Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_31764 Corchorus olitorius HOM05D007467 ORTHO05D009441 1.1e-96 356.7 183 100.0
Thecc.06G219700 Theobroma cacao HOM05D002166 ORTHO05D002634 5.6e-21 105.1 330 33.9
Duzib192G0684 Durio zibethinus HOM05D002166 ORTHO05D002634 1.5e-13 80.5 339 30.7
Gorai.011G014500 Gossypium raimondii HOM05D002166 ORTHO05D002634 6.3e-12 75.1 334 28.4
Gohir.D10G012800 Gossypium hirsutum HOM05D002166 ORTHO05D002634 8.2e-12 74.7 334 28.7
Sed0003279 Sechium edule HOM05D002166 ORTHO05D002634 1.5e-10 70.5 181 37.0
Hma1.2p1_2464F.1_g322600 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 1.3e-09 67.4 319 27.9
Hma1.2p1_3160F.1_g333440 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 1.3e-09 67.4 319 27.9
GSVIVG01037646001 Vitis vinifera HOM05D002166 ORTHO05D002634 1.3e-09 67.4 294 27.2
TAR626G0812 Trochodendron aralioides HOM05D002166 ORTHO05D002634 1.7e-09 67.0 337 25.5
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 6.5e-09 65.1 178 32.6
Hma1.2p1_0673F.1_g201340 Hydrangea macrophylla HOM05D002166 ORTHO05D002634 6.5e-09 65.1 328 27.1
Nn1g03540 Nelumbo nucifera HOM05D002166 ORTHO05D002634 6.5e-09 65.1 338 25.1
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 1.1e-08 64.3 182 29.7
MBI02_g24810_MAGBIO Magnolia biondii HOM05D002166 ORTHO05D002634 1.4e-08 63.9 323 27.9
ATR0752G109 Amborella trichopoda HOM05D002166 ORTHO05D002634 3.2e-08 62.8 319 27.6
CsaV3_6G049090 Cucumis sativus L. HOM05D002166 ORTHO05D002634 7.2e-08 61.6 232 31.0
Rhsim06G0216800 Rhododendron simsii HOM05D002166 ORTHO05D002634 7.2e-08 61.6 51 52.9
CSS0020014 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 9.4e-08 61.2 327 25.7
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 1.2e-07 60.8 181 29.3
TAR624G1431 Trochodendron aralioides HOM05D002166 ORTHO05D002634 1.2e-07 60.8 338 27.2
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 2.1e-07 60.1 190 29.5
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 2.1e-07 60.1 179 31.8
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 2.1e-07 60.1 182 29.7
vmacro11726 Vaccinium macrocarpon HOM05D002166 ORTHO05D002634 2.1e-07 60.1 51 51.0
Manes.03G129200 Manihot esculenta HOM05D002166 ORTHO05D002634 2.7e-07 59.7 336 26.5
ClCG01G022030 Citrullus lanatus HOM05D002166 ORTHO05D002634 4.6e-07 58.9 228 30.7
Dinv13887 Davidia involucrata HOM05D002166 ORTHO05D002634 4.6e-07 58.9 140 32.9
Psat1g181320 Pisum sativum HOM05D002166 ORTHO05D002634 4.6e-07 58.9 195 30.8
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 7.9e-07 58.2 185 29.7
MELO3C007386.2 Cucumis melo HOM05D002166 ORTHO05D002634 1.0e-06 57.8 233 30.5
TWI38G0482 Tripterygium wilfordii HOM05D002166 ORTHO05D002634 1.0e-06 57.8 337 27.0
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 1.4e-06 57.4 181 30.9
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.8e-06 57.0 178 28.7
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.8e-06 57.0 178 28.7
Manes.15G072000 Manihot esculenta HOM05D002166 ORTHO05D002634 2.3e-06 56.6 336 25.9
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 2.3e-06 56.6 180 29.4
Aqoxy1G02169 Aquilegia oxysepala HOM05D002166 ORTHO05D002634 3.0e-06 56.2 355 23.9
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 3.0e-06 56.2 179 31.8
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 3.0e-06 56.2 179 31.8
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 3.0e-06 56.2 178 27.5
PSO541G1388 Papaver somniferum HOM05D002166 ORTHO05D002634 3.0e-06 56.2 337 26.1
Ciclev10007979m.g Citrus clementina HOM05D002166 ORTHO05D002634 3.9e-06 55.8 337 24.9
Aa31LG10G3670 Aethionema arabicum HOM05D002166 ORTHO05D002634 5.1e-06 55.5 156 33.3
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 5.1e-06 55.5 185 29.2
Migut.H01828 Erythranthe guttata HOM05D002166 ORTHO05D002634 5.1e-06 55.5 306 26.5
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 5.1e-06 55.5 182 29.1
QL05p073305 Quercus lobata HOM05D002166 ORTHO05D002634 5.1e-06 55.5 307 27.7
Sed0003496 Sechium edule HOM05D002166 ORTHO05D002634 6.7e-06 55.1 202 31.2
Zm00001eb150970 Zea mays HOM05D002166 ORTHO05D002634 6.7e-06 55.1 48 66.7
A06p02960 Brassica napus HOM05D002166 ORTHO05D002634 8.8e-06 54.7 303 27.1
BraA06t23502Z Brassica rapa HOM05D002166 ORTHO05D002634 8.8e-06 54.7 303 27.1
Duzib268G1828 Durio zibethinus HOM05D002166 ORTHO05D002634 8.8e-06 54.7 338 24.0
Eucgr.F00765 Eucalyptus grandis HOM05D002166 ORTHO05D002634 8.8e-06 54.7 169 26.6
Gohir.D01G066400 Gossypium hirsutum HOM05D002166 ORTHO05D002634 8.8e-06 54.7 336 25.3
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 8.8e-06 54.7 178 28.1
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 8.8e-06 54.7 178 28.1
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 8.8e-06 54.7 178 30.3


User provided reference genes

Program Settings