Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_32576 Corchorus olitorius HOM05D007211 ORTHO05D009060 2.0e-42 175.3 84 100.0
Gohir.A13G044300 Gossypium hirsutum HOM05D007211 ORTHO05D009060 3.0e-38 161.4 84 90.5
Duzib248G0207 Durio zibethinus HOM05D007211 ORTHO05D009060 1.3e-36 156.0 84 86.9
Gorai.013G048100 Gossypium raimondii HOM05D007211 ORTHO05D009060 4.9e-36 154.1 80 90.0
Gohir.D13G043400 Gossypium hirsutum HOM05D007211 ORTHO05D009060 6.4e-36 153.7 80 90.0
Thecc.02G110400 Theobroma cacao HOM05D007211 ORTHO05D009060 1.8e-35 152.1 80 90.0
CiPaw.06G168700 Carya illinoinensis HOM05D007211 ORTHO05D009060 7.0e-35 150.2 80 86.2
Eucgr.I01095 Eucalyptus grandis HOM05D007211 ORTHO05D009060 2.0e-34 148.7 80 85.0
Haze_10197 Corylus avellana HOM05D007211 ORTHO05D009060 3.0e-33 144.8 81 81.5
ClCG05G010330 Citrullus lanatus HOM05D007211 ORTHO05D009060 3.9e-33 144.4 82 79.3
PGR142G3039 Punica granatum HOM05D007211 ORTHO05D009060 3.9e-33 144.4 82 79.3
MELO3C019551.2 Cucumis melo HOM05D007211 ORTHO05D009060 5.0e-33 144.1 82 80.5
TWI31G1006 Tripterygium wilfordii HOM05D007211 ORTHO05D009060 8.6e-33 143.3 80 80.0
CANSAT25G1462 Cannabis sativa HOM05D007211 ORTHO05D009060 1.5e-32 142.5 82 79.3
CANSAT25G3598 Cannabis sativa HOM05D007211 ORTHO05D009060 1.5e-32 142.5 82 79.3
QL11p032854 Quercus lobata HOM05D007211 ORTHO05D009060 1.5e-32 142.5 81 80.2
Cpa.g.sc106.108 Carica papaya HOM05D007211 ORTHO05D009060 7.3e-32 140.2 82 76.8
Ciclev10029710m.g Citrus clementina HOM05D007211 ORTHO05D009060 7.3e-32 140.2 80 78.8
CsaV3_3G018160 Cucumis sativus L. HOM05D007211 ORTHO05D009060 7.3e-32 140.2 81 79.0
Sabra09G0072500 Salix brachista HOM05D007211 ORTHO05D009060 1.2e-31 139.4 80 83.8
TWI79G1551 Tripterygium wilfordii HOM05D007211 ORTHO05D009060 1.6e-31 139.0 80 73.8
Potri.001G299200 Populus trichocarpa HOM05D007211 ORTHO05D009060 2.1e-31 138.7 80 81.2
Potri.009G094200 Populus trichocarpa HOM05D007211 ORTHO05D009060 2.1e-31 138.7 80 82.5
Sed0014592 Sechium edule HOM05D007211 ORTHO05D009060 2.8e-31 138.3 80 77.5
MD04G1005100 Malus domestica HOM05D007211 ORTHO05D009060 4.7e-31 137.5 80 81.2
Nn1g04662 Nelumbo nucifera HOM05D007211 ORTHO05D009060 6.2e-31 137.1 80 78.8
Prupe.8G136900 Prunus persica HOM05D007211 ORTHO05D009060 8.0e-31 136.7 80 78.8
Atru.chr5.2471 Acer truncatum HOM05D007211 ORTHO05D009060 1.1e-30 136.3 80 80.0
MD00G1109400 Malus domestica HOM05D007211 ORTHO05D009060 1.4e-30 136.0 80 80.0
Hund00155 Selenicereus undatus HOM05D000364 ORTHO05D009060 1.4e-30 136.0 80 78.8
Lsat_1_v5_gn_9_112060 Lactuca sativa HOM05D007211 ORTHO05D009060 1.8e-30 135.6 80 77.5
CSS0010427 Camellia sinensis var. sinensis HOM05D007211 ORTHO05D009060 2.3e-30 135.2 80 76.2
CSS0021869 Camellia sinensis var. sinensis HOM05D007211 ORTHO05D009060 2.3e-30 135.2 80 76.2
GSVIVG01037902001 Vitis vinifera HOM05D007211 ORTHO05D009060 4.0e-30 134.4 80 76.2
Aqoxy6G02839 Aquilegia oxysepala HOM05D007211 ORTHO05D009060 5.2e-30 134.0 80 77.5
TAR376G0209 Trochodendron aralioides HOM05D007211 ORTHO05D009060 5.2e-30 134.0 82 73.2
ECA240G2095 Erigeron canadensis HOM05D007211 ORTHO05D009060 8.9e-30 133.3 80 77.5
HanXRQChr03g0068751 Helianthus annuus HOM05D007211 ORTHO05D009060 8.9e-30 133.3 80 76.2
Manes.10G075811 Manihot esculenta HOM05D007211 ORTHO05D009060 2.6e-29 131.7 80 75.0
Manes.10G076037 Manihot esculenta HOM05D007211 ORTHO05D009060 2.6e-29 131.7 80 75.0
RcHm_v2.0_Chr6g0254661 Rosa chinensis HOM05D007211 ORTHO05D009060 3.4e-29 131.3 80 77.5
RcHm_v2.0_Chr6g0254711 Rosa chinensis HOM05D007211 ORTHO05D009060 4.4e-29 131.0 80 77.5
PSO541G5220 Papaver somniferum HOM05D007211 ORTHO05D009060 7.5e-29 130.2 83 72.3
PGSC0003DMG400025763 Solanum tuberosum HOM05D007211 ORTHO05D009060 9.8e-29 129.8 80 73.8
Sopen01g049710 Solanum pennellii HOM05D007211 ORTHO05D009060 2.2e-28 128.6 80 72.5
A05p30110 Brassica napus HOM05D002228 ORTHO05D002347 3.7e-28 127.9 81 75.3
C05p45540 Brassica napus HOM05D007211 ORTHO05D009060 3.7e-28 127.9 81 75.3
BraA05t21851Z Brassica rapa HOM05D002228 ORTHO05D002347 3.7e-28 127.9 81 75.3
FvH4_2g04840 Fragaria vesca HOM05D007211 ORTHO05D009060 3.7e-28 127.9 80 75.0
FAN15G0614 Fragaria x ananassa HOM05D000062 ORTHO05D000043 3.7e-28 127.9 80 75.0
FAN24G1282 Fragaria x ananassa HOM05D000062 ORTHO05D000043 3.7e-28 127.9 80 75.0
MD05G1023600 Malus domestica HOM05D007211 ORTHO05D009060 3.7e-28 127.9 80 76.2
Hma1.2p1_1518F.1_g288450 Hydrangea macrophylla HOM05D007211 ORTHO05D009060 4.9e-28 127.5 80 72.5
BcaC05g28470 Brassica carinata HOM05D007211 ORTHO05D009060 6.4e-28 127.1 81 74.1
BolC5t33279H Brassica oleracea HOM05D007211 ORTHO05D009060 6.4e-28 127.1 81 74.1
Lj1g0022136 Lotus japonicus HOM05D007211 ORTHO05D009060 8.3e-28 126.7 80 73.8
Ca_24347_v3 Cicer arietinum L. HOM05D007211 ORTHO05D009060 1.1e-27 126.3 80 75.0
Nitab4.5_0001480g0150 Nicotiana tabacum HOM05D007211 ORTHO05D009060 1.1e-27 126.3 80 71.2
AT3G19508 Arabidopsis thaliana HOM05D007211 ORTHO05D009060 1.4e-27 125.9 81 74.1
arahy.Tifrunner.gnm1.ann1.0PG00T Arachis hypogaea HOM05D007211 ORTHO05D009060 1.4e-27 125.9 80 73.8
arahy.Tifrunner.gnm1.ann1.UEWU3Q Arachis hypogaea HOM05D007211 ORTHO05D009060 1.4e-27 125.9 80 73.8
arahy.Tifrunner.gnm1.ann1.YF4EPK Arachis hypogaea HOM05D007211 ORTHO05D009060 1.4e-27 125.9 80 73.8
CARHR094930 Cardamine hirsuta HOM05D007211 ORTHO05D009060 1.4e-27 125.9 81 72.8
Psat4g228560 Pisum sativum HOM05D007211 ORTHO05D009060 1.4e-27 125.9 80 73.8
TPR.G21608 Trifolium pratense HOM05D007211 ORTHO05D009060 1.4e-27 125.9 80 75.0
AL3G32910 Arabidopsis lyrata HOM05D007211 ORTHO05D009060 1.9e-27 125.6 81 74.1
BcaC09g48910 Brassica carinata HOM05D002228 ORTHO05D002347 1.9e-27 125.6 81 72.8
C01p44630 Brassica napus HOM05D007211 ORTHO05D009060 1.9e-27 125.6 81 72.8
BolC1t04431H Brassica oleracea HOM05D007211 ORTHO05D009060 1.9e-27 125.6 81 72.8
AUR62039062 Chenopodium quinoa HOM05D007211 ORTHO05D009060 1.9e-27 125.6 80 71.2
Migut.B00396 Erythranthe guttata HOM05D007211 ORTHO05D009060 1.9e-27 125.6 80 71.2
Actinidia34396 Actinidia chinensis HOM05D007211 ORTHO05D009060 2.4e-27 125.2 80 72.5
EL10Ac9g22259 Beta vulgaris HOM05D007211 ORTHO05D009060 3.2e-27 124.8 80 71.2
Carub.0003s1931 Capsella rubella HOM05D007211 ORTHO05D009060 3.2e-27 124.8 81 72.8
Sp3g17560 Schrenkiella parvula HOM05D007211 ORTHO05D009060 3.2e-27 124.8 81 71.6
Sc14g0001880 Simmondsia chinensis HOM05D007211 ORTHO05D009060 3.2e-27 124.8 80 66.2
BcaC09g48904 Brassica carinata HOM05D007211 ORTHO05D009060 4.1e-27 124.4 81 71.6
A01p35210 Brassica napus HOM05D007211 ORTHO05D009060 4.1e-27 124.4 81 71.6
BraA01t03602Z Brassica rapa HOM05D007211 ORTHO05D009060 4.1e-27 124.4 81 71.6
AUR62010326 Chenopodium quinoa HOM05D007211 ORTHO05D009060 4.1e-27 124.4 80 71.2
DCAR_029091 Daucus carota HOM05D007211 ORTHO05D009060 4.1e-27 124.4 82 69.5
FAN27G1079 Fragaria x ananassa HOM05D007211 ORTHO05D009060 4.1e-27 124.4 80 73.8
Medtr5g004970 Medicago truncatula HOM05D007211 ORTHO05D009060 7.0e-27 123.6 80 73.8
Oeu013758.1 Olea europaea HOM05D007211 ORTHO05D009060 1.6e-26 122.5 80 68.8
Oeu029529.1 Olea europaea HOM05D007211 ORTHO05D009060 1.6e-26 122.5 80 70.0
unitig_0.g876 Utricularia gibba HOM05D007211 ORTHO05D009060 1.6e-26 122.5 80 72.5
Aa31LG8G6260 Aethionema arabicum HOM05D007211 ORTHO05D009060 2.7e-26 121.7 81 70.4
BcaB06g26010 Brassica carinata HOM05D007211 ORTHO05D009060 2.7e-26 121.7 81 70.4
Rhsim11G0158600 Rhododendron simsii HOM05D007211 ORTHO05D009060 2.7e-26 121.7 80 70.0
Cc02_g19360 Coffea canephora HOM05D007211 ORTHO05D009060 4.6e-26 120.9 80 70.0
vmacro01995 Vaccinium macrocarpon HOM05D007211 ORTHO05D009060 4.6e-26 120.9 80 70.0
Rhsim11G0157000 Rhododendron simsii HOM05D007211 ORTHO05D009060 3.9e-25 117.9 80 67.5
Glyma.01G243800 Glycine max HOM05D007211 ORTHO05D009060 6.6e-25 117.1 80 70.0
Lalb_Chr09g0319591 Lupinus albus HOM05D007211 ORTHO05D009060 1.1e-24 116.3 80 70.0
Cfa004601 Carpinus fangiana HOM05D007211 ORTHO05D009060 7.3e-24 113.6 81 63.0
MD10G1099000 Malus domestica HOM05D007211 ORTHO05D009060 2.1e-23 112.1 83 67.5
Nitab4.5_0004326g0030 Nicotiana tabacum HOM05D007211 ORTHO05D009060 1.4e-22 109.4 66 74.2
Phvul.002G053100 Phaseolus vulgaris HOM05D007211 ORTHO05D009060 1.4e-22 109.4 80 65.0
CAN.G606.15 Capsicum annuum HOM05D007211 ORTHO05D009060 3.4e-21 104.8 65 72.3
Os01g0342800 Oryza sativa ssp. japonica HOM05D007211 ORTHO05D009060 4.9e-20 100.9 77 66.2
CDE07G1397 Ceratophyllum demersum HOM05D007211 ORTHO05D009060 7.1e-19 97.1 80 61.2
BcaB04g20701 Brassica carinata HOM05D002228 ORTHO05D002347 6.0e-18 94.0 90 52.2
Sabra16G0187800 Salix brachista HOM05D007211 ORTHO05D009060 7.8e-18 93.6 57 77.2
Zm00001eb307960 Zea mays HOM05D007211 ORTHO05D009060 6.6e-17 90.5 76 60.5
BcaC09g48905 Brassica carinata HOM05D007211 ORTHO05D009060 8.6e-17 90.1 86 55.8
BcaC09g48902 Brassica carinata HOM05D007211 ORTHO05D009060 4.3e-16 87.8 106 44.3
AagrBONN_evm.TU.Sc2ySwM_362.2090 Anthoceros agrestis HOM05D007211 ORTHO05D009060 9.5e-16 86.7 81 53.1
MBI16_g16358_MAGBIO Magnolia biondii HOM05D007211 ORTHO05D009060 1.2e-15 86.3 61 65.6
AagrBONN_evm.TU.Sc2ySwM_362.1547 Anthoceros agrestis HOM05D007211 ORTHO05D009060 4.7e-15 84.3 81 51.9
CBR_g972 Chara braunii HOM05D007211 ORTHO05D009060 1.9e-11 72.4 77 44.2
BcaC09g48907 Brassica carinata HOM05D007211 ORTHO05D009060 1.2e-10 69.7 51 62.7
Pp3c17_14820 Physcomitrium patens HOM05D007211 ORTHO05D009060 3.0e-09 65.1 66 50.0
Duzib248G0756 Durio zibethinus HOM05D007211 ORTHO05D009060 1.1e-08 63.2 49 67.3
AagrBONN_evm.TU.Sc2ySwM_344.3864 Anthoceros agrestis HOM05D007211 ORTHO05D009060 2.5e-08 62.0 59 49.2


User provided reference genes

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