Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 0.0e+00 1202.6 661 100.0
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 8.3e-232 807.4 657 74.3
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 5.4e-207 724.9 663 68.8
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 6.9e-178 628.2 662 61.5
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 3.4e-177 625.9 574 68.1
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 2.7e-174 616.3 663 61.1
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 3.6e-174 615.9 630 63.3
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 6.1e-174 615.1 574 67.4
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 2.6e-169 599.7 664 60.4
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 1.3e-163 580.9 651 57.9
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 4.2e-159 565.8 689 53.1
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 8.8e-157 558.1 555 64.3
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 2.8e-155 553.1 675 53.8
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 2.4e-154 550.1 689 52.4
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 7.7e-153 545.0 692 51.6
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.8e-152 542.7 690 52.8
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 1.9e-151 540.4 692 52.2
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 4.2e-151 539.3 692 51.7
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 5.5e-151 538.9 676 51.0
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 9.4e-151 538.1 668 51.8
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 2.3e-149 533.5 689 51.2
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 3.7e-147 526.2 682 52.1
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 5.4e-146 522.3 668 53.7
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 3.5e-145 519.6 673 52.3
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 3.5e-145 519.6 569 56.1
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 7.7e-145 518.5 669 55.8
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 7.7e-145 518.5 674 54.7
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 5.5e-143 512.3 672 52.8
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 7.2e-143 511.9 653 51.6
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 1.4e-141 507.7 672 52.5
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 2.3e-141 506.9 671 50.5
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 1.5e-140 504.2 658 55.3
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 5.7e-140 502.3 646 51.1
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 3.7e-139 499.6 650 51.5
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 4.9e-139 499.2 711 50.4
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 5.4e-138 495.7 677 50.5
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 5.0e-136 489.2 576 53.8
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 6.6e-136 488.8 674 52.7
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 1.5e-135 487.6 712 47.9
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 9.5e-135 485.0 677 48.7
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 2.1e-134 483.8 664 49.4
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 3.6e-134 483.0 594 52.5
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 4.4e-132 476.1 661 49.2
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 1.4e-130 471.1 684 49.7
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 4.1e-130 469.5 678 46.8
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 1.5e-127 461.1 702 49.3
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 1.5e-127 461.1 678 50.7
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 7.3e-127 458.8 656 46.6
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 4.0e-117 426.4 630 48.3
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 8.3e-115 418.7 449 62.1
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 1.5e-111 407.9 672 44.8
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 1.5e-111 407.9 437 61.1
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 2.2e-107 394.0 444 57.7
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 3.1e-101 373.6 304 66.8
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 5.2e-101 372.9 609 48.4
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 8.9e-101 372.1 538 50.2
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 1.0e-96 358.6 456 58.3
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 2.3e-80 304.3 429 49.0
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 1.3e-78 298.5 314 56.7
Peaxi162Scf00089g01230 Petunia axillaris HOM05D007670 ORTHO05D009646 1.8e-77 294.7 279 60.9
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 4.0e-77 293.5 680 36.8
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 6.9e-77 292.7 501 43.9
Solyc03g112120.3 Solanum lycopersicum HOM05D007670 ORTHO05D009646 1.0e-72 278.9 281 57.3
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 5.1e-72 276.6 547 39.5
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 1.6e-70 271.6 648 36.0
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 1.2e-68 265.4 641 35.7
Glyma.17G124700 Glycine max HOM05D007670 ORTHO05D009646 3.2e-58 230.7 224 58.9
Peaxi162Scf00089g01229 Petunia axillaris HOM05D007670 ORTHO05D009646 4.2e-58 230.3 387 51.9
Solyc03g112110.1 Solanum lycopersicum HOM05D007670 ORTHO05D009646 4.2e-58 230.3 384 49.5
Actinidia24601 Actinidia chinensis HOM05D007670 ORTHO05D009646 4.6e-57 226.9 233 53.6
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 1.5e-52 211.8 230 50.9
Zm00001eb143920 Zea mays HOM05D007670 ORTHO05D009646 1.2e-39 169.1 318 38.1
TAR629G0999 Trochodendron aralioides HOM05D007670 ORTHO05D009646 7.0e-37 159.8 216 51.4
Sabra15G0107400 Salix brachista HOM05D007670 ORTHO05D009646 3.5e-36 157.5 512 33.2
Os01g0909300 Oryza sativa ssp. japonica HOM05D007670 ORTHO05D009646 1.7e-35 155.2 164 50.6
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.7e-33 147.9 228 40.8
Zm00001eb393770 Zea mays HOM05D007670 ORTHO05D009646 1.5e-31 142.1 162 48.1
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.7e-28 131.3 301 30.6
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 2.7e-28 131.3 301 30.6
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.0e-27 129.4 229 35.4
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.8e-24 118.6 226 32.7
Mapoly0020s0028 Marchantia polymorpha HOM05D007670 ORTHO05D009646 4.9e-22 110.5 220 36.4
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.1e-21 109.4 299 29.4
QL10p006748 Quercus lobata HOM05D007670 ORTHO05D009646 5.4e-21 107.1 133 56.4
CsaV3_1G008900 Cucumis sativus L. HOM05D007670 ORTHO05D009646 1.7e-19 102.1 131 53.4
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 7.3e-18 96.7 227 30.8
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 4.0e-16 90.9 265 27.5
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 2.9e-14 84.7 480 26.7
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 3.5e-12 77.8 240 26.2
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 3.5e-12 77.8 242 26.4
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 7.8e-12 76.6 240 26.2
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 7.8e-12 76.6 240 27.1
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 1.7e-11 75.5 242 25.2
Aqoxy3G00774 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 2.3e-11 75.1 145 34.5
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 3.0e-11 74.7 240 25.8
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 3.0e-11 74.7 256 23.4
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 3.0e-11 74.7 240 25.8
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 3.0e-11 74.7 227 26.9
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 3.9e-11 74.3 250 26.0
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 3.9e-11 74.3 226 26.1
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 6.6e-11 73.6 241 25.3
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 6.6e-11 73.6 240 25.8
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 1.1e-10 72.8 271 24.4
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 1.5e-10 72.4 242 25.2
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 1.5e-10 72.4 226 25.2
MELO3C031542.2 Cucumis melo HOM05D007670 ORTHO05D009646 5.6e-10 70.5 104 48.1
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 7.3e-10 70.1 240 24.2
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 7.3e-10 70.1 240 25.0
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 7.3e-10 70.1 233 26.2
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 7.3e-10 70.1 233 26.2
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 9.5e-10 69.7 241 23.7
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 9.5e-10 69.7 194 26.3
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 1.2e-09 69.3 240 25.4
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 1.2e-09 69.3 226 26.1
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 1.2e-09 69.3 241 23.7
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 1.2e-09 69.3 242 25.2
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 1.6e-09 68.9 256 24.2
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 1.6e-09 68.9 249 24.1
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 2.1e-09 68.6 244 23.4
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 2.1e-09 68.6 222 24.8
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 2.1e-09 68.6 266 24.8
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 2.8e-09 68.2 265 24.9
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 2.8e-09 68.2 240 23.8
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 2.8e-09 68.2 262 24.8
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 3.6e-09 67.8 240 25.0
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 6.2e-09 67.0 209 24.9
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 6.2e-09 67.0 265 24.9
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 1.1e-08 66.2 242 25.2
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 1.1e-08 66.2 242 25.2
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 1.4e-08 65.9 231 24.7
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 1.8e-08 65.5 222 26.6
TAR626G0822 Trochodendron aralioides HOM05D007837 ORTHO05D009965 1.8e-08 65.5 240 24.6
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 2.3e-08 65.1 200 25.5
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 3.1e-08 64.7 256 24.6
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 5.2e-08 63.9 232 24.6
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 5.2e-08 63.9 222 24.3
MD05G1261900 Malus domestica HOM05D007837 ORTHO05D009965 5.2e-08 63.9 242 25.2
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 5.2e-08 63.9 241 23.7
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 4.4e-07 60.8 240 23.3
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 5.8e-07 60.5 200 26.0
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 7.5e-07 60.1 230 22.6
RcHm_v2.0_Chr5g0018641 Rosa chinensis HOM05D007837 ORTHO05D009965 1.3e-06 59.3 240 22.5
Potri.001G443025 Populus trichocarpa HOM05D007837 ORTHO05D009965 2.9e-06 58.2 238 23.9


User provided reference genes

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