HOM05D004941 ORTHO05D005624 1.4e-32 142.5 93 80.6
TWI73G0643 Tripterygium wilfordii HOM05D004941 ORTHO05D005624 1.4e-32 142.5 93 80.6
Haze_11557 Corylus avellana HOM05D004941 ORTHO05D005624 1.9e-32 142.1 93 80.6
Duzib151G0226 Durio zibethinus HOM05D004941 ORTHO05D005624 1.9e-32 142.1 93 81.7
Potri.001G052100 Populus trichocarpa HOM05D004941 ORTHO05D005624 1.9e-32 142.1 93 80.6
Manes.03G152200 Manihot esculenta HOM05D004941 ORTHO05D005624 2.4e-32 141.7 91 81.3
PGR083G0368 Punica granatum HOM05D004941 ORTHO05D005624 2.4e-32 141.7 93 80.6
MELO3C006336.2 Cucumis melo HOM05D004941 ORTHO05D005624 3.2e-32 141.4 93 79.6
CsaV3_3G011260 Cucumis sativus L. HOM05D004941 ORTHO05D005624 3.2e-32 141.4 93 79.6
FvH4_4g05880 Fragaria vesca HOM05D004941 ORTHO05D005624 3.2e-32 141.4 93 80.6
FAN12G1018 Fragaria x ananassa HOM05D004941 ORTHO05D005624 3.2e-32 141.4 93 80.6
FAN22G1917 Fragaria x ananassa HOM05D004941 ORTHO05D005624 3.2e-32 141.4 93 80.6
Sabra01G0036700 Salix brachista HOM05D004941 ORTHO05D005624 3.2e-32 141.4 93 79.6
TPR.G10093 Trifolium pratense HOM05D004941 ORTHO05D005624 4.2e-32 141.0 93 79.6
Gorai.006G055700 Gossypium raimondii HOM05D004941 ORTHO05D005624 5.4e-32 140.6 91 80.2
MD16G1235900 Malus domestica HOM05D004941 ORTHO05D005624 5.4e-32 140.6 93 78.5
Phvul.007G236700 Phaseolus vulgaris HOM05D004941 ORTHO05D005624 5.4e-32 140.6 93 79.6
Cfa021915 Carpinus fangiana HOM05D004941 ORTHO05D005624 7.1e-32 140.2 93 79.6
ClCG05G003570 Citrullus lanatus HOM05D004941 ORTHO05D005624 7.1e-32 140.2 93 78.5
GSVIVG01029054001 Vitis vinifera HOM05D004941 ORTHO05D005624 7.1e-32 140.2 93 78.5
Gohir.A09G052900 Gossypium hirsutum HOM05D004941 ORTHO05D005624 9.3e-32 139.8 93 79.6
SGA_v2.0_scaffold57G20152 Striga asiatica HOM05D004941 ORTHO05D005624 9.3e-32 139.8 93 78.5
Atru.chr4.1786 Acer truncatum HOM05D004941 ORTHO05D005624 1.2e-31 139.4 93 77.4
QL06p023335 Quercus lobata HOM05D004941 ORTHO05D005624 1.2e-31 139.4 92 79.3
Psat6g047760 Pisum sativum HOM05D004941 ORTHO05D005624 1.6e-31 139.0 93 78.5
VMungo0720G0486 Vigna mungo HOM05D004941 ORTHO05D005624 1.6e-31 139.0 93 78.5
FAN07G0685 Fragaria x ananassa HOM05D004941 ORTHO05D005624 2.7e-31 138.3 93 79.6
Oeu006717.1 Olea europaea HOM05D004941 ORTHO05D005624 2.7e-31 138.3 92 78.3
Glyma.20G077200 Glycine max HOM05D004941 ORTHO05D005624 3.5e-31 137.9 93 77.4
Oeu022332.1 Olea europaea HOM05D004941 ORTHO05D005624 3.5e-31 137.9 93 76.3
Sed0000115 Sechium edule HOM05D004941 ORTHO05D005624 3.5e-31 137.9 93 77.4
vmacro15503 Vaccinium macrocarpon HOM05D004941 ORTHO05D005624 3.5e-31 137.9 93 77.4
FAN17G1669 Fragaria x ananassa HOM05D004941 ORTHO05D005624 4.6e-31 137.5 93 79.6
Glyma.10G124800 Glycine max HOM05D004941 ORTHO05D005624 4.6e-31 137.5 93 77.4
Lj6g0004918 Lotus japonicus HOM05D004941 ORTHO05D005624 4.6e-31 137.5 93 79.6
RcHm_v2.0_Chr4g0396981 Rosa chinensis HOM05D004941 ORTHO05D005624 4.6e-31 137.5 93 77.4
TAR636G2508 Trochodendron aralioides HOM05D004941 ORTHO05D005624 4.6e-31 137.5 93 77.4
Nn1g03138 Nelumbo nucifera HOM05D004941 ORTHO05D005624 6.0e-31 137.1 93 77.4
THA.LOC104826109 Tarenaya hassleriana HOM05D004941 ORTHO05D005624 7.8e-31 136.7 93 75.3
MSTRG.4206 Avicennia marina HOM05D004941 ORTHO05D005624 1.0e-30 136.3 93 76.3
Actinidia34635 Actinidia chinensis HOM05D004941 ORTHO05D005624 1.3e-30 136.0 91 76.9
SalBow2G0113 Salvia bowleyana HOM05D004941 ORTHO05D005624 1.7e-30 135.6 93 75.3
TWI09G1152 Tripterygium wilfordii HOM05D004941 ORTHO05D005624 1.7e-30 135.6 91 78.0
SGA_v2.0_scaffold155G37216 Striga asiatica HOM05D004941 ORTHO05D005624 2.3e-30 135.2 93 76.3
CAN.G706.24 Capsicum annuum HOM05D004941 ORTHO05D005624 3.0e-30 134.8 93 76.3
CSS0021875 Camellia sinensis var. sinensis HOM05D004941 ORTHO05D005624 3.9e-30 134.4 93 76.3
Lalb_Chr01g0010801 Lupinus albus HOM05D004941 ORTHO05D005624 3.9e-30 134.4 93 76.3
Solyc12g098150.2 Solanum lycopersicum HOM05D004941 ORTHO05D005624 3.9e-30 134.4 93 75.3
Sopen12g032980 Solanum pennellii HOM05D004941 ORTHO05D005624 3.9e-30 134.4 93 75.3
PGSC0003DMG400016870 Solanum tuberosum HOM05D004941 ORTHO05D005624 3.9e-30 134.4 93 75.3
CiPaw.02G068500 Carya illinoinensis HOM05D004941 ORTHO05D005624 6.6e-30 133.7 91 76.9
Nn3g19897 Nelumbo nucifera HOM05D004941 ORTHO05D005624 6.6e-30 133.7 93 75.3
Actinidia35949 Actinidia chinensis HOM05D004941 ORTHO05D005624 8.7e-30 133.3 93 74.2
Peaxi162Scf00817g00217 Petunia axillaris HOM05D004941 ORTHO05D005624 8.7e-30 133.3 93 74.2
THA.LOC104801049 Tarenaya hassleriana HOM05D004941 ORTHO05D005624 1.1e-29 132.9 93 74.2
Aa31LG1G20190 Aethionema arabicum HOM05D004941 ORTHO05D005624 1.5e-29 132.5 93 73.1
MSTRG.9834 Avicennia marina HOM05D004941 ORTHO05D005624 1.5e-29 132.5 93 74.2
A10p03120 Brassica napus HOM05D004941 ORTHO05D005624 1.9e-29 132.1 93 74.2
C05p02890 Brassica napus HOM05D004941 ORTHO05D005624 1.9e-29 132.1 93 74.2
BolC5t29070H Brassica oleracea HOM05D004941 ORTHO05D005624 1.9e-29 132.1 93 74.2
BraA10t42585Z Brassica rapa HOM05D004941 ORTHO05D005624 1.9e-29 132.1 93 74.2
Migut.G00623 Erythranthe guttata HOM05D004941 ORTHO05D005624 1.9e-29 132.1 93 74.2
Medtr1g047250 Medicago truncatula HOM05D004941 ORTHO05D005624 1.9e-29 132.1 93 75.3
AL1G14400 Arabidopsis lyrata HOM05D004941 ORTHO05D005624 2.5e-29 131.7 93 73.1
AT1G04690 Arabidopsis thaliana HOM05D004941 ORTHO05D005624 3.3e-29 131.3 93 73.1
CARHR004070 Cardamine hirsuta HOM05D004941 ORTHO05D005624 3.3e-29 131.3 93 72.0
BcaC07g36888 Brassica carinata HOM05D004941 ORTHO05D005624 4.3e-29 131.0 93 73.1
A08p36750 Brassica napus HOM05D004941 ORTHO05D005624 4.3e-29 131.0 93 73.1
C08p01390 Brassica napus HOM05D004941 ORTHO05D005624 4.3e-29 131.0 93 73.1
BolC8t46947H Brassica oleracea HOM05D004941 ORTHO05D005624 4.3e-29 131.0 93 73.1
BraA08t35577Z Brassica rapa HOM05D004941 ORTHO05D005624 4.3e-29 131.0 93 73.1
Ciclev10005408m.g Citrus clementina HOM05D004941 ORTHO05D005624 4.3e-29 131.0 93 74.2
Thhalv10008181m.g Eutrema salsugineum HOM05D004941 ORTHO05D005624 4.3e-29 131.0 93 73.1
Lsat_1_v5_gn_1_72461 Lactuca sativa HOM05D004941 ORTHO05D005624 4.3e-29 131.0 93 75.3
Lj6C612G1 Lonicera japonica HOM05D004941 ORTHO05D005624 4.3e-29 131.0 93 73.1
MD13G1231200 Malus domestica HOM05D004941 ORTHO05D005624 4.3e-29 131.0 93 75.3
Sp1g03530 Schrenkiella parvula HOM05D004941 ORTHO05D005624 4.3e-29 131.0 93 73.1
TAR365G1102 Trochodendron aralioides HOM05D004941 ORTHO05D005624 4.3e-29 131.0 92 73.9
ATR0787G155 Amborella trichopoda HOM05D004941 ORTHO05D005624 5.6e-29 130.6 93 74.2
Carub.0001s0394 Capsella rubella HOM05D004941 ORTHO05D005624 5.6e-29 130.6 93 72.0
Ah.12g061340 Amaranthus hybridus HOM05D004941 ORTHO05D005624 9.6e-29 129.8 93 73.1
EL10Ac2g02402 Beta vulgaris HOM05D004941 ORTHO05D005624 1.3e-28 129.4 93 71.0
Lalb_Chr03g0036651 Lupinus albus HOM05D004941 ORTHO05D005624 1.3e-28 129.4 93 74.2
CDE06G1864 Ceratophyllum demersum HOM05D004941 ORTHO05D005624 1.6e-28 129.0 93 71.0
Dinv29557 Davidia involucrata HOM05D004941 ORTHO05D005624 1.6e-28 129.0 93 69.9
MBI07_g19562_MAGBIO Magnolia biondii HOM05D004941 ORTHO05D005624 1.6e-28 129.0 93 73.1
DCAR_024319 Daucus carota HOM05D004941 ORTHO05D005624 2.1e-28 128.6 93 72.0
Dinv38278 Davidia involucrata HOM05D004941 ORTHO05D005624 2.1e-28 128.6 93 71.0
Lj3A584G54 Lonicera japonica HOM05D004941 ORTHO05D005624 2.1e-28 128.6 93 71.0
BcaB03g13476 Brassica carinata HOM05D004941 ORTHO05D005624 4.8e-28 127.5 91 71.4
AUR62020272 Chenopodium quinoa HOM05D004941 ORTHO05D005624 4.8e-28 127.5 93 71.0
AUR62037730 Chenopodium quinoa HOM05D004941 ORTHO05D005624 4.8e-28 127.5 93 71.0
unitig_32.g11683 Utricularia gibba HOM05D004941 ORTHO05D005624 4.8e-28 127.5 93 74.2
unitig_748.g7345 Utricularia gibba HOM05D004941 ORTHO05D005624 4.8e-28 127.5 93 74.2
DCAR_027374 Daucus carota HOM05D004941 ORTHO05D005624 6.2e-28 127.1 93 68.8
Os02g0817500 Oryza sativa ssp. japonica HOM05D004941 ORTHO05D005624 6.2e-28 127.1 93 72.0
Aqoxy2G03791 Aquilegia oxysepala HOM05D004941 ORTHO05D005624 8.1e-28 126.7 93 72.0
HanXRQChr11g0342701 Helianthus annuus HOM05D004941 ORTHO05D005624 3.1e-27 124.8 93 71.0
Lsat_1_v5_gn_2_43301 Lactuca sativa HOM05D004941 ORTHO05D005624 4.0e-27 124.4 91 70.3
HPP92_020758 Vanilla planifolia HOM05D004941 ORTHO05D005624 4.0e-27 124.4 93 67.7
Zm00001eb258940 Zea mays HOM05D004941 ORTHO05D005624 5.3e-27 124.0 93 69.9
ECA238G2545 Erigeron canadensis HOM05D004941 ORTHO05D005624 6.9e-27 123.6 92 67.4
Cc03_g07250 Coffea canephora HOM05D004941 ORTHO05D005624 9.0e-27 123.2 93 71.0
Nitab4.5_0009699g0010 Nicotiana tabacum HOM05D004941 ORTHO05D005624 9.0e-27 123.2 88 72.7
HanXRQChr14g0435051 Helianthus annuus HOM05D004941 ORTHO05D005624 1.2e-26 122.9 93 68.8
Hund25548 Selenicereus undatus HOM05D004941 ORTHO05D005624 1.2e-26 122.9 93 67.7
TAR362G1130 Trochodendron aralioides HOM05D004941 ORTHO05D005624 1.2e-26 122.9 93 69.9
THA.LOC104816018 Tarenaya hassleriana HOM05D004941 ORTHO05D005624 4.5e-26 120.9 93 68.8
PSO170G0276 Papaver somniferum HOM05D004941 ORTHO05D005624 6.4e-25 117.1 93 64.5
PSO764G0052 Papaver somniferum HOM05D004941 ORTHO05D005624 4.2e-24 114.4 93 63.4
Mapoly0072s0010 Marchantia polymorpha HOM05D004941 ORTHO05D005624 7.1e-24 113.6 93 62.4
SEGI_23376 Sequoiadendron giganteum HOM05D004941 ORTHO05D005624 1.0e-22 109.8 80 72.5
CiPaw.01G126300 Carya illinoinensis HOM05D004941 ORTHO05D005624 3.0e-22 108.2 84 66.7
SMO119G0453 Selaginella moellendorffii HOM05D004941 ORTHO05D005624 6.7e-22 107.1 93 60.2
Atru.chr4.1784 Acer truncatum HOM05D004941 ORTHO05D005624 1.9e-21 105.5 76 71.1
Nitab4.5_0005337g0010 Nicotiana tabacum HOM05D004941 ORTHO05D005624 4.8e-20 100.9 81 67.9
Cpa.g.sc59.94 Carica papaya HOM05D004941 ORTHO05D005624 2.1e-15 85.5 43 93.0
arahy.Tifrunner.gnm1.ann1.9BGX48 Arachis hypogaea HOM05D004941 ORTHO05D005624 4.6e-15 84.3 43 90.7
CSS0034559 Camellia sinensis var. sinensis HOM05D004941 ORTHO05D005624 8.7e-14 80.1 43 86.0
Pp3c9_7970 Physcomitrium patens HOM05D004941 ORTHO05D005624 2.5e-13 78.6 81 48.1
Pp3c15_3990 Physcomitrium patens HOM05D004941 ORTHO05D005624 7.4e-13 77.0 87 46.0
Zm00001eb191380 Zea mays HOM05D004941 ORTHO05D005624 1.3e-12 76.3 43 81.4
CBR_g12335 Chara braunii HOM05D004941 ORTHO05D005624 3.8e-09 64.7 73 45.2
HanXRQChr12g0368351 Helianthus annuus HOM05D004941 ORTHO05D005624 6.5e-09 63.9 40 75.0
HanXRQChr12g0368381 Helianthus annuus HOM05D004941 ORTHO05D005624 6.5e-09 63.9 40 72.5
Oeu001462.1 Olea europaea HOM05D004941 ORTHO05D005624 1.3e-06 56.2 34 76.5
AagrBONN_evm.TU.Sc2ySwM_228.3127 Anthoceros agrestis HOM05D004941 ORTHO05D005624 8.7e-06 53.5 46 56.5


User provided reference genes

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