Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_31448 Corchorus olitorius HOM05D000761 ORTHO05D158754 6.5e-64 247.7 169 100.0
FAN01G0612 Fragaria x ananassa HOM05D000761 ORTHO05D001062 1.9e-18 96.7 71 69.0
Potri.010G185300 Populus trichocarpa HOM05D000761 ORTHO05D001062 5.4e-18 95.1 71 67.6
Medtr3g071480 Medicago truncatula HOM05D000761 ORTHO05D001062 7.0e-18 94.7 72 63.9
FAN10G1767 Fragaria x ananassa HOM05D000761 ORTHO05D001062 9.2e-18 94.4 71 67.6
Lj6g0009042 Lotus japonicus HOM05D000761 ORTHO05D001062 4.6e-17 92.0 72 63.9
Phvul.001G245300 Phaseolus vulgaris HOM05D000761 ORTHO05D001062 6.0e-17 91.7 71 63.4
Psat5g131240 Pisum sativum HOM05D000761 ORTHO05D001062 1.3e-16 90.5 72 62.5
Glyma.11G232200 Glycine max HOM05D000761 ORTHO05D001062 1.7e-16 90.1 71 60.6
Lalb_Chr11g0075061 Lupinus albus HOM05D000761 ORTHO05D001062 2.3e-16 89.7 70 62.9
Sabra10G0142500 Salix brachista HOM05D000761 ORTHO05D001062 5.1e-16 88.6 70 62.9
Glyma.18G025100 Glycine max HOM05D000761 ORTHO05D001062 2.5e-15 86.3 71 60.6
Glyma.02G263900 Glycine max HOM05D000761 ORTHO05D001062 1.2e-14 84.0 70 58.6
Ca_15148_v3 Cicer arietinum L. HOM05D000761 ORTHO05D001062 2.8e-14 82.8 72 58.3
TPR.G38384 Trifolium pratense HOM05D000761 ORTHO05D001062 2.8e-14 82.8 73 60.3
COL.COLO4_34904 Corchorus olitorius HOM05D000761 ORTHO05D163246 6.2e-14 81.6 56 76.8
FAN03G2092 Fragaria x ananassa HOM05D000761 ORTHO05D001062 8.1e-14 81.3 71 60.6
arahy.Tifrunner.gnm1.ann1.F33GX9 Arachis hypogaea HOM05D000761 ORTHO05D001062 2.3e-13 79.7 70 61.4
Lj6g0011027 Lotus japonicus HOM05D000761 ORTHO05D001062 5.2e-13 78.6 71 57.7
Glyma.02G229500 Glycine max HOM05D000761 ORTHO05D001062 8.9e-13 77.8 70 57.1
COL.COLO4_31167 Corchorus olitorius HOM05D002794 ORTHO05D158358 2.0e-12 76.6 47 80.9
Lalb_Chr23g0277051 Lupinus albus HOM05D000761 ORTHO05D001062 2.0e-12 76.6 71 59.2
Psat2g030800 Pisum sativum HOM05D000761 ORTHO05D001062 4.4e-12 75.5 72 55.6
Rhsim03G0145900 Rhododendron simsii HOM05D000761 ORTHO05D001062 1.7e-11 73.6 71 57.7
Gorai.010G195700 Gossypium raimondii HOM05D000761 ORTHO05D001062 2.2e-11 73.2 47 74.5
Sed0021224 Sechium edule HOM05D000761 ORTHO05D001062 8.3e-11 71.2 71 54.9
Glyma.18G059600 Glycine max HOM05D000761 ORTHO05D001062 4.1e-10 68.9 71 52.1
Glyma.11G167100 Glycine max HOM05D000761 ORTHO05D001062 5.4e-10 68.6 71 50.7
AUR62022928 Chenopodium quinoa HOM05D000761 ORTHO05D001062 2.7e-09 66.2 72 50.0
TWI31G0256 Tripterygium wilfordii HOM05D000761 ORTHO05D001062 2.7e-09 66.2 51 62.7
FvH4_7g24950 Fragaria vesca HOM05D000761 ORTHO05D001062 6.0e-09 65.1 71 50.7
FAN06G4811 Fragaria x ananassa HOM05D000761 ORTHO05D001062 6.0e-09 65.1 71 50.7
RcHm_v2.0_Chr1g0370831 Rosa chinensis HOM05D000761 ORTHO05D001062 6.0e-09 65.1 48 68.8
EL10Ac2g04879 Beta vulgaris HOM05D000761 ORTHO05D001062 1.0e-08 64.3 65 50.8
AUR62012287 Chenopodium quinoa HOM05D000761 ORTHO05D001062 1.0e-08 64.3 72 50.0
Sabra08G0053300 Salix brachista HOM05D000761 ORTHO05D001062 1.3e-08 63.9 44 70.5
Ciclev10030902m.g Citrus clementina HOM05D000761 ORTHO05D001062 3.0e-08 62.8 44 68.2
Potri.008G072100 Populus trichocarpa HOM05D000761 ORTHO05D001062 3.0e-08 62.8 42 71.4
Hund05041 Selenicereus undatus HOM05D000761 ORTHO05D001062 3.0e-08 62.8 79 44.3
Thhalv10015840m.g Eutrema salsugineum HOM05D000761 ORTHO05D001062 6.6e-08 61.6 57 49.1
SHI19190 Sapria himalayana HOM05D000761 ORTHO05D001062 8.6e-08 61.2 46 69.6
Cpa.g.sc2.392 Carica papaya HOM05D000761 ORTHO05D001062 1.5e-07 60.5 49 61.2
TAR633G2782 Trochodendron aralioides HOM05D000761 ORTHO05D001062 1.9e-07 60.1 46 65.2
Manes.10G009600 Manihot esculenta HOM05D000761 ORTHO05D001062 2.5e-07 59.7 44 68.2
Sed0019611 Sechium edule HOM05D000761 ORTHO05D001062 3.3e-07 59.3 64 51.6
Prupe.2G254500 Prunus persica HOM05D000761 ORTHO05D001062 5.6e-07 58.5 42 71.4
COL.COLO4_25777 Corchorus olitorius HOM05D000761 ORTHO05D001062 7.3e-07 58.2 41 70.7
TPR.G30160 Trifolium pratense HOM05D000761 ORTHO05D001062 1.2e-06 57.4 42 66.7
Manes.07G132800 Manihot esculenta HOM05D000761 ORTHO05D001062 3.6e-06 55.8 39 71.8
Manes.05G014704 Manihot esculenta HOM05D000761 ORTHO05D022902 4.7e-06 55.5 41 70.7
Manes.11G152091 Manihot esculenta HOM05D000761 ORTHO05D001062 4.7e-06 55.5 41 70.7
Manes.11G152182 Manihot esculenta HOM05D000761 ORTHO05D022902 4.7e-06 55.5 41 70.7
arahy.Tifrunner.gnm1.ann1.51P7XV Arachis hypogaea HOM05D000761 ORTHO05D001062 8.1e-06 54.7 37 67.6
Lalb_Chr08g0231551 Lupinus albus HOM05D000761 ORTHO05D001062 8.1e-06 54.7 44 61.4
Nn2g10955 Nelumbo nucifera HOM05D000761 ORTHO05D001062 8.1e-06 54.7 48 60.4


User provided reference genes

Program Settings