Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 0.0e+00 1155.2 619 100.0
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 1.4e-257 892.9 634 79.2
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 3.0e-252 875.2 634 74.9
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 2.0e-251 872.5 633 76.9
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 3.4e-251 871.7 641 74.3
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 8.3e-250 867.1 645 76.4
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 8.3e-242 840.5 634 73.2
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 5.1e-231 804.7 629 72.7
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 5.1e-231 804.7 629 72.7
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 7.6e-227 790.8 629 72.3
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 3.5e-192 675.6 635 61.1
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 7.2e-185 651.4 632 60.8
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 3.4e-179 632.5 633 58.6
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 7.7e-179 631.3 640 59.8
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 2.1e-176 623.2 635 58.7
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 1.7e-173 613.6 636 57.5
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 2.5e-169 599.7 637 57.5
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 3.0e-167 592.8 668 54.9
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 4.8e-165 585.5 660 53.9
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 1.1e-164 584.3 638 58.0
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 7.7e-163 578.2 691 55.3
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 1.0e-159 567.8 638 55.0
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 1.5e-158 563.9 639 55.1
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 2.2e-157 560.1 636 54.4
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 2.2e-157 560.1 644 54.8
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 2.2e-157 560.1 651 55.1
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 1.6e-155 553.9 635 55.4
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 6.5e-154 548.5 646 53.6
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 3.2e-153 546.2 643 54.9
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 7.5e-150 535.0 645 53.5
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 4.8e-149 532.3 633 52.3
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.1e-148 531.2 635 55.0
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 3.1e-148 529.6 646 52.2
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 3.5e-147 526.2 633 52.8
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 1.3e-146 524.2 632 53.0
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 3.8e-146 522.7 643 53.0
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 9.5e-145 518.1 634 53.3
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 6.3e-141 505.4 635 52.8
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 3.1e-140 503.1 641 51.0
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 4.5e-139 499.2 651 50.7
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 7.8e-139 498.4 663 49.0
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 8.6e-138 495.0 659 50.7
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 7.3e-137 491.9 633 51.5
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 1.2e-136 491.1 629 51.4
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.0e-135 488.0 650 50.3
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 5.2e-135 485.7 655 50.7
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 5.2e-135 485.7 653 50.4
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 5.7e-134 482.3 652 49.5
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 7.5e-134 481.9 655 52.7
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 9.8e-134 481.5 649 50.8
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 2.2e-133 480.3 653 49.9
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 2.9e-133 479.9 542 53.5
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 2.9e-133 479.9 653 49.8
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 1.4e-132 477.6 643 51.2
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 2.4e-132 476.9 647 51.9
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 3.2e-132 476.5 648 51.2
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 1.2e-131 474.6 663 47.5
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 3.9e-130 469.5 631 50.6
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 3.3e-129 466.5 651 51.5
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 5.6e-129 465.7 649 48.5
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 2.3e-127 460.3 648 48.6
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 5.8e-126 455.7 439 61.0
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 5.4e-124 449.1 595 51.9
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 9.2e-124 448.4 649 46.8
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 1.0e-122 444.9 445 60.0
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 6.6e-122 442.2 632 48.7
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 1.9e-121 440.7 707 45.5
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 5.6e-121 439.1 494 54.7
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 3.1e-119 433.3 647 45.9
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 2.9e-117 426.8 674 45.4
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.4e-116 424.5 629 47.5
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 7.8e-115 418.7 631 47.5
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 1.2e-112 411.4 642 46.0
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 8.1e-112 408.7 647 47.4
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 4.0e-111 406.4 647 47.3
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 2.0e-110 404.1 686 43.7
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 3.4e-110 403.3 526 51.3
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 2.2e-109 400.6 638 45.8
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 1.7e-106 391.0 636 43.9
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 6.6e-106 389.0 653 44.9
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 8.7e-106 388.7 630 47.3
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 2.5e-105 387.1 659 42.8
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 3.6e-104 383.3 648 45.1
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 1.1e-103 381.7 652 45.1
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.8e-103 380.9 598 46.7
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 3.2e-100 370.2 646 43.7
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 4.6e-99 366.3 476 49.6
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 2.3e-98 364.0 639 44.3
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 3.0e-98 363.6 632 43.0
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 1.9e-97 360.9 634 43.5
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 3.3e-97 360.1 649 43.1
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 2.8e-96 357.1 638 43.6
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 9.0e-95 352.1 642 43.6
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 4.5e-94 349.7 541 45.8
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 9.9e-94 348.6 635 42.4
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.3e-93 348.2 641 42.1
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 4.9e-93 346.3 641 43.1
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 6.4e-93 345.9 639 44.0
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 1.1e-92 345.1 636 43.1
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 1.4e-92 344.7 639 42.9
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 1.4e-92 344.7 639 42.9
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.7e-91 340.5 495 48.1
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 1.0e-90 338.6 614 42.7
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 3.9e-90 336.7 623 42.7
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 6.7e-90 335.9 627 41.9
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 2.8e-88 330.5 681 39.6
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 1.8e-87 327.8 692 40.9
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 2.4e-87 327.4 449 49.0
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 3.4e-86 323.6 506 44.7
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.7e-85 321.2 473 46.1
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 4.9e-85 319.7 633 40.0
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.7e-83 313.9 668 40.4
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 2.5e-81 307.4 714 37.8
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 3.8e-77 293.5 654 41.7
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 4.2e-76 290.0 361 52.6
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 2.2e-72 277.7 439 45.1
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 1.4e-71 275.0 434 45.4
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 3.4e-70 270.4 774 34.9
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 1.6e-67 261.5 673 37.1
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 4.1e-63 246.9 463 41.9
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 9.4e-60 235.7 162 71.0
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 4.4e-57 226.9 611 34.2
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 2.2e-53 214.5 255 51.8
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 1.1e-52 212.2 722 36.8
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 7.2e-52 209.5 648 36.6
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 1.4e-50 205.3 144 73.6
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 2.6e-46 191.0 650 33.8
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 2.0e-41 174.9 194 57.2
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 2.7e-30 137.9 765 28.1
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 5.7e-25 120.2 440 31.8
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 2.1e-19 101.7 110 56.4
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 6.8e-18 96.7 1008 24.3
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 1.5e-17 95.5 184 39.1
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 3.4e-17 94.4 356 30.3
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 5.4e-15 87.0 121 45.5
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 7.3e-12 76.6 112 41.1
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 1.6e-11 75.5 188 35.6
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.4e-10 72.4 75 61.3
SEGI_29006 Sequoiadendron giganteum HOM05D005409 ORTHO05D006456 7.8e-06 56.6 245 37.1


User provided reference genes

Program Settings