Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 7.8e-189 663.7 346 100.0
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 1.4e-137 493.4 342 78.1
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 2.2e-135 486.1 343 75.5
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 1.8e-113 413.3 342 66.4
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.2e-112 410.6 342 65.8
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 1.3e-111 407.1 342 65.5
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 6.1e-93 345.1 342 60.2
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 8.3e-82 308.1 341 54.0
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 1.4e-81 307.4 254 61.4
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 1.6e-80 303.9 341 51.0
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 3.5e-80 302.8 339 49.6
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 3.5e-80 302.8 331 51.4
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 1.0e-79 301.2 285 54.7
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 2.3e-79 300.1 321 51.7
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 8.6e-79 298.1 320 51.9
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 1.5e-78 297.4 318 52.5
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 1.9e-78 297.0 324 50.9
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 9.5e-78 294.7 345 51.9
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.2e-77 294.3 341 52.2
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 1.6e-77 293.9 274 55.8
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.1e-77 293.5 345 51.9
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 1.1e-76 291.2 345 51.3
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 3.1e-76 289.7 273 54.2
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 1.1e-73 281.2 345 49.3
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 1.9e-73 280.4 329 49.5
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 2.7e-72 276.6 299 52.2
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 3.0e-71 273.1 277 53.4
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 3.9e-71 272.7 317 49.2
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 1.5e-70 270.8 305 49.5
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 1.9e-70 270.4 348 48.0
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 3.3e-70 269.6 289 50.2
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 5.6e-70 268.9 344 49.4
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 1.2e-69 267.7 302 48.7
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 1.6e-69 267.3 287 50.5
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 2.1e-69 266.9 327 49.8
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 3.6e-69 266.2 323 48.3
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 1.4e-68 264.2 312 48.4
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 1.4e-68 264.2 283 50.2
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 1.8e-68 263.8 359 46.5
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 2.3e-68 263.5 277 52.3
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 8.9e-68 261.5 344 47.7
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 5.8e-67 258.8 278 50.4
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 2.2e-66 256.9 269 51.7
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 8.3e-66 255.0 263 52.9
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 1.4e-65 254.2 271 50.2
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 2.4e-65 253.4 227 57.3
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 3.2e-65 253.1 265 51.3
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 7.1e-65 251.9 282 50.0
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 7.8e-64 248.4 238 53.4
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 1.0e-63 248.1 349 45.6
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 1.0e-63 248.1 308 47.4
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 1.7e-63 247.3 262 50.4
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 1.7e-63 247.3 352 44.0
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 2.3e-63 246.9 342 45.9
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 8.6e-63 245.0 304 46.1
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 2.5e-62 243.4 309 46.9
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 2.5e-62 243.4 341 44.9
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 4.3e-62 242.7 348 44.0
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 9.5e-62 241.5 169 68.0
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 9.5e-62 241.5 273 49.8
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 1.6e-61 240.7 284 46.8
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 2.1e-61 240.4 352 43.8
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 2.4e-60 236.9 332 45.5
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 3.1e-60 236.5 292 45.5
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 1.2e-59 234.6 265 48.7
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 1.5e-59 234.2 257 50.6
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 2.0e-59 233.8 177 67.2
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 5.8e-59 232.3 320 43.1
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 6.4e-58 228.8 348 41.4
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 3.2e-57 226.5 320 42.8
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 9.2e-57 224.9 299 42.8
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 1.6e-56 224.2 344 43.3
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 2.7e-56 223.4 259 48.3
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 4.6e-56 222.6 297 42.8
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 6.0e-56 222.2 334 42.5
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 1.1e-54 218.0 264 46.6
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 3.3e-54 216.5 305 44.3
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 9.6e-54 214.9 313 43.8
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 1.4e-52 211.1 169 63.3
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 2.4e-52 210.3 311 43.1
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 3.1e-52 209.9 342 42.7
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 4.0e-52 209.5 271 46.5
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 5.3e-52 209.1 262 45.4
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 2.6e-51 206.8 337 42.4
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 2.6e-51 206.8 223 49.3
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 4.4e-51 206.1 346 40.2
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 5.8e-51 205.7 179 58.7
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 2.2e-50 203.8 317 43.2
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 7.1e-49 198.7 341 40.5
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.2e-48 198.0 139 69.1
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 3.5e-48 196.4 341 40.5
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 1.9e-46 190.7 341 40.2
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 3.3e-46 189.9 341 40.2
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 1.6e-45 187.6 172 52.9
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 2.0e-43 180.6 276 43.1
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 9.9e-43 178.3 347 38.0
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 1.9e-41 174.1 303 38.9
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 9.3e-41 171.8 316 39.2
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 3.3e-38 163.3 209 44.0
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 2.1e-37 160.6 173 46.8
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 2.0e-35 154.1 169 49.1
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 3.8e-34 149.8 354 34.2
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 1.0e-31 141.7 234 37.6
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 3.0e-31 140.2 129 53.5
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 3.7e-29 133.3 167 40.7
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 8.2e-29 132.1 161 43.5
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 3.4e-27 126.7 155 43.2
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 5.1e-23 112.8 89 61.8
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 1.5e-22 111.3 89 59.6
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 6.5e-18 95.9 93 52.7
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 1.8e-15 87.8 119 41.2
vmacro04187 Vaccinium macrocarpon HOM05D006050 ORTHO05D030710 4.3e-14 83.2 175 36.0
Cpa.g.sc166.16 Carica papaya HOM05D006050 ORTHO05D007457 1.3e-13 81.6 91 46.2
CSS0038270 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.2e-11 75.1 77 49.4


User provided reference genes

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