Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 1.6e-82 309.3 149 100.0
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 6.8e-49 197.6 165 66.7
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 8.9e-33 144.1 155 56.1
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 7.1e-30 134.4 107 68.2
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 1.3e-28 130.2 172 48.8
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.1e-27 127.1 86 73.3
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 1.9e-27 126.3 78 82.1
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 7.3e-27 124.4 104 64.4
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 2.4e-25 119.4 129 53.5
Oeu040617.1 Olea europaea HOM05D008016 ORTHO05D004271 4.0e-25 118.6 72 84.7
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 2.6e-24 115.9 63 90.5
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 3.4e-24 115.5 139 49.6
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 3.4e-24 115.5 139 49.6
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 4.4e-24 115.2 112 56.2
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 4.4e-24 115.2 173 46.2
Gohir.D07G151450 Gossypium hirsutum HOM05D008016 ORTHO05D004271 7.6e-24 114.4 74 75.7
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 9.9e-24 114.0 73 82.2
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 9.9e-24 114.0 73 82.2
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 9.9e-24 114.0 73 82.2
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.4e-22 110.2 135 49.6
RcHm_v2.0_Chr2g0095251 Rosa chinensis HOM05D008016 ORTHO05D004271 2.4e-22 109.4 69 78.3
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 3.2e-22 109.0 74 73.0
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 3.2e-22 109.0 119 52.1
vmacro22420 Vaccinium macrocarpon HOM05D008016 ORTHO05D010055 4.2e-22 108.6 80 72.5
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 7.3e-19 97.8 68 69.1
Sed0006095 Sechium edule HOM05D010190 ORTHO05D010055 9.0e-17 90.9 66 75.8
Aa31csc553G20 Aethionema arabicum HOM05D010190 ORTHO05D021180 3.4e-16 89.0 46 95.7
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 1.3e-15 87.0 115 53.9
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 1.7e-15 86.7 53 73.6
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 1.4e-14 83.6 39 92.3
MD03G1269900 Malus domestica HOM05D008037 ORTHO05D004271 7.9e-13 77.8 52 73.1
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 7.9e-13 77.8 115 44.3
Sed0021589 Sechium edule HOM05D008016 ORTHO05D004271 3.9e-12 75.5 146 36.3
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 8.7e-12 74.3 36 88.9
C04p22520 Brassica napus HOM05D008016 ORTHO05D004271 3.3e-11 72.4 54 74.1
BolSC29t60497H Brassica oleracea HOM05D008016 ORTHO05D010588 1.3e-10 70.5 56 67.9
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 1.3e-10 70.5 56 67.9
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 1.3e-10 70.5 56 67.9
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 1.3e-10 70.5 56 67.9
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 1.3e-10 70.5 56 67.9
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 1.3e-10 70.5 56 67.9
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 1.3e-10 70.5 56 67.9
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 1.3e-10 70.5 56 67.9
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 1.3e-10 70.5 56 67.9
BolSC49t61153H Brassica oleracea HOM05D008016 ORTHO05D010588 2.1e-10 69.7 42 85.7
arahy.Tifrunner.gnm1.ann1.54SFA9 Arachis hypogaea HOM05D008037 ORTHO05D004271 3.7e-10 68.9 51 74.5
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.8e-09 66.6 33 87.9
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 6.9e-09 64.7 33 93.9
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 6.9e-09 64.7 33 93.9
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 1.5e-08 63.5 43 72.1
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 2.0e-08 63.2 69 55.1
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 2.0e-08 63.2 32 93.8
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 2.6e-08 62.8 32 90.6
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 2.6e-08 62.8 33 90.9
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 5.8e-08 61.6 33 87.9
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.8e-08 61.6 64 53.1
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.3e-07 60.5 33 81.8
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.7e-07 60.1 32 87.5
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.7e-07 60.1 41 75.6
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 1.7e-07 60.1 33 84.8
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 2.2e-07 59.7 32 87.5
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 2.2e-07 59.7 31 90.3
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 2.2e-07 59.7 34 85.3
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.9e-07 59.3 32 87.5
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 2.9e-07 59.3 33 81.8
EL10Ac6g14592 Beta vulgaris HOM05D008354 ORTHO05D010055 3.8e-07 58.9 37 86.5
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 3.8e-07 58.9 35 82.9
arahy.Tifrunner.gnm1.ann1.61DFKT Arachis hypogaea HOM05D008037 ORTHO05D004271 8.4e-07 57.8 29 93.1
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 8.4e-07 57.8 31 83.9
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.4e-07 57.8 69 50.7
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.1e-06 57.4 32 87.5
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 2.4e-06 56.2 63 50.8
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.2e-06 55.8 34 79.4
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 4.2e-06 55.5 34 76.5
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 5.5e-06 55.1 35 77.1
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 7.1e-06 54.7 30 86.7
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 9.3e-06 54.3 33 78.8
Peaxi162Scf00210g00153 Petunia axillaris HOM05D008037 ORTHO05D004271 9.3e-06 54.3 32 81.2


User provided reference genes

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