Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_33018 Corchorus olitorius HOM05D006200 ORTHO05D007569 4.2e-92 341.3 166 100.0
Duzib138G0810 Durio zibethinus HOM05D006200 ORTHO05D007569 4.4e-49 198.4 163 62.0
Thecc.01G190500 Theobroma cacao HOM05D006200 ORTHO05D007569 1.3e-48 196.8 163 62.6
Gohir.D07G172300 Gossypium hirsutum HOM05D006200 ORTHO05D007569 1.0e-45 187.2 160 60.6
Gorai.001G192600 Gossypium raimondii HOM05D006200 ORTHO05D007569 1.0e-45 187.2 160 60.6
Gohir.A07G167000 Gossypium hirsutum HOM05D006200 ORTHO05D007569 3.9e-45 185.3 160 60.0
vmacro09406 Vaccinium macrocarpon HOM05D006200 ORTHO05D007569 1.2e-41 173.7 157 58.0
Ciclev10017136m.g Citrus clementina HOM05D006200 ORTHO05D007569 5.8e-41 171.4 163 55.2
Aqoxy4G02230 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 1.3e-40 170.2 159 55.3
Cpa.g.sc136.18 Carica papaya HOM05D006200 ORTHO05D007569 1.7e-40 169.9 155 56.1
Haze_12649 Corylus avellana HOM05D006200 ORTHO05D007569 3.8e-40 168.7 157 54.1
Potri.014G164500 Populus trichocarpa HOM05D006200 ORTHO05D007569 3.8e-40 168.7 155 55.5
Cfa014235 Carpinus fangiana HOM05D000160 ORTHO05D000496 4.9e-40 168.3 157 54.1
MD09G1123700 Malus domestica HOM05D006200 ORTHO05D007569 6.4e-40 167.9 155 55.5
Sed0007295 Sechium edule HOM05D006200 ORTHO05D007569 6.4e-40 167.9 155 54.8
Nn1g07469 Nelumbo nucifera HOM05D006200 ORTHO05D007569 8.4e-40 167.5 155 54.2
Rhsim04G0037800 Rhododendron simsii HOM05D006200 ORTHO05D007569 8.4e-40 167.5 155 55.5
MSTRG.14921 Avicennia marina HOM05D006200 ORTHO05D007569 1.1e-39 167.2 162 53.7
Dinv05360 Davidia involucrata HOM05D006200 ORTHO05D007569 1.1e-39 167.2 155 55.5
TAR626G0047 Trochodendron aralioides HOM05D006200 ORTHO05D007569 1.9e-39 166.4 155 52.9
Cc05_g02100 Coffea canephora HOM05D006200 ORTHO05D007569 4.2e-39 165.2 155 54.8
Hma1.2p1_0545F.1_g176060 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 4.2e-39 165.2 155 55.5
MD17G1114500 Malus domestica HOM05D006200 ORTHO05D007569 4.2e-39 165.2 155 54.8
arahy.Tifrunner.gnm1.ann1.GBED9Y Arachis hypogaea HOM05D006200 ORTHO05D007569 5.4e-39 164.9 155 53.5
Glyma.14G048700 Glycine max HOM05D006200 ORTHO05D007569 5.4e-39 164.9 155 51.6
Cc02_g04700 Coffea canephora HOM05D006200 ORTHO05D007569 7.1e-39 164.5 155 53.5
QL08p028355 Quercus lobata HOM05D006200 ORTHO05D007569 9.3e-39 164.1 154 53.2
ATR0624G019 Amborella trichopoda HOM05D006200 ORTHO05D007569 1.2e-38 163.7 155 53.5
CANSAT64G0383 Cannabis sativa HOM05D006200 ORTHO05D007569 1.2e-38 163.7 155 51.6
Glyma.02G268700 Glycine max HOM05D006200 ORTHO05D007569 2.1e-38 162.9 155 51.0
Os03g0751000 Oryza sativa ssp. japonica HOM05D006200 ORTHO05D007569 2.1e-38 162.9 154 53.2
Prupe.3G200400 Prunus persica HOM05D006200 ORTHO05D007569 2.1e-38 162.9 155 53.5
Sed0012997 Sechium edule HOM05D006200 ORTHO05D007569 2.1e-38 162.9 153 55.6
Migut.M00041 Erythranthe guttata HOM05D006200 ORTHO05D007569 2.7e-38 162.5 155 54.2
LjContig00029g0002447 Lotus japonicus HOM05D006200 ORTHO05D007569 2.7e-38 162.5 155 52.9
Oeu040457.1 Olea europaea HOM05D006200 ORTHO05D007569 2.7e-38 162.5 155 54.2
PGSC0003DMG400006126 Solanum tuberosum HOM05D006200 ORTHO05D007569 2.7e-38 162.5 157 51.6
HPP92_012226 Vanilla planifolia HOM05D006200 ORTHO05D007569 2.7e-38 162.5 157 52.9
TWI36G1668 Tripterygium wilfordii HOM05D006200 ORTHO05D007569 3.5e-38 162.2 155 52.9
Atru.chr6.3355 Acer truncatum HOM05D006200 ORTHO05D007569 4.6e-38 161.8 155 52.9
ClCG02G002790 Citrullus lanatus HOM05D006200 ORTHO05D007569 4.6e-38 161.8 155 54.8
Peaxi162Scf00776g00024 Petunia axillaris HOM05D006200 ORTHO05D007569 4.6e-38 161.8 155 53.5
Solyc07g047700.4 Solanum lycopersicum HOM05D006200 ORTHO05D007569 6.0e-38 161.4 157 51.6
SGA_v2.0_scaffold181G39681 Striga asiatica HOM05D006200 ORTHO05D007569 6.0e-38 161.4 155 54.8
Actinidia09782 Actinidia chinensis HOM05D006200 ORTHO05D007569 7.9e-38 161.0 155 53.5
FAN02G1931 Fragaria x ananassa HOM05D006200 ORTHO05D007569 7.9e-38 161.0 155 54.8
Manes.12G061800 Manihot esculenta HOM05D006200 ORTHO05D007569 7.9e-38 161.0 155 53.5
Manes.13G063700 Manihot esculenta HOM05D006200 ORTHO05D007569 7.9e-38 161.0 155 52.3
Nitab4.5_0001774g0080 Nicotiana tabacum HOM05D006200 ORTHO05D007569 7.9e-38 161.0 155 51.6
Psat2g026360 Pisum sativum HOM05D006200 ORTHO05D007569 7.9e-38 161.0 155 52.3
THA.LOC104815354 Tarenaya hassleriana HOM05D006200 ORTHO05D007569 7.9e-38 161.0 155 53.5
Hma1.2p1_2053F.1_g312740 Hydrangea macrophylla HOM05D006200 ORTHO05D007569 1.0e-37 160.6 155 52.9
Medtr5g085420 Medicago truncatula HOM05D006200 ORTHO05D007569 1.0e-37 160.6 155 51.0
CAN.G1036.6 Capsicum annuum HOM05D006200 ORTHO05D007569 1.3e-37 160.2 155 52.3
Thhalv10002727m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 1.3e-37 160.2 163 51.5
CDE07G1212 Ceratophyllum demersum HOM05D006200 ORTHO05D007569 1.8e-37 159.8 155 52.3
BcaB06g26789 Brassica carinata HOM05D006200 ORTHO05D007569 2.3e-37 159.5 166 51.2
CiPaw.04G196600 Carya illinoinensis HOM05D006200 ORTHO05D007569 2.3e-37 159.5 160 50.0
MELO3C024201.2 Cucumis melo HOM05D006200 ORTHO05D007569 2.3e-37 159.5 162 53.1
Rhsim02G0017500 Rhododendron simsii HOM05D006200 ORTHO05D007569 2.3e-37 159.5 155 53.5
AT2G04900 Arabidopsis thaliana HOM05D006200 ORTHO05D007569 3.0e-37 159.1 166 50.6
FvH4_6g40890 Fragaria vesca HOM05D006200 ORTHO05D007569 3.0e-37 159.1 155 54.2
SalBow7G0450 Salvia bowleyana HOM05D006200 ORTHO05D007569 3.0e-37 159.1 155 52.3
AL3G42530 Arabidopsis lyrata HOM05D006200 ORTHO05D007569 3.9e-37 158.7 166 50.6
C07p10040 Brassica napus HOM05D006200 ORTHO05D007569 3.9e-37 158.7 155 52.9
BraA07t28456Z Brassica rapa HOM05D006200 ORTHO05D007569 3.9e-37 158.7 155 52.9
CSS0021565 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 3.9e-37 158.7 155 51.6
CARHR102920 Cardamine hirsuta HOM05D006200 ORTHO05D007569 3.9e-37 158.7 163 51.5
Lalb_Chr04g0250001 Lupinus albus HOM05D006200 ORTHO05D007569 3.9e-37 158.7 155 51.6
Zm00001eb057520 Zea mays HOM05D006200 ORTHO05D007569 3.9e-37 158.7 158 50.6
A07p06630 Brassica napus HOM05D006200 ORTHO05D007569 6.7e-37 157.9 155 52.9
Carub.0003s2650 Capsella rubella HOM05D006200 ORTHO05D007569 6.7e-37 157.9 163 50.3
Sp3g23500 Schrenkiella parvula HOM05D006200 ORTHO05D007569 6.7e-37 157.9 155 52.3
BcaC06g35887 Brassica carinata HOM05D006200 ORTHO05D007569 1.1e-36 157.1 155 52.3
BolC7t41451H Brassica oleracea HOM05D006200 ORTHO05D007569 1.1e-36 157.1 155 52.3
PSO541G4622 Papaver somniferum HOM05D006200 ORTHO05D007569 1.1e-36 157.1 155 50.3
Sopen07g024150 Solanum pennellii HOM05D006200 ORTHO05D007569 1.1e-36 157.1 155 51.0
TPR.G25628 Trifolium pratense HOM05D006200 ORTHO05D007569 1.5e-36 156.8 155 49.7
SEGI_07661 Sequoiadendron giganteum HOM05D006200 ORTHO05D007569 2.5e-36 156.0 158 51.9
RcHm_v2.0_Chr2g0156461 Rosa chinensis HOM05D006200 ORTHO05D007569 3.3e-36 155.6 155 53.5
PSO675G7132 Papaver somniferum HOM05D006200 ORTHO05D007569 5.6e-36 154.8 155 50.3
GSVIVG01030518001 Vitis vinifera HOM05D006200 ORTHO05D007569 7.4e-36 154.5 150 52.0
Lsat_1_v5_gn_5_121761 Lactuca sativa HOM05D006200 ORTHO05D007569 2.1e-35 152.9 155 51.0
Sabra14G0125300 Salix brachista HOM05D006200 ORTHO05D007569 2.1e-35 152.9 182 46.7
GSVIVG01030523001 Vitis vinifera HOM05D006200 ORTHO05D007569 2.8e-35 152.5 150 51.3
FAN05G3226 Fragaria x ananassa HOM05D006200 ORTHO05D007569 8.1e-35 151.0 170 50.0
FAN14G5749 Fragaria x ananassa HOM05D006200 ORTHO05D007569 8.1e-35 151.0 170 50.0
FAN09G2038 Fragaria x ananassa HOM05D006200 ORTHO05D007569 3.1e-34 149.1 170 49.4
HanXRQChr10g0306841 Helianthus annuus HOM05D006200 ORTHO05D007569 9.0e-34 147.5 155 48.4
Aa31sc107G30 Aethionema arabicum HOM05D006200 ORTHO05D007569 1.0e-32 144.1 157 51.6
Zm00001eb181090 Zea mays HOM05D006200 ORTHO05D007569 1.7e-32 143.3 149 49.7
CSS0018696 Camellia sinensis var. sinensis HOM05D006200 ORTHO05D007569 4.9e-32 141.7 143 51.0
Lj8A134G80 Lonicera japonica HOM05D006200 ORTHO05D007569 5.5e-31 138.3 141 51.8
Phvul.008G213600 Phaseolus vulgaris HOM05D006200 ORTHO05D007569 2.1e-30 136.3 80 73.8
Eucgr.A01040 Eucalyptus grandis HOM05D006200 ORTHO05D007569 6.0e-30 134.8 141 50.4
Mapoly0007s0279 Marchantia polymorpha HOM05D006200 ORTHO05D007569 6.0e-30 134.8 150 48.0
arahy.Tifrunner.gnm1.ann1.HJ95Y2 Arachis hypogaea HOM05D006200 ORTHO05D007569 6.7e-29 131.3 79 72.2
Zm00001eb025380 Zea mays HOM05D006200 ORTHO05D007569 1.9e-28 129.8 169 43.2
AUR62029092 Chenopodium quinoa HOM05D006200 ORTHO05D007569 4.3e-28 128.6 139 47.5
MBI16_g28733_MAGBIO Magnolia biondii HOM05D006200 ORTHO05D007569 4.3e-28 128.6 142 47.2
DCAR_021101 Daucus carota HOM05D006200 ORTHO05D007569 1.3e-27 127.1 79 70.9
Pp3c6_18880 Physcomitrium patens HOM05D006200 ORTHO05D007569 1.3e-27 127.1 150 44.7
ECA234G3013 Erigeron canadensis HOM05D006200 ORTHO05D007569 1.4e-26 123.6 141 45.4
SMO356G0472 Selaginella moellendorffii HOM05D006200 ORTHO05D007569 6.9e-26 121.3 81 66.7
Pp3c6_18900 Physcomitrium patens HOM05D006200 ORTHO05D007569 7.1e-23 111.3 141 43.3
PGR042G1757 Punica granatum HOM05D006200 ORTHO05D007569 9.3e-23 110.9 69 69.6
Thhalv10009367m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 1.2e-22 110.5 75 68.0
Zm00001eb402120 Zea mays HOM05D006200 ORTHO05D007569 2.1e-22 109.8 152 42.8
AUR62015021 Chenopodium quinoa HOM05D006200 ORTHO05D007569 2.7e-22 109.4 66 69.7
Thhalv10023849m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 2.7e-22 109.4 72 68.1
Thhalv10016039m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 3.5e-22 109.0 72 68.1
Thhalv10027363m.g Eutrema salsugineum HOM05D006200 ORTHO05D007569 7.9e-22 107.8 72 68.1
AagrBONN_evm.TU.Sc2ySwM_368.977 Anthoceros agrestis HOM05D006200 ORTHO05D007569 1.0e-21 107.5 76 61.8
CsaV3_7G002590 Cucumis sativus L. HOM05D006200 ORTHO05D007569 5.1e-21 105.1 118 51.7
SHI10134 Sapria himalayana HOM05D006200 ORTHO05D007569 8.7e-21 104.4 82 57.3
MSTRG.6639 Avicennia marina HOM05D006200 ORTHO05D007569 2.5e-20 102.8 118 49.2
Cre12.g543050 Chlamydomonas reinhardtii HOM05D006200 ORTHO05D007569 6.3e-19 98.2 150 36.0
Ah.01g013830 Amaranthus hybridus HOM05D004982 ORTHO05D007569 8.2e-19 97.8 63 66.7
Pp3c16_4930 Physcomitrium patens HOM05D006200 ORTHO05D007569 2.0e-17 93.2 105 47.6
Pp3c16_5110 Physcomitrium patens HOM05D006200 ORTHO05D007569 2.0e-17 93.2 105 47.6
Zm00001eb093000 Zea mays HOM05D006200 ORTHO05D007569 1.0e-16 90.9 152 37.5
Zm00001eb414470 Zea mays HOM05D006200 ORTHO05D007569 1.0e-16 90.9 112 45.5
MD17G1249100 Malus domestica HOM05D006200 ORTHO05D007569 7.2e-15 84.7 50 74.0
Hund21568 Selenicereus undatus HOM05D006200 ORTHO05D007569 4.6e-14 82.0 167 36.5
Aqoxy5G00520 Aquilegia oxysepala HOM05D006200 ORTHO05D007569 6.9e-10 68.2 40 67.5


User provided reference genes

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