Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_32995 Corchorus olitorius HOM05D000664 ORTHO05D000491 3.5e-52 208.0 105 100.0
COL.COLO4_32999 Corchorus olitorius HOM05D000664 ORTHO05D000491 5.2e-19 97.8 180 38.3
COL.COLO4_32998 Corchorus olitorius HOM05D000664 ORTHO05D000491 8.8e-19 97.1 192 37.5
COL.COLO4_32997 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.2e-17 92.4 176 36.9
TAR626G1797 Trochodendron aralioides HOM05D000664 ORTHO05D000491 2.7e-12 75.5 87 46.0
Duzib177G1102 Durio zibethinus HOM05D000664 ORTHO05D000491 2.6e-10 68.9 176 31.2
COL.COLO4_31801 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.3e-09 66.6 174 32.8
COL.COLO4_08939 Corchorus olitorius HOM05D000664 ORTHO05D000491 6.3e-09 64.3 172 28.5
Duzib177G1036 Durio zibethinus HOM05D000664 ORTHO05D000491 1.8e-08 62.8 171 30.4
Duzib106G0771 Durio zibethinus HOM05D000664 ORTHO05D000491 3.1e-08 62.0 166 28.3
CAN.G937.10 Capsicum annuum HOM05D000664 ORTHO05D024814 7.0e-08 60.8 83 41.0
Hma1.2p1_1404F.1_g281330 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 7.0e-08 60.8 103 36.9
COL.COLO4_37365 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.2e-07 60.1 166 28.3
COL.COLO4_08936 Corchorus olitorius HOM05D000664 ORTHO05D000491 1.6e-07 59.7 183 27.3
Rhsim01G0014100 Rhododendron simsii HOM05D000664 ORTHO05D000491 2.7e-07 58.9 147 30.6
COL.COLO4_37345 Corchorus olitorius HOM05D000664 ORTHO05D000491 3.5e-07 58.5 158 27.2
COL.COLO4_13626 Corchorus olitorius HOM05D000664 ORTHO05D000491 5.9e-07 57.8 167 27.5
Gohir.D13G165600 Gossypium hirsutum HOM05D000664 ORTHO05D000491 5.9e-07 57.8 168 29.2
Manes.14G038100 Manihot esculenta HOM05D000664 ORTHO05D000491 5.9e-07 57.8 161 28.0
CSS0008769 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 7.7e-07 57.4 167 28.1
CSS0011530 Camellia sinensis var. sinensis HOM05D000664 ORTHO05D000491 7.7e-07 57.4 167 28.1
Gohir.A13G160400 Gossypium hirsutum HOM05D000664 ORTHO05D000491 7.7e-07 57.4 168 29.2
Prupe.1G066300 Prunus persica HOM05D000664 ORTHO05D000491 7.7e-07 57.4 163 25.2
Rhsim08G0168000 Rhododendron simsii HOM05D000664 ORTHO05D000491 7.7e-07 57.4 165 29.1
Duzib106G0932 Durio zibethinus HOM05D000664 ORTHO05D000491 1.0e-06 57.0 167 29.3
Duzib106G2017 Durio zibethinus HOM05D000664 ORTHO05D000491 1.3e-06 56.6 166 27.7
PSO170G0160 Papaver somniferum HOM05D000664 ORTHO05D000491 1.3e-06 56.6 67 43.3
Rhsim01G0014000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.3e-06 56.6 137 31.4
Rhsim10G0184400 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.3e-06 56.6 177 24.9
RhsimUnG0092200 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.3e-06 56.6 164 26.8
Solyc05g051583.1 Solanum lycopersicum HOM05D000664 ORTHO05D000491 1.3e-06 56.6 53 49.1
Thecc.05G238100 Theobroma cacao HOM05D000664 ORTHO05D000491 1.3e-06 56.6 167 26.9
Gohir.A11G224210 Gossypium hirsutum HOM05D000664 ORTHO05D000491 1.7e-06 56.2 174 27.6
COL.COLO4_38550 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.3e-06 55.8 164 28.0
HanXRQChr16g0525541 Helianthus annuus HOM05D000664 ORTHO05D000491 2.3e-06 55.8 148 27.0
Peaxi162Scf00725g00213 Petunia axillaris HOM05D000664 ORTHO05D000491 2.3e-06 55.8 131 31.3
TAR626G1986 Trochodendron aralioides HOM05D000664 ORTHO05D000491 2.3e-06 55.8 171 26.3
COL.COLO4_37351 Corchorus olitorius HOM05D000664 ORTHO05D000491 2.9e-06 55.5 167 25.1
Gorai.013G197000 Gossypium raimondii HOM05D000664 ORTHO05D000491 2.9e-06 55.5 167 28.7
PGSC0003DMG400007218 Solanum tuberosum HOM05D000664 ORTHO05D000491 2.9e-06 55.5 127 32.3
COL.COLO4_38551 Corchorus olitorius HOM05D000664 ORTHO05D000491 3.8e-06 55.1 175 27.4
Duzib128G1279 Durio zibethinus HOM05D000664 ORTHO05D000491 3.8e-06 55.1 45 55.6
Duzib177G0294 Durio zibethinus HOM05D000664 ORTHO05D000491 3.8e-06 55.1 176 28.4
Duzib205G1254 Durio zibethinus HOM05D000664 ORTHO05D000491 3.8e-06 55.1 53 47.2
Gohir.D11G237600 Gossypium hirsutum HOM05D000664 ORTHO05D000491 3.8e-06 55.1 166 27.1
Gorai.007G251000 Gossypium raimondii HOM05D000664 ORTHO05D000491 3.8e-06 55.1 166 27.1
PSO063G0110 Papaver somniferum HOM05D000664 ORTHO05D000491 3.8e-06 55.1 63 42.9
PSO170G1835 Papaver somniferum HOM05D000664 ORTHO05D000491 3.8e-06 55.1 46 54.3
PSO325G0007 Papaver somniferum HOM05D000664 ORTHO05D000491 3.8e-06 55.1 46 54.3
PGSC0003DMG400021824 Solanum tuberosum HOM05D000664 ORTHO05D000491 3.8e-06 55.1 53 45.3
Ciclev10005096m.g Citrus clementina HOM05D000664 ORTHO05D000491 5.0e-06 54.7 169 27.2
FAN07G0903 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.0e-06 54.7 156 26.9
FAN17G0186 Fragaria x ananassa HOM05D000664 ORTHO05D000491 5.0e-06 54.7 156 26.3
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 6.6e-06 54.3 53 45.3
Duzib177G0364 Durio zibethinus HOM05D000664 ORTHO05D000491 6.6e-06 54.3 45 60.0
Gohir.D12G199300 Gossypium hirsutum HOM05D000664 ORTHO05D000491 6.6e-06 54.3 58 44.8
Gorai.008G214500 Gossypium raimondii HOM05D000664 ORTHO05D000491 6.6e-06 54.3 58 44.8
Potri.013G067800 Populus trichocarpa HOM05D000664 ORTHO05D000491 6.6e-06 54.3 109 35.8
PSO541G6017 Papaver somniferum HOM05D000664 ORTHO05D000491 8.6e-06 53.9 59 49.2
RhsimUnG0091800 Rhododendron simsii HOM05D000664 ORTHO05D000491 8.6e-06 53.9 121 32.2
RcHm_v2.0_Chr4g0398061 Rosa chinensis HOM05D000664 ORTHO05D000491 8.6e-06 53.9 160 28.1


User provided reference genes

Program Settings