Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 4.3e-37 157.5 82 100.0
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.1e-31 138.7 79 91.1
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 2.1e-31 138.7 79 91.1
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 2.1e-31 138.7 79 91.1
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.3e-30 135.2 79 89.9
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 1.1e-29 132.9 79 89.9
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 7.3e-29 130.2 78 87.2
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 7.3e-29 130.2 78 87.2
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 3.6e-28 127.9 78 85.9
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 4.8e-28 127.5 79 86.1
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.1e-27 126.3 79 83.5
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 1.8e-27 125.6 82 80.5
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 1.8e-27 125.6 79 81.0
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 2.4e-27 125.2 79 82.3
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 2.4e-27 125.2 79 82.3
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 4.0e-27 124.4 79 83.5
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 4.0e-27 124.4 79 82.3
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 4.0e-27 124.4 79 82.3
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 5.3e-27 124.0 79 82.3
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 9.0e-27 123.2 79 81.0
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 9.0e-27 123.2 79 82.3
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 1.2e-26 122.9 78 82.1
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 2.0e-26 122.1 79 82.3
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 2.0e-26 122.1 79 81.0
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 4.5e-26 120.9 79 83.5
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 5.8e-26 120.6 78 82.1
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 5.8e-26 120.6 78 82.1
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 1.7e-25 119.0 79 81.0
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 2.2e-25 118.6 75 84.0
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 2.2e-25 118.6 79 78.5
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 2.9e-25 118.2 79 79.7
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 3.8e-25 117.9 68 91.2
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 3.8e-25 117.9 72 87.5
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 3.8e-25 117.9 79 79.7
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 4.9e-25 117.5 79 81.0
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 8.4e-25 116.7 82 76.8
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 1.1e-24 116.3 76 81.6
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 1.1e-24 116.3 79 77.2
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 1.4e-24 115.9 72 84.7
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 1.4e-24 115.9 78 78.2
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 1.9e-24 115.5 76 80.3
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 2.4e-24 115.2 78 79.5
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 2.4e-24 115.2 73 83.6
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 2.4e-24 115.2 79 75.9
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 3.2e-24 114.8 76 80.3
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 3.2e-24 114.8 76 81.6
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 3.2e-24 114.8 76 81.6
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 3.2e-24 114.8 76 81.6
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 3.2e-24 114.8 79 75.9
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 3.2e-24 114.8 76 81.6
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 4.2e-24 114.4 79 77.2
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 4.2e-24 114.4 79 75.9
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 4.2e-24 114.4 76 81.6
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 4.2e-24 114.4 75 81.3
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 4.2e-24 114.4 75 81.3
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 4.2e-24 114.4 75 81.3
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 4.2e-24 114.4 78 78.2
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 5.4e-24 114.0 75 81.3
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 5.4e-24 114.0 76 81.6
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 5.4e-24 114.0 76 81.6
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 7.1e-24 113.6 76 81.6
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 7.1e-24 113.6 76 81.6
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 7.1e-24 113.6 76 81.6
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 7.1e-24 113.6 78 76.9
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 7.1e-24 113.6 78 76.9
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 1.2e-23 112.8 79 79.7
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 1.6e-23 112.5 74 83.8
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 2.1e-23 112.1 77 79.2
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 2.1e-23 112.1 75 80.0
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 2.1e-23 112.1 77 77.9
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 2.7e-23 111.7 77 76.6
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 3.5e-23 111.3 72 81.9
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 4.6e-23 110.9 78 74.4
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 4.6e-23 110.9 78 74.4
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 4.6e-23 110.9 81 76.5
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 1.0e-22 109.8 72 81.9
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 2.3e-22 108.6 80 73.8
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 3.0e-22 108.2 79 72.2
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 3.9e-22 107.8 80 76.2
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 3.9e-22 107.8 66 86.4
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 3.9e-22 107.8 66 84.8
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 5.1e-22 107.5 66 86.4
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 8.7e-22 106.7 79 70.9
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 8.7e-22 106.7 80 75.0
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 1.5e-21 105.9 78 76.9
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 1.5e-21 105.9 79 72.2
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 1.5e-21 105.9 77 74.0
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 1.9e-21 105.5 75 74.7
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 1.9e-21 105.5 77 74.0
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 2.5e-21 105.1 78 74.4
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 2.5e-21 105.1 77 74.0
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 2.5e-21 105.1 70 74.3
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 3.3e-21 104.8 78 73.1
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 4.3e-21 104.4 78 73.1
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 4.3e-21 104.4 77 72.7
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 7.4e-21 103.6 79 69.6
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 9.6e-21 103.2 79 70.9
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 9.6e-21 103.2 67 82.1
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 1.3e-20 102.8 73 74.0
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 1.3e-20 102.8 78 70.5
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 1.6e-20 102.4 74 79.7
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 1.6e-20 102.4 80 71.2
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 2.1e-20 102.1 72 75.0
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 2.8e-20 101.7 79 68.4
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 2.8e-20 101.7 75 73.3
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 4.8e-20 100.9 79 68.4
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 4.8e-20 100.9 79 69.6
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 8.1e-20 100.1 81 70.4
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 8.1e-20 100.1 80 71.2
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 1.1e-19 99.8 77 68.8
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 1.4e-19 99.4 79 70.9
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 4.0e-19 97.8 79 69.6
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 4.0e-19 97.8 79 69.6
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 6.9e-19 97.1 72 72.2
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 4.5e-18 94.4 67 77.6
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 5.8e-18 94.0 79 68.4
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 7.6e-18 93.6 74 68.9
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 2.2e-17 92.0 75 69.3
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 7.9e-15 83.6 52 84.6
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 2.3e-14 82.0 77 63.6
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 1.5e-13 79.3 57 75.4
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 9.6e-13 76.6 70 60.0
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 1.3e-12 76.3 62 69.4
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 1.6e-12 75.9 62 69.4
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 2.1e-12 75.5 65 66.2
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 6.2e-12 73.9 62 67.7
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 1.4e-11 72.8 66 65.2
Nn3g19836 Nelumbo nucifera HOM05D005954 ORTHO05D007347 1.9e-08 62.4 44 72.7


User provided reference genes

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