Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 5.8e-118 427.6 215 100.0
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 3.1e-42 176.0 211 49.3
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 6.2e-35 151.8 219 43.4
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 8.4e-32 141.4 211 41.2
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 3.5e-30 136.0 211 40.3
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 3.5e-30 136.0 211 40.3
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 1.4e-26 124.0 213 38.5
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 5.2e-26 122.1 211 37.4
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 1.3e-24 117.5 216 36.6
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 6.4e-24 115.2 137 46.7
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 8.4e-24 114.8 215 39.1
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 8.4e-24 114.8 211 37.9
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.1e-23 114.4 213 37.6
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 1.4e-23 114.0 215 36.7
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 4.2e-23 112.5 213 36.6
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 5.4e-23 112.1 212 38.2
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 2.5e-20 103.2 212 35.4
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 4.3e-20 102.4 212 33.0
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 4.3e-20 102.4 211 35.1
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 5.6e-20 102.1 212 34.4
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 7.3e-20 101.7 214 34.6
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 1.3e-19 100.9 211 35.1
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 4.8e-19 99.0 211 32.7
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 4.8e-19 99.0 214 32.7
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 6.2e-19 98.6 211 31.8
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 1.4e-18 97.4 74 64.9
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 1.4e-18 97.4 74 70.3
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.8e-18 97.1 74 66.2
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 2.4e-18 96.7 210 34.8
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 3.1e-18 96.3 211 33.2
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 4.0e-18 95.9 211 33.6
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 6.9e-18 95.1 213 29.6
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 1.5e-17 94.0 209 33.5
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 2.0e-17 93.6 211 32.2
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 4.5e-17 92.4 222 31.5
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 7.6e-17 91.7 74 59.5
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 2.9e-16 89.7 207 33.3
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 2.9e-16 89.7 75 60.0
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 3.8e-16 89.4 218 32.1
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 1.1e-15 87.8 174 31.6
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 1.1e-15 87.8 75 58.7
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.9e-15 87.0 74 58.1
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 1.9e-15 87.0 218 31.7
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 2.4e-15 86.7 218 31.7
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 3.2e-15 86.3 172 32.6
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 4.2e-15 85.9 215 29.3
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 5.4e-15 85.5 216 31.5
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 7.1e-15 85.1 74 56.8
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 1.2e-14 84.3 174 30.5
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 1.6e-14 84.0 175 33.1
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 3.5e-14 82.8 74 52.7
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 4.6e-14 82.4 215 28.8
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 6.0e-14 82.0 220 32.3
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 1.0e-13 81.3 172 32.0
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 1.3e-13 80.9 177 29.9
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 8.7e-13 78.2 212 28.3
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 1.1e-12 77.8 71 50.7
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 2.5e-12 76.6 216 28.7
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 2.5e-12 76.6 75 52.0
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 2.5e-12 76.6 75 52.0
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 2.5e-12 76.6 75 52.0
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 2.5e-12 76.6 74 50.0
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 5.6e-12 75.5 74 52.7
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 5.6e-12 75.5 75 50.7
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 5.6e-12 75.5 78 50.0
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 9.6e-12 74.7 206 25.7
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 9.6e-12 74.7 73 43.8
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 1.6e-11 73.9 76 51.3
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 1.6e-11 73.9 76 51.3
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 1.6e-11 73.9 76 51.3
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 1.6e-11 73.9 76 51.3
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 2.1e-11 73.6 75 52.0
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 4.8e-11 72.4 72 51.4
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 4.8e-11 72.4 78 52.6
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 4.8e-11 72.4 78 52.6
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 4.8e-11 72.4 75 53.3
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 6.2e-11 72.0 73 47.9
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 1.1e-10 71.2 211 28.9
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 1.4e-10 70.9 74 51.4
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 1.4e-10 70.9 195 31.8
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 2.4e-10 70.1 78 50.0
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 3.1e-10 69.7 75 49.3
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 4.0e-10 69.3 78 52.6
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 5.3e-10 68.9 74 45.9
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 1.2e-09 67.8 75 48.0
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 1.2e-09 67.8 74 47.3
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 3.4e-09 66.2 70 41.4
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 4.5e-09 65.9 74 47.3
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 5.8e-09 65.5 204 26.0
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 9.9e-09 64.7 81 45.7
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 9.9e-09 64.7 74 41.9
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 2.9e-08 63.2 216 27.8
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 1.1e-07 61.2 74 43.2
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 7.9e-06 55.1 168 31.0
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 7.9e-06 55.1 64 46.9


User provided reference genes

Program Settings