Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 9.6e-89 330.1 162 100.0
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 1.2e-75 286.6 159 84.9
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.1e-73 280.0 161 80.1
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 3.3e-73 278.5 161 79.5
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 7.4e-73 277.3 161 79.5
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 2.0e-70 269.2 155 82.6
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 1.7e-69 266.2 154 81.8
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 1.9e-68 262.7 155 80.0
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 2.4e-68 262.3 158 77.8
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 3.2e-68 261.9 154 81.2
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 9.3e-68 260.4 165 73.3
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 1.2e-67 260.0 158 77.2
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.2e-67 260.0 158 77.2
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.1e-67 259.2 158 77.2
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.1e-67 259.2 160 77.5
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 3.5e-67 258.5 159 75.5
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 6.0e-67 257.7 154 79.9
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 7.9e-67 257.3 160 75.6
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 7.9e-67 257.3 154 79.2
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 1.3e-66 256.5 155 78.7
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 3.9e-66 255.0 160 76.2
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 3.9e-66 255.0 154 79.2
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 6.7e-66 254.2 154 77.9
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 6.7e-66 254.2 153 78.4
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 1.1e-65 253.4 153 75.8
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 1.5e-65 253.1 159 75.5
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 1.9e-65 252.7 154 77.3
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.5e-65 252.3 158 75.9
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 3.3e-65 251.9 155 76.8
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 4.3e-65 251.5 166 73.5
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 5.6e-65 251.1 157 78.3
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 5.6e-65 251.1 157 75.8
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 7.4e-65 250.8 153 76.5
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 9.6e-65 250.4 158 75.3
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 1.3e-64 250.0 159 75.5
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 2.1e-64 249.2 157 75.8
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 2.1e-64 249.2 160 72.5
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 2.8e-64 248.8 154 75.3
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 6.2e-64 247.7 154 75.3
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 3.1e-63 245.4 155 74.2
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 3.1e-63 245.4 155 74.2
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 5.3e-63 244.6 154 73.4
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 5.3e-63 244.6 152 77.6
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 5.3e-63 244.6 186 65.1
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 6.9e-63 244.2 153 75.2
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 9.0e-63 243.8 155 75.5
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.5e-62 243.0 154 73.4
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 2.0e-62 242.7 158 72.8
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 2.0e-62 242.7 158 72.8
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 4.5e-62 241.5 160 71.9
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 4.5e-62 241.5 154 73.4
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 1.0e-61 240.4 153 73.9
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 1.0e-61 240.4 152 72.4
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.7e-61 239.6 159 71.1
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 2.2e-61 239.2 157 72.6
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 3.8e-61 238.4 194 61.9
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 3.8e-61 238.4 155 73.5
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 6.5e-61 237.7 153 73.2
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 8.4e-61 237.3 155 72.9
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 1.1e-60 236.9 157 70.7
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 1.9e-60 236.1 153 72.5
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 9.3e-60 233.8 159 69.8
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 1.2e-59 233.4 153 71.9
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 1.6e-59 233.0 160 68.8
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 2.1e-59 232.6 160 68.8
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 2.7e-59 232.3 160 69.4
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 6.0e-59 231.1 152 71.1
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 7.9e-59 230.7 153 71.2
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 1.0e-58 230.3 160 67.5
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 1.3e-58 229.9 160 67.5
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.3e-58 229.2 159 67.9
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 2.3e-58 229.2 153 68.6
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 3.9e-58 228.4 155 71.0
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 6.7e-58 227.6 157 68.8
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 8.7e-58 227.3 159 66.7
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 8.7e-58 227.3 160 66.9
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 1.1e-57 226.9 164 67.7
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 3.3e-57 225.3 153 68.0
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 1.3e-56 223.4 221 53.8
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 1.6e-56 223.0 162 66.7
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 4.8e-56 221.5 173 63.0
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 6.3e-56 221.1 133 78.2
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 6.3e-56 221.1 158 65.8
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 1.8e-55 219.5 154 65.6
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 6.5e-53 211.1 150 66.7
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 2.5e-52 209.1 155 66.5
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 2.5e-52 209.1 158 65.2
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 1.9e-49 199.5 116 80.2
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 4.3e-49 198.4 125 76.0
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 2.2e-48 196.1 115 77.4
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 2.8e-48 195.7 123 73.2
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 3.7e-48 195.3 152 59.2
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.2e-45 186.0 159 59.7
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 3.2e-44 182.2 121 67.8
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.0e-41 172.9 107 77.6
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 7.4e-41 171.0 160 58.8
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 2.8e-40 169.1 109 75.2
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 6.5e-37 157.9 92 76.1
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 5.5e-36 154.8 90 74.4
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 2.6e-25 119.4 75 74.7
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 5.7e-25 118.2 155 41.9
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 3.6e-19 99.0 98 53.1
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 2.6e-17 92.8 71 69.0
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 1.7e-16 90.1 80 66.2
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 7.0e-15 84.7 53 75.5
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 1.0e-10 70.9 70 48.6


User provided reference genes

Program Settings