Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_31431 Corchorus olitorius HOM05D000233 ORTHO05D000020 6.2e-24 113.2 55 100.0
Thecc.06G182900 Theobroma cacao HOM05D000233 ORTHO05D000020 7.4e-17 89.7 55 81.8
Duzib192G0130 Durio zibethinus HOM05D000233 ORTHO05D000020 4.8e-16 87.0 55 81.8
Duzib235G1008 Durio zibethinus HOM05D000233 ORTHO05D000020 5.3e-15 83.6 55 80.0
Gohir.A10G027400 Gossypium hirsutum HOM05D000233 ORTHO05D000020 1.0e-13 79.3 55 72.7
Gohir.D10G027800 Gossypium hirsutum HOM05D000233 ORTHO05D000020 1.0e-13 79.3 55 72.7
Gorai.011G029700 Gossypium raimondii HOM05D000233 ORTHO05D000020 1.0e-13 79.3 55 72.7
Atru.chr10.1812 Acer truncatum HOM05D000233 ORTHO05D000020 1.0e-10 69.3 58 63.8
Ciclev10016982m.g Citrus clementina HOM05D000233 ORTHO05D000020 2.3e-10 68.2 55 60.0
CiPaw.10G051700 Carya illinoinensis HOM05D000233 ORTHO05D000020 1.9e-09 65.1 49 63.3
Manes.16G030400 Manihot esculenta HOM05D000233 ORTHO05D000020 9.7e-09 62.8 58 56.9
Potri.004G047500 Populus trichocarpa HOM05D000233 ORTHO05D000020 1.3e-08 62.4 61 54.1
Sabra04G0029700 Salix brachista HOM05D000233 ORTHO05D000020 1.3e-08 62.4 61 52.5
Hma1.2p1_0208F.1_g088400 Hydrangea macrophylla HOM05D000233 ORTHO05D000020 8.2e-08 59.7 38 73.7
CANSAT35G0645 Cannabis sativa HOM05D000233 ORTHO05D000020 1.8e-07 58.5 32 78.1
Manes.17G048200 Manihot esculenta HOM05D000233 ORTHO05D000020 1.8e-07 58.5 56 55.4
CSS0010538 Camellia sinensis var. sinensis HOM05D000233 ORTHO05D000020 2.4e-07 58.2 37 62.2
QL05p041994 Quercus lobata HOM05D000233 ORTHO05D000020 2.4e-07 58.2 61 52.5
Cfa000514 Carpinus fangiana HOM05D000233 ORTHO05D000020 3.1e-07 57.8 40 62.5
CiPaw.09G062600 Carya illinoinensis HOM05D000233 ORTHO05D000020 5.3e-07 57.0 59 50.8
Nitab4.5_0008414g0010 Nicotiana tabacum HOM05D000233 ORTHO05D000020 5.3e-07 57.0 38 73.7
DCAR_004054 Daucus carota HOM05D000233 ORTHO05D000020 6.9e-07 56.6 37 67.6
Potri.011G056900 Populus trichocarpa HOM05D000233 ORTHO05D000020 6.9e-07 56.6 51 58.8
Oeu027695.1 Olea europaea HOM05D000233 ORTHO05D000020 9.0e-07 56.2 51 60.8
Haze_06397 Corylus avellana HOM05D000233 ORTHO05D000020 1.2e-06 55.8 40 60.0
Lj6g0002421 Lotus japonicus HOM05D000233 ORTHO05D000020 1.2e-06 55.8 49 59.2
SGA_v2.0_scaffold100G29706 Striga asiatica HOM05D000233 ORTHO05D000020 1.2e-06 55.8 38 65.8
TPR.G19962 Trifolium pratense HOM05D000233 ORTHO05D000020 1.5e-06 55.5 31 71.0
TWI38G1737 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 1.5e-06 55.5 56 58.9
Peaxi162Scf00243g00102 Petunia axillaris HOM05D000233 ORTHO05D000020 2.0e-06 55.1 34 67.6
Sabra11G0038700 Salix brachista HOM05D000233 ORTHO05D000020 2.0e-06 55.1 32 78.1
Migut.M01117 Erythranthe guttata HOM05D000233 ORTHO05D000020 3.4e-06 54.3 47 55.3
MD05G1311600 Malus domestica HOM05D000233 ORTHO05D000020 3.4e-06 54.3 35 74.3
Sopen02g022700 Solanum pennellii HOM05D000233 ORTHO05D000020 3.4e-06 54.3 45 55.6
TWI38G1117 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 3.4e-06 54.3 57 56.1
arahy.Tifrunner.gnm1.ann1.57AKVM Arachis hypogaea HOM05D000233 ORTHO05D000020 4.5e-06 53.9 41 58.5
Prupe.4G051200 Prunus persica HOM05D000233 ORTHO05D000020 4.5e-06 53.9 29 79.3
PGSC0003DMG400029713 Solanum tuberosum HOM05D000233 ORTHO05D000020 5.9e-06 53.5 45 57.8
FvH4_3g08790 Fragaria vesca HOM05D000233 ORTHO05D000020 7.7e-06 53.1 45 57.8
FAN11G1003 Fragaria x ananassa HOM05D000233 ORTHO05D000020 7.7e-06 53.1 45 57.8
FAN25G2471 Fragaria x ananassa HOM05D000233 ORTHO05D000020 7.7e-06 53.1 45 57.8
Lalb_Chr18g0059441 Lupinus albus HOM05D000233 ORTHO05D000020 7.7e-06 53.1 39 64.1
Oeu064796.1 Olea europaea HOM05D000233 ORTHO05D000020 7.7e-06 53.1 51 56.9
VMungo0540G0264 Vigna mungo HOM05D000233 ORTHO05D000020 7.7e-06 53.1 29 75.9
Ca_00354_v3 Cicer arietinum L. HOM05D000233 ORTHO05D000020 1.0e-05 52.8 29 75.9
DCAR_008019 Daucus carota HOM05D000233 ORTHO05D000020 1.0e-05 52.8 31 71.0
FvH4_7g26410 Fragaria vesca HOM05D000233 ORTHO05D000020 1.0e-05 52.8 47 59.6
FAN06G2220 Fragaria x ananassa HOM05D000233 ORTHO05D000020 1.0e-05 52.8 47 59.6
FAN10G3697 Fragaria x ananassa HOM05D000233 ORTHO05D000020 1.0e-05 52.8 47 59.6
Glyma.13G236600 Glycine max HOM05D000233 ORTHO05D000020 1.0e-05 52.8 29 75.9


User provided reference genes

Program Settings