Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_33733 Corchorus olitorius HOM05D003314 ORTHO05D159803 3.5e-29 131.0 67 100.0
Duzib150G1198 Durio zibethinus HOM05D003314 ORTHO05D004164 2.9e-07 58.2 35 85.7
Atru.chr3.4168 Acer truncatum HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
AL1G17230 Arabidopsis lyrata HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
AT1G07110 Arabidopsis thaliana HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
MSTRG.12679 Avicennia marina HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
EL10Ac9g22391 Beta vulgaris HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
BcaB03g13407 Brassica carinata HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
BcaC07g42027 Brassica carinata HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
A09p66600 Brassica napus HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
C08p02820 Brassica napus HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
C08p50810 Brassica napus HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
BolC8t47077H Brassica oleracea HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
BolC8t52609H Brassica oleracea HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
BraA09t42000Z Brassica rapa HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
CSS0023090 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Carub.0001s0639 Capsella rubella HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
CARHR006800 Cardamine hirsuta HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Cpa.g.sc2.427 Carica papaya HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
CiPaw.13G074400 Carya illinoinensis HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
CiPaw.14G057100 Carya illinoinensis HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
ClCG02G019450 Citrullus lanatus HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
COL.COLO4_11092 Corchorus olitorius HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
MELO3C026830.2 Cucumis melo HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
CsaV3_6G016080 Cucumis sativus L. HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Dinv28665 Davidia involucrata HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Duzib168G0330 Durio zibethinus HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Eucgr.J01899 Eucalyptus grandis HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Thhalv10006901m.g Eutrema salsugineum HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Hma1.2p1_1981F.1_g309920 Hydrangea macrophylla HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Nn2g10926 Nelumbo nucifera HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Oeu051518.1 Olea europaea HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
PGR119G0996 Punica granatum HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
QL01p039122 Quercus lobata HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Sp1g05830 Schrenkiella parvula HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Sed0000995 Sechium edule HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Sc21g0000200 Simmondsia chinensis HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
SGA_v2.0_scaffold120G32908 Striga asiatica HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
THA.LOC104800751 Tarenaya hassleriana HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Thecc.09G352300 Theobroma cacao HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
TWI79G1066 Tripterygium wilfordii HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
TAR623G0703 Trochodendron aralioides HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
TAR636G3324 Trochodendron aralioides HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
vmacro02947 Vaccinium macrocarpon HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
GSVIVG01024699001 Vitis vinifera HOM05D003314 ORTHO05D004164 4.9e-07 57.4 31 96.8
Aqoxy4G02458 Aquilegia oxysepala HOM05D003314 ORTHO05D004164 6.5e-07 57.0 31 93.5
arahy.Tifrunner.gnm1.ann1.99UL3I Arachis hypogaea HOM05D003314 ORTHO05D004164 6.5e-07 57.0 31 93.5
arahy.Tifrunner.gnm1.ann1.H173G9 Arachis hypogaea HOM05D003314 ORTHO05D004164 6.5e-07 57.0 31 93.5
MSTRG.17878 Avicennia marina HOM05D003314 ORTHO05D004164 6.5e-07 57.0 31 93.5
Dinv09644 Davidia involucrata HOM05D003314 ORTHO05D004164 6.5e-07 57.0 31 93.5
Glyma.11G172200 Glycine max HOM05D003314 ORTHO05D004164 6.5e-07 57.0 31 93.5
Glyma.18G060600 Glycine max HOM05D003314 ORTHO05D004164 6.5e-07 57.0 31 93.5
Hma1.2p1_1747F.1_g300540 Hydrangea macrophylla HOM05D003314 ORTHO05D004164 6.5e-07 57.0 31 93.5
Lalb_Chr15g0083041 Lupinus albus HOM05D003314 ORTHO05D004164 6.5e-07 57.0 31 93.5
Manes.18G141800 Manihot esculenta HOM05D003314 ORTHO05D004164 6.5e-07 57.0 31 93.5
Aa31LG1G6350 Aethionema arabicum HOM05D003314 ORTHO05D004164 1.1e-06 56.2 31 93.5
Nitab4.5_0000752g0070 Nicotiana tabacum HOM05D003314 ORTHO05D004164 1.1e-06 56.2 31 93.5
Phvul.006G069900 Phaseolus vulgaris HOM05D003314 ORTHO05D004164 1.1e-06 56.2 31 90.3
Rhsim13G0067500 Rhododendron simsii HOM05D003314 ORTHO05D004164 1.1e-06 56.2 31 93.5
VMungo0540G1658 Vigna mungo HOM05D003314 ORTHO05D004164 1.1e-06 56.2 31 90.3
Actinidia32631 Actinidia chinensis HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
Ah.01g002410 Amaranthus hybridus HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
A08p35790 Brassica napus HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
BraA08t35486Z Brassica rapa HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
CAN.G1095.9 Capsicum annuum HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
Cfa011730 Carpinus fangiana HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
Cc01_g14510 Coffea canephora HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
Haze_24369 Corylus avellana HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
Migut.N00780 Erythranthe guttata HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
MBI15_g29380_MAGBIO Magnolia biondii HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
Nitab4.5_0000839g0080 Nicotiana tabacum HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
Nitab4.5_0002352g0010 Nicotiana tabacum HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
Peaxi162Scf00540g00022 Petunia axillaris HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
Potri.001G279100 Populus trichocarpa HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
Potri.009G073800 Populus trichocarpa HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
SalBow2G2371 Salvia bowleyana HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
SGA_v2.0_scaffold146G36142 Striga asiatica HOM05D003314 ORTHO05D004164 1.4e-06 55.8 31 93.5
Glyma.11G169700 Glycine max HOM05D003314 ORTHO05D004164 1.9e-06 55.5 31 90.3
THA.LOC104815810 Tarenaya hassleriana HOM05D003314 ORTHO05D004164 1.9e-06 55.5 31 90.3
arahy.Tifrunner.gnm1.ann1.Y0JIV8 Arachis hypogaea HOM05D003314 ORTHO05D004164 2.5e-06 55.1 31 90.3
BcaC05g24676 Brassica carinata HOM05D003314 ORTHO05D004164 2.5e-06 55.1 31 93.5
A10p05630 Brassica napus HOM05D003314 ORTHO05D004164 2.5e-06 55.1 31 93.5
C05p05170 Brassica napus HOM05D003314 ORTHO05D004164 2.5e-06 55.1 31 93.5
BolC5t29289H Brassica oleracea HOM05D003314 ORTHO05D004164 2.5e-06 55.1 31 93.5
BraA10t42824Z Brassica rapa HOM05D003314 ORTHO05D004164 2.5e-06 55.1 31 93.5
ECA248G0301 Erigeron canadensis HOM05D003314 ORTHO05D004164 2.5e-06 55.1 31 93.5
HanXRQChr01g0011671 Helianthus annuus HOM05D003314 ORTHO05D004164 2.5e-06 55.1 31 93.5
Lsat_1_v5_gn_5_172641 Lactuca sativa HOM05D003314 ORTHO05D004164 2.5e-06 55.1 31 93.5
Lj1A130T38 Lonicera japonica HOM05D003314 ORTHO05D004164 2.5e-06 55.1 31 93.5
CSS0022626 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 3.2e-06 54.7 31 93.5
CSS0049027 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 3.2e-06 54.7 31 93.5
Ciclev10027872m.g Citrus clementina HOM05D003314 ORTHO05D004164 3.2e-06 54.7 31 93.5
Lsat_1_v5_gn_9_19140 Lactuca sativa HOM05D003314 ORTHO05D004164 3.2e-06 54.7 31 90.3
TWI31G0289 Tripterygium wilfordii HOM05D003314 ORTHO05D004164 3.2e-06 54.7 31 93.5
MD03G1064800 Malus domestica HOM05D003314 ORTHO05D004164 4.2e-06 54.3 31 90.3
Hund08127 Selenicereus undatus HOM05D003314 ORTHO05D004164 4.2e-06 54.3 31 93.5
MD11G1068800 Malus domestica HOM05D003314 ORTHO05D004164 5.5e-06 53.9 31 90.3
arahy.Tifrunner.gnm1.ann1.UVU1B7 Arachis hypogaea HOM05D003314 ORTHO05D004164 7.1e-06 53.5 31 87.1
ECA247G1043 Erigeron canadensis HOM05D003314 ORTHO05D004164 7.1e-06 53.5 31 90.3
HanXRQChr08g0229151 Helianthus annuus HOM05D003314 ORTHO05D004164 7.1e-06 53.5 31 90.3
Hma1.2p1_0223F.1_g094300 Hydrangea macrophylla HOM05D003314 ORTHO05D004164 7.1e-06 53.5 31 93.5
Lj6g0001244 Lotus japonicus HOM05D003314 ORTHO05D004164 7.1e-06 53.5 31 93.5
Medtr3g464770 Medicago truncatula HOM05D003314 ORTHO05D004164 7.1e-06 53.5 31 93.5
Psat5g157680 Pisum sativum HOM05D003314 ORTHO05D004164 7.1e-06 53.5 31 93.5
Solyc06g082150.4 Solanum lycopersicum HOM05D003314 ORTHO05D004164 7.1e-06 53.5 31 90.3
Sopen06g033530 Solanum pennellii HOM05D003314 ORTHO05D004164 7.1e-06 53.5 31 90.3
PGSC0003DMG400030370 Solanum tuberosum HOM05D003314 ORTHO05D004164 7.1e-06 53.5 31 90.3
TPR.G32920 Trifolium pratense HOM05D003314 ORTHO05D004164 7.1e-06 53.5 31 93.5
ATR0681G099 Amborella trichopoda HOM05D003314 ORTHO05D004164 9.3e-06 53.1 31 90.3
Prupe.6G053800 Prunus persica HOM05D003314 ORTHO05D004164 9.3e-06 53.1 31 90.3


User provided reference genes

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