Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_31368 Corchorus olitorius HOM05D017380 ORTHO05D019049 2.5e-225 785.0 374 100.0
COL.COLO4_31293 Corchorus olitorius HOM05D001422 ORTHO05D001321 1.4e-127 460.3 386 63.2
COL.COLO4_31291 Corchorus olitorius HOM05D017380 ORTHO05D019049 3.1e-127 459.1 370 63.5
COL.COLO4_09953 Corchorus olitorius HOM05D017380 ORTHO05D019049 2.4e-95 353.2 353 54.1
COL.COLO4_31297 Corchorus olitorius HOM05D017380 ORTHO05D019049 7.1e-79 298.5 190 80.0
COL.COLO4_31298 Corchorus olitorius HOM05D017380 ORTHO05D019049 6.3e-51 205.7 132 73.5
SGA_v2.0_scaffold130G34356 Striga asiatica HOM05D017380 ORTHO05D019049 1.2e-33 148.3 236 38.1
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 2.1e-30 137.5 277 33.6
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 2.5e-23 114.0 282 29.4
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 6.8e-21 105.9 318 28.3
COL.COLO4_09257 Corchorus olitorius HOM05D009781 ORTHO05D011819 5.4e-18 96.3 298 27.9
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 4.5e-17 93.2 285 28.4
CSS0005117 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.5e-15 88.2 237 29.1
CSS0046102 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 2.5e-15 87.4 237 30.0
Gohir.A06G044600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 2.5e-15 87.4 225 28.0
CSS0022125 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 3.3e-15 87.0 237 29.1
COL.COLO4_09593 Corchorus olitorius HOM05D014846 ORTHO05D016249 9.5e-15 85.5 281 26.3
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 2.8e-14 84.0 301 26.2
Dinv25049 Davidia involucrata HOM05D011324 ORTHO05D013448 4.0e-13 80.1 341 26.1
COL.COLO4_09850 Corchorus olitorius HOM05D014846 ORTHO05D016249 6.8e-13 79.3 297 25.6
COL.COLO4_24092 Corchorus olitorius HOM05D014846 ORTHO05D016249 6.8e-13 79.3 258 26.7
COL.COLO4_30776 Corchorus olitorius HOM05D014846 ORTHO05D016249 5.7e-12 76.3 197 28.9
vmacro07414 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 4.9e-11 73.2 311 26.0
vmacro07415 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 4.9e-11 73.2 311 26.0
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 4.9e-11 73.2 165 33.9
vmacro22790 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 4.9e-11 73.2 311 26.0
vmacro23393 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 4.9e-11 73.2 311 26.0
vmacro23394 Vaccinium macrocarpon HOM05D012919 ORTHO05D013819 4.9e-11 73.2 311 26.0
Rhsim12G0051600 Rhododendron simsii HOM05D010628 ORTHO05D016249 8.3e-11 72.4 322 25.5
COL.COLO4_09561 Corchorus olitorius HOM05D014846 ORTHO05D016249 2.4e-10 70.9 227 26.4
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.2e-10 70.5 164 33.5
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 3.2e-10 70.5 175 30.9
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 7.0e-10 69.3 272 25.7
Dinv35654 Davidia involucrata HOM05D013363 ORTHO05D015094 7.0e-10 69.3 310 24.2
COL.COLO4_22990 Corchorus olitorius HOM05D017380 ORTHO05D019049 1.2e-09 68.6 151 29.8
Aqoxy6G00478 Aquilegia oxysepala HOM05D000249 ORTHO05D000206 1.6e-09 68.2 266 26.7
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.6e-09 68.2 202 31.7
Rhsim07G0232000 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.0e-09 67.8 278 25.9
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 2.0e-09 67.8 154 32.5
Dinv35477 Davidia involucrata HOM05D013363 ORTHO05D015094 3.5e-09 67.0 300 23.0
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.5e-09 67.0 102 35.3
TAR381G1098 Trochodendron aralioides HOM05D000249 ORTHO05D000206 3.5e-09 67.0 313 24.6
Lsat_1_v5_gn_1_15001 Lactuca sativa HOM05D000249 ORTHO05D000206 5.9e-09 66.2 266 26.3
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 1.3e-08 65.1 203 30.5
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 2.3e-08 64.3 195 30.3
RhsimUnG0033600 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.9e-08 63.9 278 25.5
COL.COLO4_31841 Corchorus olitorius HOM05D017380 ORTHO05D019049 3.9e-08 63.5 58 65.5
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 3.9e-08 63.5 303 24.8
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 3.9e-08 63.5 161 29.2
CSS0013471 Camellia sinensis var. sinensis HOM05D000249 ORTHO05D000206 5.0e-08 63.2 258 26.7
Dinv35834 Davidia involucrata HOM05D013363 ORTHO05D015094 5.0e-08 63.2 120 35.0
BolC2t08508H Brassica oleracea HOM05D000249 ORTHO05D000206 1.9e-07 61.2 178 30.9
Dinv35802 Davidia involucrata HOM05D013363 ORTHO05D015094 2.5e-07 60.8 99 38.4
AL6G12300 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 7.3e-07 59.3 157 31.8
A01p00990 Brassica napus HOM05D000249 ORTHO05D024028 7.3e-07 59.3 115 34.8
BraA01t00097Z Brassica rapa HOM05D000249 ORTHO05D024028 7.3e-07 59.3 115 34.8
A01p08660 Brassica napus HOM05D004751 ORTHO05D000206 9.5e-07 58.9 293 25.6
ATR0564G264 Amborella trichopoda HOM05D000249 ORTHO05D000206 1.2e-06 58.5 137 30.7
AT3G46050 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 2.1e-06 57.8 122 35.2
C02p23780 Brassica napus HOM05D000249 ORTHO05D000206 2.1e-06 57.8 178 29.8
CAN.G65.201 Capsicum annuum HOM05D000249 ORTHO05D000206 2.1e-06 57.8 234 26.5
COL.COLO4_15708 Corchorus olitorius HOM05D014846 ORTHO05D016249 3.6e-06 57.0 129 27.1


User provided reference genes

Program Settings