Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_32221 Corchorus olitorius HOM05D000248 ORTHO05D000146 2.5e-43 178.3 86 100.0
Thecc.05G235800 Theobroma cacao HOM05D000248 ORTHO05D000146 1.4e-17 92.8 82 57.3
COL.COLO4_32223 Corchorus olitorius HOM05D000248 ORTHO05D000146 3.0e-17 91.7 48 87.5
Gohir.A12G178000 Gossypium hirsutum HOM05D000248 ORTHO05D000146 1.7e-15 85.9 52 73.1
Gohir.D12G180400 Gossypium hirsutum HOM05D000248 ORTHO05D000146 1.7e-15 85.9 52 73.1
Gorai.008G193600 Gossypium raimondii HOM05D000248 ORTHO05D000146 1.7e-15 85.9 52 73.1
Thecc.05G235700 Theobroma cacao HOM05D000248 ORTHO05D000146 8.3e-15 83.6 48 79.2
Dinv43516 Davidia involucrata HOM05D000248 ORTHO05D000146 1.4e-14 82.8 55 67.3
Duzib177G0628 Durio zibethinus HOM05D000248 ORTHO05D000146 1.4e-14 82.8 50 74.0
Haze_23241 Corylus avellana HOM05D000009 ORTHO05D000008 1.8e-14 82.4 85 50.6
Cc02_g26520 Coffea canephora HOM05D000248 ORTHO05D000146 9.1e-14 80.1 47 76.6
GSVIVG01019353001 Vitis vinifera HOM05D000248 ORTHO05D000146 1.2e-13 79.7 55 65.5
Duzib177G0069 Durio zibethinus HOM05D000248 ORTHO05D000146 2.0e-13 79.0 50 70.0
Duzib177G0556 Durio zibethinus HOM05D000248 ORTHO05D000146 2.0e-13 79.0 53 66.0
Duzib106G0480 Durio zibethinus HOM05D000248 ORTHO05D000146 2.7e-13 78.6 53 67.9
Atru.chr2.1626 Acer truncatum HOM05D000248 ORTHO05D000146 3.5e-13 78.2 52 67.3
CSS0037488 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 3.5e-13 78.2 61 54.1
CSS0037719 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 3.5e-13 78.2 61 54.1
Hma1.2p1_1208F.1_g267050 Hydrangea macrophylla HOM05D000248 ORTHO05D000146 3.5e-13 78.2 46 73.9
Cfa009871 Carpinus fangiana HOM05D000248 ORTHO05D000146 4.5e-13 77.8 52 67.3
CSS0015990 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 7.7e-13 77.0 52 65.4
CSS0036060 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 1.3e-12 76.3 64 50.0
CiPaw.13G150100 Carya illinoinensis HOM05D000248 ORTHO05D000146 1.7e-12 75.9 47 70.2
Cfa009866 Carpinus fangiana HOM05D000009 ORTHO05D000146 2.9e-12 75.1 52 65.4
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 5.0e-12 74.3 52 61.5
Cfa009874 Carpinus fangiana HOM05D000248 ORTHO05D000146 5.0e-12 74.3 52 61.5
CSS0017915 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 6.6e-12 73.9 48 70.8
QL04p053566 Quercus lobata HOM05D000248 ORTHO05D000146 6.6e-12 73.9 48 64.6
COL.COLO4_21823 Corchorus olitorius HOM05D000248 ORTHO05D000146 1.1e-11 73.2 55 63.6
Cfa009876 Carpinus fangiana HOM05D000248 ORTHO05D000146 2.5e-11 72.0 47 66.0
Cfa014939 Carpinus fangiana HOM05D000009 ORTHO05D000146 3.3e-11 71.6 52 63.5
Haze_23240 Corylus avellana HOM05D000009 ORTHO05D010531 3.3e-11 71.6 52 61.5
AUR62014486 Chenopodium quinoa HOM05D000248 ORTHO05D000146 1.6e-10 69.3 55 56.4
Cfa009877 Carpinus fangiana HOM05D000248 ORTHO05D000146 2.8e-10 68.6 52 59.6
PGR042G2403 Punica granatum HOM05D000248 ORTHO05D000146 2.8e-10 68.6 46 67.4
Cfa009870 Carpinus fangiana HOM05D000009 ORTHO05D000146 3.6e-10 68.2 52 57.7
EL10Ac1g00624 Beta vulgaris HOM05D000248 ORTHO05D000146 1.4e-09 66.2 52 57.7
Cc02_g26550 Coffea canephora HOM05D000248 ORTHO05D000146 1.4e-09 66.2 52 51.9
RcHm_v2.0_Chr2g0136311 Rosa chinensis HOM05D000248 ORTHO05D000146 1.8e-09 65.9 52 55.8
FvH4_6g30090 Fragaria vesca HOM05D000248 ORTHO05D000146 2.3e-09 65.5 52 57.7
FAN14G0723 Fragaria x ananassa HOM05D000248 ORTHO05D000146 2.3e-09 65.5 52 57.7
Ah.02g123560 Amaranthus hybridus HOM05D000248 ORTHO05D000146 4.0e-09 64.7 47 61.7
Sc02g0005710 Simmondsia chinensis HOM05D000248 ORTHO05D000146 4.0e-09 64.7 48 64.6
Cfa011420 Carpinus fangiana HOM05D000248 ORTHO05D000146 1.2e-08 63.2 67 43.3
AUR62008254 Chenopodium quinoa HOM05D000248 ORTHO05D000146 1.2e-08 63.2 55 54.5
DCAR_015730 Daucus carota HOM05D000248 ORTHO05D000146 1.2e-08 63.2 44 59.1
Sc02g0005890 Simmondsia chinensis HOM05D000248 ORTHO05D000146 1.5e-08 62.8 48 62.5
Aqoxy4G00216 Aquilegia oxysepala HOM05D000248 ORTHO05D000146 2.0e-08 62.4 63 41.3
RhsimUnG0089300 Rhododendron simsii HOM05D000248 ORTHO05D000146 2.0e-08 62.4 52 46.2
CiPaw.09G078400 Carya illinoinensis HOM05D000248 ORTHO05D000146 2.6e-08 62.0 68 39.7
Ciclev10032829m.g Citrus clementina HOM05D000248 ORTHO05D000146 2.6e-08 62.0 49 59.2
AUR62034512 Chenopodium quinoa HOM05D000248 ORTHO05D000146 3.4e-08 61.6 47 59.6
Rhsim13G0131500 Rhododendron simsii HOM05D000248 ORTHO05D000146 3.4e-08 61.6 52 46.2
Actinidia22390 Actinidia chinensis HOM05D000248 ORTHO05D000146 4.4e-08 61.2 48 50.0
vmacro03508 Vaccinium macrocarpon HOM05D000248 ORTHO05D000146 4.4e-08 61.2 52 44.2
Haze_23999 Corylus avellana HOM05D000248 ORTHO05D000146 5.7e-08 60.8 57 50.9
MD17G1184600 Malus domestica HOM05D000248 ORTHO05D000146 5.7e-08 60.8 54 53.7
Prupe.3G082500 Prunus persica HOM05D000248 ORTHO05D000146 5.7e-08 60.8 52 48.1
QL11p018028 Quercus lobata HOM05D000248 ORTHO05D000146 5.7e-08 60.8 48 52.1
CSS0043860 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 7.5e-08 60.5 47 51.1
DCAR_004324 Daucus carota HOM05D000248 ORTHO05D000146 7.5e-08 60.5 46 52.2
MBI01_g44880_MAGBIO Magnolia biondii HOM05D000248 ORTHO05D000146 7.5e-08 60.5 48 47.9
TAR627G0212 Trochodendron aralioides HOM05D000248 ORTHO05D000146 7.5e-08 60.5 48 52.1
Cfa017672 Carpinus fangiana HOM05D000248 ORTHO05D000146 1.3e-07 59.7 46 54.3
Hund23500 Selenicereus undatus HOM05D000248 ORTHO05D000146 1.3e-07 59.7 62 40.3
Duzib235G1290 Durio zibethinus HOM05D000248 ORTHO05D000146 1.7e-07 59.3 51 49.0
Eucgr.E01883 Eucalyptus grandis HOM05D000248 ORTHO05D000146 1.7e-07 59.3 53 41.5
Eucgr.E01887 Eucalyptus grandis HOM05D000248 ORTHO05D000146 1.7e-07 59.3 51 41.2
SGA_v2.0_scaffold298G47681 Striga asiatica HOM05D000248 ORTHO05D000146 1.7e-07 59.3 52 42.3
Haze_06029 Corylus avellana HOM05D000248 ORTHO05D000146 2.2e-07 58.9 46 50.0
CiPaw.09G078600 Carya illinoinensis HOM05D000248 ORTHO05D000146 2.8e-07 58.5 48 47.9
Oeu050057.1 Olea europaea HOM05D000248 ORTHO05D000146 2.8e-07 58.5 48 45.8
TWI38G2162 Tripterygium wilfordii HOM05D000248 ORTHO05D000146 2.8e-07 58.5 48 50.0
Ciclev10016359m.g Citrus clementina HOM05D000248 ORTHO05D000146 3.7e-07 58.2 48 50.0
vmacro03512 Vaccinium macrocarpon HOM05D000248 ORTHO05D000146 3.7e-07 58.2 52 42.3
Aqoxy1G01476 Aquilegia oxysepala HOM05D002966 ORTHO05D003274 4.9e-07 57.8 48 47.9
Eucgr.E01960 Eucalyptus grandis HOM05D000248 ORTHO05D000146 6.3e-07 57.4 51 41.2
Cfa000721 Carpinus fangiana HOM05D000248 ORTHO05D000146 8.3e-07 57.0 46 50.0
CiPaw.09G078500 Carya illinoinensis HOM05D000248 ORTHO05D000146 8.3e-07 57.0 48 45.8
Lsat_1_v5_gn_5_36381 Lactuca sativa HOM05D000248 ORTHO05D000146 8.3e-07 57.0 68 39.7
SalBow8G2337 Salvia bowleyana HOM05D000248 ORTHO05D000146 8.3e-07 57.0 48 45.8
SalBow8G3348 Salvia bowleyana HOM05D000248 ORTHO05D000146 8.3e-07 57.0 48 45.8
GSVIVG01019344001 Vitis vinifera HOM05D000248 ORTHO05D000146 8.3e-07 57.0 55 43.6
Migut.M01974 Erythranthe guttata HOM05D000248 ORTHO05D000146 1.1e-06 56.6 48 45.8
Eucgr.E01885 Eucalyptus grandis HOM05D000248 ORTHO05D000146 1.1e-06 56.6 57 36.8
Gorai.010G237200 Gossypium raimondii HOM05D000248 ORTHO05D000146 1.1e-06 56.6 71 38.0
MD05G1254200 Malus domestica HOM05D000248 ORTHO05D000146 1.1e-06 56.6 41 56.1
CDE02G1336 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 1.4e-06 56.2 46 50.0
PGR042G3762 Punica granatum HOM05D000248 ORTHO05D000146 1.4e-06 56.2 48 45.8
Cfa011419 Carpinus fangiana HOM05D000248 ORTHO05D000146 1.8e-06 55.8 57 47.4
Cfa011422 Carpinus fangiana HOM05D000248 ORTHO05D000146 1.8e-06 55.8 57 47.4
Lj1C1144T7 Lonicera japonica HOM05D000248 ORTHO05D000146 1.8e-06 55.8 46 43.5
RcHm_v2.0_Chr2g0136161 Rosa chinensis HOM05D000248 ORTHO05D000146 1.8e-06 55.8 63 41.3
Eucgr.E01891 Eucalyptus grandis HOM05D000248 ORTHO05D000146 2.4e-06 55.5 51 39.2
Gohir.D06G203300 Gossypium hirsutum HOM05D000248 ORTHO05D000146 2.4e-06 55.5 71 38.0
Hma1.2p1_0040F.1_g025210 Hydrangea macrophylla HOM05D000248 ORTHO05D000146 2.4e-06 55.5 51 39.2
Nitab4.5_0003773g0020 Nicotiana tabacum HOM05D000248 ORTHO05D000146 2.4e-06 55.5 54 42.6
GSVIVG01012084001 Vitis vinifera HOM05D000248 ORTHO05D000146 2.4e-06 55.5 48 41.7
CDE02G1016 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 3.1e-06 55.1 46 50.0
CDE02G3305 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 3.1e-06 55.1 46 50.0
COL.COLO4_30983 Corchorus olitorius HOM05D000248 ORTHO05D000146 3.1e-06 55.1 48 50.0
MSTRG.16340 Avicennia marina HOM05D000248 ORTHO05D000146 4.1e-06 54.7 48 45.8
CDE02G0958 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 4.1e-06 54.7 46 47.8
CDE02G3668 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 4.1e-06 54.7 46 47.8
Eucgr.E01962 Eucalyptus grandis HOM05D000248 ORTHO05D000146 4.1e-06 54.7 59 32.2
Manes.03G070740 Manihot esculenta HOM05D000248 ORTHO05D000146 4.1e-06 54.7 46 50.0
Nitab4.5_0002056g0070 Nicotiana tabacum HOM05D000248 ORTHO05D000146 4.1e-06 54.7 54 42.6
Aqoxy5G03128 Aquilegia oxysepala HOM05D000248 ORTHO05D000146 5.4e-06 54.3 48 52.1
EL10Ac8g20003 Beta vulgaris HOM05D000248 ORTHO05D000146 5.4e-06 54.3 41 46.3
Gohir.A06G195800 Gossypium hirsutum HOM05D000248 ORTHO05D000146 5.4e-06 54.3 58 43.1
Aqoxy4G01029 Aquilegia oxysepala HOM05D000248 ORTHO05D000146 7.0e-06 53.9 63 38.1
CDE05G1262 Ceratophyllum demersum HOM05D000248 ORTHO05D000146 7.0e-06 53.9 66 39.4
Ah.09g235220 Amaranthus hybridus HOM05D000248 ORTHO05D000146 9.2e-06 53.5 47 40.4
ClCG01G009230 Citrullus lanatus HOM05D000248 ORTHO05D000146 9.2e-06 53.5 46 41.3
Thecc.06G141400 Theobroma cacao HOM05D000248 ORTHO05D000146 9.2e-06 53.5 51 43.1


User provided reference genes

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