Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 3.2e-147 525.0 259 100.0
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 1.9e-91 339.7 209 80.4
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 9.0e-89 330.9 209 78.0
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 2.4e-73 279.6 217 67.7
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 3.1e-73 279.3 217 67.7
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 1.9e-62 243.4 210 59.0
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 2.5e-62 243.0 212 57.1
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 2.3e-60 236.5 210 59.0
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 4.3e-59 232.3 210 56.2
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 1.6e-58 230.3 210 57.1
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 6.3e-58 228.4 212 54.7
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 1.1e-57 227.6 214 56.1
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 9.0e-57 224.6 212 55.2
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 3.4e-56 222.6 214 54.7
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 3.4e-56 222.6 217 54.4
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 2.5e-54 216.5 209 53.6
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 4.2e-54 215.7 242 49.6
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 9.4e-54 214.5 209 51.7
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 2.7e-53 213.0 214 52.8
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 1.0e-52 211.1 212 50.0
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 1.4e-52 210.7 213 51.2
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.8e-52 210.3 207 55.6
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 1.8e-52 210.3 209 52.2
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 3.9e-52 209.1 213 53.5
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 5.1e-52 208.8 209 52.2
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 3.3e-51 206.1 209 53.6
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 3.1e-49 199.5 212 52.4
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 3.1e-49 199.5 212 52.4
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 4.1e-49 199.1 211 52.6
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 6.9e-49 198.4 214 50.9
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 5.0e-47 192.2 233 46.4
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 8.5e-47 191.4 212 47.2
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 5.5e-46 188.7 212 47.2
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 7.2e-46 188.3 233 46.4
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 1.4e-44 184.1 211 49.3
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.0e-43 180.3 210 45.7
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 3.3e-43 179.5 209 46.9
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 9.7e-43 177.9 243 43.6
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 3.7e-42 176.0 194 49.0
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 8.2e-42 174.9 253 42.7
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.1e-41 174.5 232 43.1
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 5.3e-41 172.2 155 60.6
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 1.5e-40 170.6 235 44.7
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 3.8e-39 166.0 142 56.3
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 1.4e-38 164.1 224 41.5
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 2.5e-38 163.3 197 48.7
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 2.3e-36 156.8 234 41.0
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 1.1e-33 147.9 210 43.3
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 5.7e-27 125.6 221 36.7
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 7.5e-27 125.2 152 50.0
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 1.3e-26 124.4 244 34.4
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 3.8e-23 112.8 192 35.9
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.5e-22 110.9 175 40.6
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 3.2e-22 109.8 82 62.2
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 7.2e-22 108.6 148 45.3
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 8.0e-21 105.1 153 45.1
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 8.0e-21 105.1 153 45.1
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 3.0e-20 103.2 152 45.4
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 3.0e-20 103.2 153 43.1
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 3.4e-19 99.8 70 68.6
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 1.7e-15 87.4 147 38.1
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 2.3e-12 77.0 93 41.9
QL05p004958 Quercus lobata HOM05D008254 ORTHO05D010423 1.8e-09 67.4 93 40.9
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 2.9e-07 60.1 33 69.7


User provided reference genes

Program Settings