Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 3.9e-73 278.1 145 100.0
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 1.9e-67 259.2 145 94.5
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.7e-66 255.4 146 92.5
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 2.7e-66 255.4 146 92.5
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.5e-66 255.0 146 92.5
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 3.5e-66 255.0 147 93.2
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 1.2e-63 246.5 147 86.4
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 1.4e-62 243.0 147 85.7
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 1.4e-62 243.0 144 87.5
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 5.2e-62 241.1 147 86.4
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 5.2e-62 241.1 147 84.4
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 5.2e-62 241.1 147 86.4
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 5.2e-62 241.1 147 85.7
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 5.2e-62 241.1 147 84.4
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 2.6e-61 238.8 147 84.4
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 5.8e-61 237.7 146 84.9
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 9.9e-61 236.9 147 85.7
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 2.9e-60 235.3 147 85.0
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 6.4e-60 234.2 146 84.2
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 6.4e-60 234.2 147 85.0
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 1.1e-59 233.4 145 84.1
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.1e-59 233.4 145 84.1
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 1.1e-59 233.4 145 84.1
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.1e-59 233.4 147 84.4
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.1e-59 233.4 147 84.4
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 1.4e-59 233.0 146 86.3
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.4e-59 233.0 145 84.1
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 2.4e-59 232.3 147 83.0
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 2.4e-59 232.3 145 83.4
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 3.2e-59 231.9 147 83.0
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 4.1e-59 231.5 147 83.7
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 7.1e-59 230.7 146 84.9
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 7.1e-59 230.7 146 84.2
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 9.2e-59 230.3 147 84.4
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 9.2e-59 230.3 146 82.2
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 1.6e-58 229.6 147 84.4
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 2.1e-58 229.2 147 82.3
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 2.7e-58 228.8 155 79.4
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 6.0e-58 227.6 147 83.0
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 1.0e-57 226.9 147 80.3
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.3e-57 226.5 147 83.0
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.3e-57 226.5 147 83.0
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.3e-57 226.5 147 83.0
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 1.7e-57 226.1 147 81.0
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.3e-57 225.7 148 81.8
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 5.1e-57 224.6 147 81.6
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 8.6e-57 223.8 147 79.6
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 8.6e-57 223.8 147 79.6
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.1e-56 223.4 148 79.7
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.1e-56 223.4 148 79.7
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 1.1e-56 223.4 147 81.6
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.1e-56 223.4 147 81.0
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 1.5e-56 223.0 147 79.6
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 2.5e-56 222.2 147 81.6
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 3.3e-56 221.9 143 80.4
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 7.3e-56 220.7 147 80.3
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 9.5e-56 220.3 149 77.9
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 9.5e-56 220.3 149 79.2
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.2e-55 219.9 145 79.3
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 1.6e-55 219.5 146 80.8
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 2.1e-55 219.2 147 78.9
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 2.1e-55 219.2 147 76.2
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 3.6e-55 218.4 146 79.5
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 4.7e-55 218.0 145 79.3
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 6.2e-55 217.6 145 78.6
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 1.1e-54 216.9 147 76.9
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 4.0e-54 214.9 147 80.3
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 5.2e-54 214.5 147 76.9
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 8.9e-54 213.8 147 78.2
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.5e-53 213.0 146 76.7
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 2.0e-53 212.6 145 80.7
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 2.0e-53 212.6 147 76.9
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 2.6e-53 212.2 139 80.6
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 3.4e-53 211.8 146 76.7
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 7.6e-53 210.7 147 76.9
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 9.9e-53 210.3 145 80.0
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 9.9e-53 210.3 145 80.0
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 1.3e-52 209.9 147 76.9
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 1.3e-52 209.9 147 76.9
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 2.9e-52 208.8 150 74.7
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 2.9e-52 208.8 147 74.8
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 1.4e-51 206.5 147 78.2
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 1.9e-51 206.1 137 79.6
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 1.9e-51 206.1 150 78.0
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 4.1e-51 204.9 147 75.5
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 5.4e-51 204.5 152 77.0
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 7.1e-51 204.1 147 74.1
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 2.7e-50 202.2 149 72.5
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 3.5e-50 201.8 147 72.8
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 3.5e-50 201.8 151 72.8
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 2.3e-49 199.1 150 71.3
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 2.3e-49 199.1 150 71.3
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 3.3e-48 195.3 152 71.1
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 1.2e-47 193.4 150 68.7
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 8.1e-47 190.7 153 69.9
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 1.1e-46 190.3 155 67.7
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 1.1e-46 190.3 158 67.7
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 1.8e-46 189.5 154 67.5
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 2.4e-46 189.1 154 68.2
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 3.1e-46 188.7 155 68.4
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 9.0e-46 187.2 147 69.4
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 2.6e-45 185.7 147 68.7
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 2.2e-44 182.6 115 82.6
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 2.1e-42 176.0 139 69.1
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 2.1e-42 176.0 139 69.1
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 3.0e-41 172.2 109 84.4
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 3.0e-41 172.2 149 63.8
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 1.5e-40 169.9 112 83.0
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 2.5e-40 169.1 152 63.8
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 5.6e-40 167.9 147 64.6
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 6.2e-39 164.5 138 69.6
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 8.1e-39 164.1 163 59.5
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 2.4e-38 162.5 147 62.6
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 3.1e-38 162.2 148 62.2
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 3.4e-37 158.7 105 79.0
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 4.5e-37 158.3 100 82.0
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 7.6e-37 157.5 146 62.3
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 1.2e-34 150.2 145 60.7
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 1.3e-31 140.2 132 62.1
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 2.1e-31 139.4 86 83.7
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 5.8e-29 131.3 153 52.3
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 3.8e-28 128.6 103 67.0
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 3.8e-28 128.6 103 67.0
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 7.1e-27 124.4 84 75.0
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 9.3e-27 124.0 152 47.4
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 1.2e-26 123.6 137 50.4
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 2.5e-24 115.9 165 47.3
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 1.3e-20 103.6 78 67.9
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 2.5e-19 99.4 79 62.0
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 3.2e-19 99.0 143 46.9
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 3.2e-19 99.0 88 62.5
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 9.3e-19 97.4 79 58.2
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.7e-18 95.9 71 67.6
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 2.7e-18 95.9 71 67.6
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 3.5e-18 95.5 71 67.6
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.0e-17 94.0 69 63.8
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.0e-17 94.0 69 66.7
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.3e-17 93.6 69 66.7
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.8e-17 93.2 69 65.2
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 5.1e-17 91.7 148 39.9
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 1.1e-16 90.5 72 69.4
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.2e-12 76.3 72 54.2
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 6.5e-12 74.7 72 54.2
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 2.7e-10 69.3 123 43.1
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 1.4e-09 67.0 70 48.6
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 7.4e-08 61.2 72 45.8
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 4.8e-07 58.5 51 62.7
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 1.1e-06 57.4 72 40.3
HPP92_014777 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.1e-06 57.4 72 43.1


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